Clone FI04406 Report

Search the DGRC for FI04406

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:6
Vector:pFlc-1
Associated Gene/TranscriptCG17633-RA
Protein status:FI04406.pep: gold
Sequenced Size:1361

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17633 2008-12-18 5.12 accounting

Clone Sequence Records

FI04406.complete Sequence

1361 bp assembled on 2008-09-24

GenBank Submission: BT044573.1

> FI04406.complete
AAAAACCAACGACAACGATGTCGCTGAACAAGTGCCTTCTATTCGCCCTC
CTGGCCATCGTGGCCAGCGCATCCGTGAGCGCGGAACGTGTTCGCTATGA
CAACTACCGCATGTACAAGGTCAACTCGGAGAATGCCAAGCAACTGGAGG
TGCTGAAGGATCTCGAGGGATCCAGCGACTCAATCATGTTCTTGGATGGC
GTTCATCTGGTTGGTGCCGATATTCAGATAATCGTGGCTCCCCACAAGGT
GCCCGACTTCCTGGAGATTCTGGGCAAGTCTGAAATCAAGTATGAGCTGC
AATCGCGCGATGTGCAAAAGTCTCTGGACGAGATCGACGAGAAGGTCGCT
ATCAAGGGACGTGCCACCACCGCCTACAACTGGGCCCAGTACTACGAACT
CGACGACACCTATGCCTGGCTCCAGTCCCTGGCCCAGACGAATCCCGGAG
TGGTCACCCTCATTGAGGGCGGCAAGACCTACCAGGGACGCTCCATCCTC
GGTGTTAAGATCACCAAGGGAGGTGAGACCATAAACGGCAAGGCCAAGCC
CGGCATCTTCCTGGAGGCCGGTATCCATGCCCGCGAGTGGATTGCTCCAG
CTGCCGCCACCTTTATCATCAACCAACTGCTGACCTCCGAGGTGGAGAAC
ATCAAGGAATTGGCCGAGAACTACACCTGGTACGTCCTGCCCCACGCCAA
TCCCGATGGCTATGTCTACACCCACACCACGAATCGCTTGTGGCGCAAGA
CCCGTACTCCCTACGGCAGCTGCTTCGGCGCCGATCCCAACAGGAACTGG
GGCTTCCACTGGAACGAGGTGGGTGCCAGCAGCAGTGCCTGCTCCGATAC
CTACGCCGGACCTTCCGCTTTCTCTGAGATCGAGACACTGTCACTGTCCA
AGTTCATTGAGGGACTGAAGGGCAAGGTCCAGCTGTACCTCTCGCTGCAT
GCCTACTCCCAATACCTGCTGTATCCCTATGGACACACCTCTGATCTGCC
TGACAATGTGGCCGACTTTGAGAAGGTCTTCGATGCCTCCATTGCAGCCG
TGAACAAGCGTTACGGTACCACGTACACTGGAGGCAACATTTACGATGCC
ATCTACCCAGCGGCTGGTGCCAGTGTGGACTGGGCCTACGGAACCCAGGA
TGTGCGCATGGCCTTCTGCTATGAACTGCGTCCCTCGTCGACCTCCTACC
TCACCGGATTCAAGCTTCCCGCCGAGCAAATCGTACCCGCCAGCGAGGAG
CTGCTTGACTCCATCGTGGCCATGGCCACCGAGGTCAAGAGCCTGGGCTA
CTTTGACTAAGCGACACTAATAAAGTACTCACAGCTTTTCGGCACAAAAA
AAAAAAAAAAA

FI04406.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG17633-RA 1349 CG17633-RA 3..1344 3..1344 6710 100 Plus
CG4017-RA 1664 CG4017-RA 693..766 678..751 220 86.4 Plus
CG4017-RA 1664 CG4017-RA 952..1025 934..1007 160 81 Plus
CG4017-RA 1664 CG4017-RA 1091..1153 1073..1135 150 82.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9767907..9769248 3..1344 6710 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9769069..9770410 3..1344 6710 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9769069..9770410 3..1344 6710 100 Plus
2L 23513712 2L 9768018..9768091 934..1007 160 81 Plus
2L 23513712 2L 9768157..9768219 1073..1135 150 82.5 Plus
2L 23513712 2L 9767705..9767753 678..726 140 85.7 Plus
Blast to na_te.dros performed on 2019-03-16 17:10:48 has no hits.

FI04406.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:11:52 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9767905..9769248 1..1345 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:47:34 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 1..1293 18..1310 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:13:37 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 1..1293 18..1310 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:30:29 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 1..1293 18..1310 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:53:32 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 1..1293 18..1310 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:51:41 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 3..1344 3..1345 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:13:37 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 3..1344 3..1345 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:30:29 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 8..1350 1..1343 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 18:42:13 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 3..1344 3..1345 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:53:32 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
CG17633-RA 8..1350 1..1343 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:11:52 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9769067..9770410 1..1345 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:11:52 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9769067..9770410 1..1345 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:11:52 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9769067..9770410 1..1345 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:30:29 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9769067..9770410 1..1345 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:44:12 Download gff for FI04406.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9769067..9770410 1..1345 99   Plus

FI04406.pep Sequence

Translation from 2 to 1309

> FI04406.pep
KPTTTMSLNKCLLFALLAIVASASVSAERVRYDNYRMYKVNSENAKQLEV
LKDLEGSSDSIMFLDGVHLVGADIQIIVAPHKVPDFLEILGKSEIKYELQ
SRDVQKSLDEIDEKVAIKGRATTAYNWAQYYELDDTYAWLQSLAQTNPGV
VTLIEGGKTYQGRSILGVKITKGGETINGKAKPGIFLEAGIHAREWIAPA
AATFIINQLLTSEVENIKELAENYTWYVLPHANPDGYVYTHTTNRLWRKT
RTPYGSCFGADPNRNWGFHWNEVGASSSACSDTYAGPSAFSEIETLSLSK
FIEGLKGKVQLYLSLHAYSQYLLYPYGHTSDLPDNVADFEKVFDASIAAV
NKRYGTTYTGGNIYDAIYPAAGASVDWAYGTQDVRMAFCYELRPSSTSYL
TGFKLPAEQIVPASEELLDSIVAMATEVKSLGYFD*

FI04406.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:51:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22810-PA 427 GF22810-PA 1..426 6..435 1903 84 Plus
Dana\GF22809-PA 426 GF22809-PA 3..411 12..424 1175 52.8 Plus
Dana\GF11227-PA 432 GF11227-PA 31..431 28..434 806 39.3 Plus
Dana\GF18768-PA 452 GF18768-PA 45..452 24..435 788 37.6 Plus
Dana\GF14014-PA 428 GF14014-PA 1..423 6..434 757 37.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:51:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10055-PA 429 GG10055-PA 1..429 6..435 2138 91.2 Plus
Dere\GG10054-PA 427 GG10054-PA 21..414 27..424 1122 51.7 Plus
Dere\GG10693-PA 417 GG10693-PA 10..416 23..434 815 39 Plus
Dere\GG12438-PA 453 GG12438-PA 52..452 29..434 764 36.8 Plus
Dere\GG23518-PA 429 GG23518-PA 25..423 28..434 762 39.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25145-PA 426 GH25145-PA 1..426 6..435 1826 78.4 Plus
Dgri\GH25146-PA 426 GH25146-PA 1..426 6..435 1823 78.2 Plus
Dgri\GH22018-PA 440 GH22018-PA 34..439 24..434 794 37.7 Plus
Dgri\GH19989-PA 441 GH19989-PA 36..440 27..434 781 37.7 Plus
Dgri\GH10072-PA 421 GH10072-PA 6..420 13..433 773 38.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17633-PA 430 CG17633-PA 1..430 6..435 2242 100 Plus
CG4017-PA 424 CG4017-PA 3..411 12..424 1106 50.1 Plus
CG2915-PA 453 CG2915-PA 51..452 28..434 814 39.5 Plus
CG2915-PB 453 CG2915-PB 51..452 28..434 814 39.5 Plus
CG7025-PA 429 CG7025-PA 1..422 6..433 766 38.4 Plus
CG4408-PB 467 CG4408-PB 66..466 29..434 740 37.7 Plus
CG4408-PA 479 CG4408-PA 78..478 29..434 740 37.7 Plus
CG18585-PB 422 CG18585-PB 6..421 13..433 735 37.4 Plus
CG18585-PA 422 CG18585-PA 6..421 13..433 735 37.4 Plus
CG14820-PA 416 CG14820-PA 1..413 12..431 683 34.1 Plus
CG8560-PB 418 CG8560-PB 4..414 13..428 678 37.1 Plus
CG8560-PA 418 CG8560-PA 4..414 13..428 678 37.1 Plus
CG8562-PA 424 CG8562-PA 7..420 16..428 638 36.4 Plus
CG12374-PA 422 CG12374-PA 6..422 12..435 612 33.9 Plus
CG18417-PA 427 CG18417-PA 6..420 12..428 575 35.1 Plus
CG3108-PA 1132 CG3108-PA 722..1094 31..410 572 33.9 Plus
CG3097-PA 445 CG3097-PA 4..440 10..432 502 28.3 Plus
CG32379-PB 344 CG32379-PB 44..338 130..428 483 36.4 Plus
CG8945-PC 1430 CG8945-PC 978..1426 29..424 466 28.3 Plus
CG8563-PB 440 CG8563-PB 7..437 11..428 427 25.8 Plus
CG8563-PA 440 CG8563-PA 7..437 11..428 427 25.8 Plus
CG42264-PB 521 CG42264-PB 108..521 41..429 405 24.4 Plus
CG42264-PA 634 CG42264-PA 219..634 31..429 403 24.4 Plus
CG8539-PB 385 CG8539-PB 16..333 108..425 383 31.2 Plus
CG8539-PA 385 CG8539-PA 16..333 108..425 383 31.2 Plus
CG8564-PA 504 CG8564-PA 123..350 185..416 331 35.3 Plus
CG8564-PC 520 CG8564-PC 139..366 185..416 331 35.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20119-PA 426 GI20119-PA 1..425 6..434 1821 78.6 Plus
Dmoj\GI20130-PA 426 GI20130-PA 1..426 6..435 1814 78.7 Plus
Dmoj\GI20107-PA 426 GI20107-PA 1..426 6..435 1783 75.9 Plus
Dmoj\GI15622-PA 426 GI15622-PA 1..426 6..435 1450 61.5 Plus
Dmoj\GI22046-PA 447 GI22046-PA 27..446 11..434 788 36.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18934-PA 425 GL18934-PA 1..425 6..435 1908 83.7 Plus
Dper\GL18933-PA 426 GL18933-PA 16..423 25..433 1163 51.1 Plus
Dper\GL10609-PA 428 GL10609-PA 14..428 16..435 801 36.9 Plus
Dper\GL13854-PA 434 GL13854-PA 57..433 54..434 764 39.1 Plus
Dper\GL18860-PA 429 GL18860-PA 16..424 19..435 744 39.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14587-PA 425 GA14587-PA 1..425 6..435 1917 84 Plus
Dpse\GA17870-PA 426 GA17870-PA 19..423 28..433 1165 51.5 Plus
Dpse\GA26945-PA 434 GA26945-PA 18..433 14..434 815 38.2 Plus
Dpse\GA15515-PA 428 GA15515-PA 14..428 16..435 801 36.9 Plus
Dpse\GA20041-PA 429 GA20041-PA 8..424 11..435 764 40 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17695-PA 429 GM17695-PA 1..429 6..435 2199 95.3 Plus
Dsec\GM17686-PA 424 GM17686-PA 3..411 12..424 1134 50.4 Plus
Dsec\GM20741-PA 429 GM20741-PA 27..428 28..434 828 39.5 Plus
Dsec\GM13458-PA 429 GM13458-PA 8..423 12..434 765 38.2 Plus
Dsec\GM13467-PA 422 GM13467-PA 6..422 13..434 750 38.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23629-PA 430 GD23629-PA 1..430 6..435 2253 97.2 Plus
Dsim\GD23628-PA 424 GD23628-PA 3..411 12..424 1137 50.8 Plus
Dsim\GD10206-PA 427 GD10206-PA 27..426 28..434 797 39.2 Plus
Dsim\GD22481-PA 429 GD22481-PA 8..423 12..434 764 38 Plus
Dsim\GD22482-PA 422 GD22482-PA 6..422 13..434 738 37.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13502-PA 426 GJ13502-PA 1..426 6..435 1841 78.7 Plus
Dvir\GJ13514-PA 426 GJ13514-PA 23..426 27..435 1827 80.7 Plus
Dvir\GJ22238-PA 426 GJ22238-PA 24..425 28..434 805 37.8 Plus
Dvir\GJ16227-PA 430 GJ16227-PA 7..426 11..435 784 39.9 Plus
Dvir\GJ24099-PA 446 GJ24099-PA 27..445 9..434 783 36.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24194-PA 426 GK24194-PA 1..426 6..435 1891 81.9 Plus
Dwil\GK24193-PA 421 GK24193-PA 13..419 19..431 1165 51.2 Plus
Dwil\GK13162-PA 446 GK13162-PA 44..443 31..434 825 39.3 Plus
Dwil\GK23952-PA 418 GK23952-PA 8..417 12..433 798 40.6 Plus
Dwil\GK15729-PA 433 GK15729-PA 25..432 22..434 797 38.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18869-PA 430 GE18869-PA 1..430 6..435 2181 93.5 Plus
Dyak\GE18868-PA 424 GE18868-PA 3..411 12..424 1135 50.8 Plus
Dyak\GE23465-PA 418 GE23465-PA 16..417 28..434 834 40.5 Plus
Dyak\GE23962-PA 467 GE23962-PA 50..466 9..434 784 38 Plus
Dyak\GE18344-PA 429 GE18344-PA 25..423 28..434 772 39.6 Plus

FI04406.hyp Sequence

Translation from 2 to 1309

> FI04406.hyp
KPTTTMSLNKCLLFALLAIVASASVSAERVRYDNYRMYKVNSENAKQLEV
LKDLEGSSDSIMFLDGVHLVGADIQIIVAPHKVPDFLEILGKSEIKYELQ
SRDVQKSLDEIDEKVAIKGRATTAYNWAQYYELDDTYAWLQSLAQTNPGV
VTLIEGGKTYQGRSILGVKITKGGETINGKAKPGIFLEAGIHAREWIAPA
AATFIINQLLTSEVENIKELAENYTWYVLPHANPDGYVYTHTTNRLWRKT
RTPYGSCFGADPNRNWGFHWNEVGASSSACSDTYAGPSAFSEIETLSLSK
FIEGLKGKVQLYLSLHAYSQYLLYPYGHTSDLPDNVADFEKVFDASIAAV
NKRYGTTYTGGNIYDAIYPAAGASVDWAYGTQDVRMAFCYELRPSSTSYL
TGFKLPAEQIVPASEELLDSIVAMATEVKSLGYFD*

FI04406.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:40:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17633-PA 430 CG17633-PA 1..430 6..435 2242 100 Plus
CG4017-PA 424 CG4017-PA 3..411 12..424 1106 50.1 Plus
CG2915-PA 453 CG2915-PA 51..452 28..434 814 39.5 Plus
CG2915-PB 453 CG2915-PB 51..452 28..434 814 39.5 Plus
CG7025-PA 429 CG7025-PA 1..422 6..433 766 38.4 Plus