BDGP Sequence Production Resources |
Search the DGRC for FI04125
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 41 |
Well: | 25 |
Vector: | pBS SK- |
Associated Gene/Transcript | nrv1-RA |
Protein status: | FI04125.pep: gold |
Sequenced Size: | 1914 |
Gene | Date | Evidence |
---|---|---|
nrv1 | 2008-12-18 | 5.12 accounting |
1914 bp assembled on 2008-09-12
GenBank Submission: BT044185.1
> FI04125.complete CAACACGCAGCACGCATCGCCATTCGCAGTCGCAGGAAGCAGGGAAACCA AGAGTTGGCAACAACTTCTCGTGGCTCCCAGCCCGTTTGTTTGTGCTTCT GATTCGGCTTATTTCGCCCAAAATCGGTTCTAACTTATTTTCCTAACTCT AAGACCAGTCGAGCAGTCGAGGCGCAAATAATTGCATAATTACACGTTTT TCAAAAATATTCAAGAGTACTGCGAGTGCGAAAATAAATGAGAATTCAGT TTCGAGTCTGCTGAATCATCGCATATACACAGCACAACGTATACATAAAT CAGTTTTCGTAGCCTTCGCGCCGTCCACGTCATCAACGAAAAGTATAAAC CAAATTTTCGAATCGAATCGAATACTGAAAAGCTAACCGTAAACAAGTGC GAAAGAACAGCGCCGCAATGTCAAAGAATAACGGAAAGGGCGCCAAAGGC GAATTCGAATTCCCGCAGCCAGCGAAGAAGCAAACCTTCTCGGAAATGAT CTACAATCCCCAGGAAGGCACCTTCTTCGGACGCACCGGAAAAAGTTGGA GTCAGCTACTGCTGTTCTACACAATCTTCTACATCGTTCTGGCCGCCCTC TTCACCATTTGCATGCAGGGTCTTCTGTCCACCATCAGCGATACGGAACC CAAGTGGAAGCTGCAAGACTCGCTGATAGGCACCAATCCCGGCCTGGGAT TCCGTCCATTGAGTGAGCAGACCGAGCGAGGATCGGTGATCGCCTTCGAT GGCAAGAAACCGGCCGAGAGCGATTACTGGATCGAGCTGATTGATGACTT CCTCCGGGACTACAACCACACCGAGGGACGGGATATGAAGCACTGCGGCT TCGGTCAGGTCCTCGAACCCACGGATGTGTGTGTGGTGAACACGGATCTG TTTGGCGGCTGTTCCAAGGCCAATAACTATGGCTACAAGACGAACCAGCC CTGCATATTCTTGAAGCTGAATAAGATCTTTGGCTGGATTCCGGAAGTGT ACGATAAGGAGGAGAAGGATATGCCTGATGATCTGAAAAAGGTGATCAAT GAGACGAAAACGGAGGAGCGGCAGCAAGTCTGGGTGAGCTGCAACGGTCA CTTGGGCAAGGACAAGGAGAACTTCCAGAACATCCGCTACTTCCCCAGCC AAGGGTTCCCAAGCTACTACTACCCGTTCCTGAACCAGCCGGGTTACCTG AGTCCGCTGGTGGCCGTGCAGTTCAACTCCCCGCCCAAGGGTCAAATGCT GGACGTGGAGTGCCGTGCCTGGGCCAAGAATATTCAGTACAGTGGCAGTG TCCGCGATCGCAAGGGCTCCGTGACCTTCCAGATCCTCCTGGACTAAGTG CGGGGAATGGGAATCATGTCGCCAACTTGTGATCGCAGCAGCAAATACTA GCCGTATTCTGGGCGAGGATATGGCAAACCGCGTCGGAGACCAACTACCA CCTACCTTACTGAAAGAGATATACACATATGCAGATATAGATATATATAT ATATATATGGAATGAGCTAGCGACCTTAGGTTTTCAAGTGTATTGTATAT ATTTATACGAAGGAATGATCCGACCGATCGTCAATTGAACTCTGAACATC TGGCCTAATAGAGAAATAGAAAGTCGAAAATCTTGAAATTAAAGTTCAAA TCGTACACACGCAATTGTTGTTATAGCTTTTAGCTTGTCTATTGCTATCA GTTATTATTATTAATATTTATCATATTATTTCATTATGAATTCTTGTAAT TACGATCATTATTTTCTGTCAGTTGTATTTAGTTTTAATTTATAAATGTT GAAACATGCCCGAAAAATTCTTTGTTTCCCGCACATCGCCTAGGCTTGTT CAATTTGTACAAAGAAGCAACTAAATAAATTATAATTGTTAAATGTAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nrv1-RA | 2236 | nrv1-RA | 65..1961 | 1..1897 | 9485 | 100 | Plus |
nrv1.b | 2185 | nrv1.b | 26..1916 | 1..1897 | 9370 | 99.6 | Plus |
nrv1.a | 2136 | nrv1.a | 368..1867 | 398..1897 | 7500 | 100 | Plus |
nrv1.a | 2136 | nrv1.a | 26..367 | 1..342 | 1710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6777863..6778692 | 1896..1067 | 4120 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 6785319..6785870 | 552..1 | 2760 | 100 | Minus |
chr2L | 23010047 | chr2L | 6778751..6779011 | 1068..808 | 1305 | 100 | Minus |
chr2L | 23010047 | chr2L | 6779071..6779328 | 808..551 | 1290 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6778823..6779653 | 1897..1067 | 4155 | 100 | Minus |
2L | 23513712 | 2L | 6786280..6786831 | 552..1 | 2760 | 100 | Minus |
2L | 23513712 | 2L | 6779712..6779972 | 1068..808 | 1305 | 100 | Minus |
2L | 23513712 | 2L | 6780032..6780289 | 808..551 | 1290 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6778823..6779653 | 1897..1067 | 4155 | 100 | Minus |
2L | 23513712 | 2L | 6786280..6786831 | 552..1 | 2760 | 100 | Minus |
2L | 23513712 | 2L | 6779712..6779972 | 1068..808 | 1305 | 100 | Minus |
2L | 23513712 | 2L | 6780032..6780289 | 808..551 | 1290 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6779071..6779328 | 551..808 | 100 | <- | Minus |
chr2L | 6777863..6777995 | 1764..1896 | 100 | == | Minus |
chr2L | 6778070..6778690 | 1069..1689 | 93 | <- | Minus |
chr2L | 6778751..6779010 | 809..1068 | 100 | <- | Minus |
chr2L | 6785321..6785870 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 1..930 | 418..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 1..930 | 418..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 1..930 | 418..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 1..930 | 418..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 26..1921 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 26..1921 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 31..1926 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 26..1921 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv1-RA | 31..1926 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6778824..6779651 | 1069..1896 | 100 | <- | Minus |
2L | 6779712..6779971 | 809..1068 | 100 | <- | Minus |
2L | 6780032..6780289 | 551..808 | 100 | <- | Minus |
2L | 6786282..6786831 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6778824..6779651 | 1069..1896 | 100 | <- | Minus |
2L | 6779712..6779971 | 809..1068 | 100 | <- | Minus |
2L | 6780032..6780289 | 551..808 | 100 | <- | Minus |
2L | 6786282..6786831 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6778824..6779651 | 1069..1896 | 100 | <- | Minus |
2L | 6779712..6779971 | 809..1068 | 100 | <- | Minus |
2L | 6780032..6780289 | 551..808 | 100 | <- | Minus |
2L | 6786282..6786831 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6778824..6779651 | 1069..1896 | 100 | <- | Minus |
arm_2L | 6779712..6779971 | 809..1068 | 100 | <- | Minus |
arm_2L | 6780032..6780289 | 551..808 | 100 | <- | Minus |
arm_2L | 6786282..6786831 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6780032..6780289 | 551..808 | 100 | <- | Minus |
2L | 6778824..6779651 | 1069..1896 | 100 | <- | Minus |
2L | 6779712..6779971 | 809..1068 | 100 | <- | Minus |
2L | 6786282..6786831 | 1..550 | 100 | Minus |
Translation from 417 to 1346
> FI04125.pep MSKNNGKGAKGEFEFPQPAKKQTFSEMIYNPQEGTFFGRTGKSWSQLLLF YTIFYIVLAALFTICMQGLLSTISDTEPKWKLQDSLIGTNPGLGFRPLSE QTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHTEGRDMKHCGFGQVLE PTDVCVVNTDLFGGCSKANNYGYKTNQPCIFLKLNKIFGWIPEVYDKEEK DMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFPSQGFPSY YYPFLNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDRKG SVTFQILLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14480-PA | 309 | GF14480-PA | 1..309 | 1..309 | 1430 | 84.5 | Plus |
Dana\GF14479-PA | 323 | GF14479-PA | 20..323 | 16..309 | 647 | 41.8 | Plus |
Dana\GF14332-PA | 311 | GF14332-PA | 7..311 | 11..309 | 612 | 38.6 | Plus |
Dana\GF18472-PA | 378 | GF18472-PA | 27..260 | 19..289 | 184 | 24.5 | Plus |
Dana\GF18471-PA | 386 | GF18471-PA | 28..273 | 20..306 | 172 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23582-PA | 309 | GG23582-PA | 1..309 | 1..309 | 1563 | 93.2 | Plus |
Dere\GG23580-PA | 323 | GG23580-PA | 20..323 | 16..309 | 639 | 40.8 | Plus |
Dere\GG21302-PA | 311 | GG21302-PA | 7..311 | 11..309 | 611 | 39 | Plus |
Dere\GG21303-PA | 204 | GG21303-PA | 10..204 | 115..309 | 391 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10787-PA | 309 | GH10787-PA | 1..309 | 1..309 | 1189 | 68.3 | Plus |
Dgri\GH10786-PA | 323 | GH10786-PA | 20..323 | 16..309 | 667 | 41.8 | Plus |
Dgri\GH13318-PA | 311 | GH13318-PA | 7..311 | 11..309 | 585 | 38.3 | Plus |
Dgri\GH22397-PA | 277 | GH22397-PA | 27..276 | 19..308 | 211 | 25.3 | Plus |
Dgri\GH22396-PA | 310 | GH22396-PA | 139..282 | 164..289 | 155 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nrv1-PB | 309 | CG9258-PB | 1..309 | 1..309 | 1679 | 100 | Plus |
nrv1-PA | 309 | CG9258-PA | 1..309 | 1..309 | 1679 | 100 | Plus |
nrv2-PG | 323 | CG9261-PG | 20..323 | 16..309 | 654 | 42.2 | Plus |
nrv2-PF | 323 | CG9261-PF | 20..323 | 16..309 | 654 | 42.2 | Plus |
nrv2-PC | 323 | CG9261-PC | 20..323 | 16..309 | 654 | 42.2 | Plus |
nrv2-PE | 322 | CG9261-PE | 22..322 | 16..309 | 639 | 42.5 | Plus |
nrv2-PA | 322 | CG9261-PA | 22..322 | 16..309 | 639 | 42.5 | Plus |
nrv2-PD | 322 | CG9261-PD | 22..322 | 16..309 | 639 | 42.5 | Plus |
nrv3-PD | 311 | CG8663-PD | 7..311 | 11..309 | 615 | 39 | Plus |
nrv3-PC | 311 | CG8663-PC | 7..311 | 11..309 | 615 | 39 | Plus |
nrv3-PA | 311 | CG8663-PA | 7..311 | 11..309 | 615 | 39 | Plus |
nrv3-PE | 313 | CG8663-PE | 7..313 | 11..309 | 601 | 38.7 | Plus |
CG11703-PA | 353 | CG11703-PA | 28..258 | 20..289 | 230 | 24.9 | Plus |
CG33310-PB | 876 | CG33310-PB | 575..857 | 12..308 | 174 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17299-PA | 309 | GI17299-PA | 1..309 | 1..309 | 1299 | 76.4 | Plus |
Dmoj\GI17298-PA | 323 | GI17298-PA | 20..323 | 16..309 | 648 | 41.8 | Plus |
Dmoj\GI12264-PA | 310 | GI12264-PA | 7..310 | 11..309 | 625 | 40.7 | Plus |
Dmoj\GI16930-PA | 276 | GI16930-PA | 32..263 | 24..293 | 154 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25961-PA | 309 | GL25961-PA | 1..309 | 1..309 | 1397 | 80.9 | Plus |
Dper\GL25223-PA | 321 | GL25223-PA | 10..321 | 3..309 | 931 | 55.6 | Plus |
Dper\GL25960-PA | 323 | GL25960-PA | 20..323 | 16..309 | 638 | 41.2 | Plus |
Dper\GL26665-PA | 311 | GL26665-PA | 7..311 | 11..309 | 600 | 39 | Plus |
Dper\GL11976-PA | 625 | GL11976-PA | 137..276 | 161..308 | 148 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21650-PA | 309 | GA21650-PA | 1..309 | 1..309 | 1393 | 80.6 | Plus |
Dpse\GA22950-PA | 321 | GA22950-PA | 10..321 | 3..309 | 925 | 55.3 | Plus |
Dpse\GA21652-PA | 323 | GA21652-PA | 20..323 | 16..309 | 637 | 41.2 | Plus |
Dpse\GA21243-PA | 311 | GA21243-PA | 7..311 | 11..309 | 600 | 39 | Plus |
Dpse\GA11151-PA | 623 | GA11151-PA | 137..276 | 161..308 | 149 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13836-PA | 309 | GM13836-PA | 1..309 | 1..309 | 1627 | 98.1 | Plus |
Dsec\GM13825-PA | 323 | GM13825-PA | 20..323 | 16..309 | 655 | 42.2 | Plus |
Dsec\GM23414-PA | 311 | GM23414-PA | 7..311 | 11..309 | 611 | 39 | Plus |
Dsec\GM26920-PA | 347 | GM26920-PA | 28..258 | 20..289 | 223 | 24.5 | Plus |
Dsec\GM26919-PA | 311 | GM26919-PA | 139..281 | 164..289 | 151 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22541-PA | 309 | GD22541-PA | 1..309 | 1..309 | 1645 | 98.7 | Plus |
Dsim\GD22540-PA | 340 | GD22540-PA | 20..340 | 16..309 | 637 | 40.2 | Plus |
Dsim\GD20125-PA | 347 | GD20125-PA | 28..258 | 20..289 | 223 | 24.5 | Plus |
Dsim\GD20124-PA | 311 | GD20124-PA | 139..281 | 164..289 | 150 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15669-PA | 309 | GJ15669-PA | 1..309 | 1..309 | 1262 | 73.5 | Plus |
Dvir\GJ15658-PA | 323 | GJ15658-PA | 20..323 | 16..309 | 657 | 41.5 | Plus |
Dvir\GJ17853-PA | 311 | GJ17853-PA | 7..311 | 11..309 | 609 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24211-PA | 309 | GK24211-PA | 1..309 | 1..309 | 1340 | 76.4 | Plus |
Dwil\GK24210-PA | 323 | GK24210-PA | 20..323 | 16..309 | 663 | 42.2 | Plus |
Dwil\GK18742-PA | 311 | GK18742-PA | 7..311 | 11..309 | 603 | 38.6 | Plus |
Dwil\GK13483-PA | 345 | GK13483-PA | 22..257 | 14..290 | 169 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18403-PA | 309 | GE18403-PA | 1..309 | 1..309 | 1577 | 93.9 | Plus |
Dyak\GE18402-PA | 323 | GE18402-PA | 20..323 | 16..309 | 650 | 41.8 | Plus |
Dyak\GE12918-PA | 311 | GE12918-PA | 7..311 | 11..309 | 615 | 39 | Plus |
Dyak\GE25144-PA | 348 | GE25144-PA | 28..274 | 20..309 | 209 | 23.3 | Plus |
Dyak\GE25143-PA | 311 | GE25143-PA | 50..281 | 46..289 | 148 | 25.6 | Plus |
Translation from 417 to 1346
> FI04125.hyp MSKNNGKGAKGEFEFPQPAKKQTFSEMIYNPQEGTFFGRTGKSWSQLLLF YTIFYIVLAALFTICMQGLLSTISDTEPKWKLQDSLIGTNPGLGFRPLSE QTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHTEGRDMKHCGFGQVLE PTDVCVVNTDLFGGCSKANNYGYKTNQPCIFLKLNKIFGWIPEVYDKEEK DMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFPSQGFPSY YYPFLNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDRKG SVTFQILLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nrv1-PB | 309 | CG9258-PB | 1..309 | 1..309 | 1679 | 100 | Plus |
nrv1-PA | 309 | CG9258-PA | 1..309 | 1..309 | 1679 | 100 | Plus |
nrv2-PG | 323 | CG9261-PG | 20..323 | 16..309 | 654 | 42.2 | Plus |
nrv2-PF | 323 | CG9261-PF | 20..323 | 16..309 | 654 | 42.2 | Plus |
nrv2-PC | 323 | CG9261-PC | 20..323 | 16..309 | 654 | 42.2 | Plus |