Clone FI04408 Report

Gene	Date	Evidence
Rox8	2008-12-18	5.12 accounting

Clone Sequence Records

FI04408.complete Sequence

2955 bp assembled on 2008-11-04

GenBank Submission: BT050464.1

> FI04408.complete
GAGTGTGTTAGAGAGAGAAAGCGGTGATGCAAGCGTTATCGCCTGCCCTA
GGGTTGCCCCCTTTTCGATAACGTTGCTTCAAATAACTTAAAGTCGCGAA
TTAATGTGTGATCCTTGTCATATTATCGCTGAATTTCCATTAAATACCCC
TACCAGCAACGATTCCAGGGGTCAGCTTCGAAACCCGAAAAGTACACTCA
GCCTGCGAACTTTCACGCTGTTTAACTTAGCTAACTAATTTTTGTACAAG
AGCAAGAATAAGTAGTCGCAACCAAGTATTCATATGTACATTTATACAAT
CCTGTATATTGGAACGGACAACTATTTATAATCACAACAACAACATCCGG
ATCATCGAAGAAGGATCGAGCAATTCTGAAATACCAAGTAGTGTACACCA
AGAAACCCCGAATCCAAATCCCAGGCCCCCAGGAAAGGAAGTCAACCGAT
TATAGACATATATATTAGGCGACTAATCGTATATTCCAAAACACTCCATT
AGCGTTTAGTTAGGACAGATATATTTATACGTATACATATAGATGTTTAA
CGAAATTTTCAATTAGGCGCCAGATTAGGAACAAAATAAAGCAATAAACG
ACGAACCTCAGCGTTAAGCAAATAGATCAACCTACCTAGATTGAGCATAT
AAAGTTTATATAATCCAAAAAAATCAAGCCAAGCCGAGAGTAAGTCGAAA
GTAGTAGAAAATCAAAGTATTCAAATCTCTCTTGGAGTTTCCTGTTAGCA
GCTAGCACCAATTAGATTGCCGCAAATACACCTGTTTAATTAGCAGACAC
TTTAGATTTTGTACGTAGCTAGGAACTTAATCTGCAAATTTTTGATACAT
CCCCTTCCGATTAATGCGGCCAGGTGCAGTAGTTGCAATTCCGGTTTTAG
TGTAGAGTCAGTAGATTGTCGCTGTAGCCTAGTGTATAATCAGATCAAAA
AAGCCACAGTCCCGTGACATCCGACAGCCATGGACGAGTCGCAACCGAAG
ACCCTATACGTGGGCAACCTGGATAGCTCAGTGTCCGAGGACCTGCTAAT
TGCCCTCTTCAGCACCATGGGGCCCGTCAAAAGCTGCAAAATCATTCGGG
AACCGGGCAACGATCCATATGCCTTCATCGAATATTCCAACTACCAGGCA
GCCACAACAGCTCTGACCGCCATGAATAAACGCCTATTCCTCGAAAAGGA
AATCAAGGTCAACTGGGCCACCAGTCCCGGCAATCAGCCGAAGACAGACA
TCAGTTCGCACCACCACATATTCGTGGGCGACCTCAGTCCCGAGATTGAG
ACAGAAACACTGCGCGAGGCTTTCGCCCCATTCGGAGAGATCTCCAACTG
TCGCATTGTGCGCGACCCTCACACCATGAAGTCAAAGGGTTACGCCTTCG
TGTCGTTTGTGAAAAAGGCGGAGGCAGAGAACGCCATCCAGGCGATGAAC
GGCCAGTGGATTGGCTCGCGCTCGATACGCACCAACTGGTCCACGCGCAA
GCTGCCACCACCACGCGAGCCTTCCAAGGGCGGAGGCCAGGGAGGCGGAA
TGGGTGGCGGACCGGGCAATGGGTCCGGTGTAAAGGGAAGTCAACGCCAC
ACCTTCGAGGAAGTGTATAACCAGTCGAGCCCCACCAACACCACCGTATA
CTGTGGCGGATTCCCGCCGAATGTCATCAGTGACGACCTGATGCACAAGC
ACTTCGTCCAGTTTGGTCCCATCCAGGACGTGCGGGTCTTCAAGGACAAG
GGCTTCTCGTTCATCAAGTTTGTTACCAAGGAGGCAGCCGCCCACGCCAT
CGAGCACACGCACAACAGCGAGGTACATGGAAACCTGGTAAAGTGCTTCT
GGGGCAAAGAGAACGGAGGCGATAACTCGGCCAATAACCTCAATGCCGCC
GCTGCCGCGGCAGCAGCCTCTGCCAATGTTGCCGCCGTTGCGGCAGCCAA
TGCTGCGGTTGCCGCTGGAGCGGGTATGCCCGGTCAGATGATGACGCAGC
AACAGATCGCCGCCGCAACAGGAGCGGCGATACCCGGCCAAATGATGACA
CCCCAGCAGATTGCGGCGCAGTATCCATACGCGTACCAGCAGATGGGCTA
CTGGTATCCACCTGCGACTTATCCCACAACCCAGATGCAGACGCAATACA
TGCAGCAGGGCTACTATCCCTACGCCTACCCTACCAGTGCTCAGCAAGCG
GGAGGAGTCCCTTGCATACAATTTTCAGCGGCTGGATACCGCATGGTGCC
GCCGAATGTAGCATGGGGCGTGCCCGGAACTGTGGTGCCCGGTGTGACGG
CTGCCGCAGCATCCGCGGCCGCTGCAGCGAACGGATCACTTGCCCCCCAA
ATGATGTACAGTGCTGCGATGCCACAATACCAGACCCAATGAGCTGAGAT
GTGACGCCAGCTTCGACGCCGTTTGCAGCATCCGGGAAGTCGCCCCCAGC
CGCAGCCACAACCACCTCTGCTGCATCAGCTTCCGCACCTGCAGCAGTTG
CAAGCGCATTACGCACGTTTAGGTTACGTACAATACCGAGTAGTAGCAAA
GTCGGAGCCGCTCCTGGCCATGCCGTTGACCAGCGGCAGCAGCCACATTG
ACGGTGGCAATGTATCTGGAGATTATTAAGGATGCGCGAGTGTCCACTTT
GAAGTTGTGGCTACGGTTGCGGCTGACTGCGGTGGAAGGAAGCGGAATCG
GGTGTGGTATATAGCCCCCCAAAGTCGAACGTTAAGGCGGTGCGTGGAGC
TCAACTTCAAGTGATCCACGCCGGCGACAACTGAAAGAACATCAATTGAA
AAGCTCCGGGCGATGGGCGGGTAGCTGTAACAATCTAATCCAATCTAAGT
ACGTGTTAAATTAATTTAATGATTTCTAATTTAAGCAGATATAGGCGTAT
AAACGAAACGGAAATAAAATAAACCGAATGAGAAATTCAAAAAAAAAAAA
AAAAA

FI04408.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:12:20

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rox8-RD	3292	Rox8-RD	1..2954	1..2954	14725	99.8	Plus
Rox8.d	3274	Rox8.d	1..2211	1..2211	11055	100	Plus
Rox8.k	3388	Rox8.k	268..2325	154..2211	10290	100	Plus
Rox8.d	3274	Rox8.d	2211..2936	2229..2954	3585	99.5	Plus
Rox8.k	3388	Rox8.k	2325..3050	2229..2954	3585	99.5	Plus
Rox8.k	3388	Rox8.k	1..71	85..155	355	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:55:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3R	27901430	chr3R	19868838..19869893	1209..154	5205	99.5	Minus
chr3R	27901430	chr3R	19867760..19868670	2116..1206	4525	99.8	Minus
chr3R	27901430	chr3R	19866808..19867547	2938..2211	3440	98	Minus
chr3R	27901430	chr3R	19871522..19871674	153..1	750	99.3	Minus
chr3R	27901430	chr3R	19867599..19867693	2210..2116	460	98.9	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:24 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:55:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	32079331	3R	24045436..24046491	1209..154	5280	100	Minus
3R	32079331	3R	24044358..24045268	2116..1206	4555	100	Minus
3R	32079331	3R	24043402..24044145	2954..2211	3675	99.6	Minus
3R	32079331	3R	24048113..24048265	153..1	765	100	Minus
3R	32079331	3R	24044197..24044291	2210..2116	475	100	Minus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:30:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	31820162	3R	23786267..23787322	1209..154	5280	100	Minus
3R	31820162	3R	23785189..23786099	2116..1206	4555	100	Minus
3R	31820162	3R	23784233..23784976	2954..2211	3675	99.5	Minus
3R	31820162	3R	23788944..23789096	153..1	765	100	Minus
3R	31820162	3R	23785028..23785122	2210..2116	475	100	Minus

Blast to na_te.dros performed on 2019-03-16 01:55:32 has no hits.

FI04408.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:56:30 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3R	19867599..19867692	2117..2210	98	<-	Minus
chr3R	19867760..19867908	1968..2116	100	==	Minus
chr3R	19866808..19867547	2211..2938	97	<-	Minus
chr3R	19867982..19868668	1208..1894	99	<-	Minus
chr3R	19868840..19869893	154..1207	99	<-	Minus
chr3R	19871522..19871674	1..153	99		Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:47:36 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RD	1..1413	980..2392	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:18:01 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RD	1..1413	980..2392	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:42:16 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RE	1..1413	980..2392	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:51:16 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RE	1..1413	980..2392	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:58:13 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RD	1..2938	1..2938	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:18:01 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RD	1..2938	1..2938	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:42:16 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RD	1..2938	1..2938	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-11-04 12:27:42 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RD	1..2938	1..2938	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:51:16 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rox8-RD	1..2938	1..2938	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:56:30 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	24043418..24044145	2211..2938	100	<-	Minus
3R	24044197..24044290	2117..2210	100	<-	Minus
3R	24044358..24045266	1208..2116	100	<-	Minus
3R	24045438..24046491	154..1207	100	<-	Minus
3R	24048113..24048265	1..153	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:56:30 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	24043418..24044145	2211..2938	100	<-	Minus
3R	24044197..24044290	2117..2210	100	<-	Minus
3R	24044358..24045266	1208..2116	100	<-	Minus
3R	24045438..24046491	154..1207	100	<-	Minus
3R	24048113..24048265	1..153	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:56:30 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	24043418..24044145	2211..2938	100	<-	Minus
3R	24044197..24044290	2117..2210	100	<-	Minus
3R	24044358..24045266	1208..2116	100	<-	Minus
3R	24045438..24046491	154..1207	100	<-	Minus
3R	24048113..24048265	1..153	100		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:42:16 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3R	19873835..19873987	1..153	100		Minus
arm_3R	19869140..19869867	2211..2938	100	<-	Minus
arm_3R	19869919..19870012	2117..2210	100	<-	Minus
arm_3R	19870080..19870988	1208..2116	100	<-	Minus
arm_3R	19871160..19872213	154..1207	100	<-	Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:49:11 Download gff for FI04408.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	23788944..23789096	1..153	100		Minus
3R	23784249..23784976	2211..2938	100	<-	Minus
3R	23785028..23785121	2117..2210	100	<-	Minus
3R	23785189..23786097	1208..2116	100	<-	Minus
3R	23786269..23787322	154..1207	100	<-	Minus

FI04408.pep Sequence

Translation from 979 to 2391

> FI04408.pep
MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFI
EYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVG
DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAE
NAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSG
VKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQD
VRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNS
ANNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAA
IPGQMMTPQQIAAQYPYAYQQMGYWYPPATYPTTQMQTQYMQQGYYPYAY
PTSAQQAGGVPCIQFSAAGYRMVPPNVAWGVPGTVVPGVTAAAASAAAAA
NGSLAPQMMYSAAMPQYQTQ*

FI04408.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:42:03

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF17967-PA	471	GF17967-PA	1..471	1..470	1909	91	Plus
Dana\GF18875-PA	495	GF18875-PA	165..357	96..308	639	55.8	Plus
Dana\GF18877-PA	240	GF18877-PA	1..171	123..313	498	51.5	Plus
Dana\GF20385-PA	341	GF20385-PA	8..180	2..174	259	33.9	Plus
Dana\GF12652-PA	639	GF12652-PA	3..241	8..275	241	26.1	Plus
Dana\GF12652-PA	639	GF12652-PA	92..352	9..287	219	24.2	Plus
Dana\GF18875-PA	495	GF18875-PA	166..340	9..170	215	27.6	Plus
Dana\GF18877-PA	240	GF18877-PA	1..159	35..177	181	28.5	Plus
Dana\GF12652-PA	639	GF12652-PA	185..365	9..174	172	24.7	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:42:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG12380-PA	464	GG12380-PA	1..464	1..470	2438	97.7	Plus
Dere\GG11588-PA	502	GG11588-PA	171..363	96..308	637	55.8	Plus
Dere\GG11590-PA	414	GG11590-PA	108..283	118..310	500	50	Plus
Dere\GG19577-PA	339	GG19577-PA	8..180	2..174	258	33.9	Plus
Dere\GG21846-PA	635	GG21846-PA	3..241	8..275	238	26.8	Plus
Dere\GG11588-PA	502	GG11588-PA	172..346	9..170	213	27.6	Plus
Dere\GG21846-PA	635	GG21846-PA	92..352	9..287	210	24.6	Plus
Dere\GG11590-PA	414	GG11590-PA	114..280	36..186	187	28.3	Plus
Dere\GG21846-PA	635	GG21846-PA	185..365	9..174	171	25.3	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:42:05

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH19101-PA	476	GH19101-PA	1..476	1..470	1732	81.2	Plus
Dgri\GH17439-PA	520	GH17439-PA	179..367	96..304	639	55.9	Plus
Dgri\GH17442-PA	322	GH17442-PA	21..227	123..383	501	43.4	Plus
Dgri\GH17589-PA	340	GH17589-PA	8..180	2..174	265	34.5	Plus
Dgri\GH21052-PA	645	GH21052-PA	3..241	8..275	232	26.1	Plus
Dgri\GH21052-PA	645	GH21052-PA	92..352	9..287	217	23.5	Plus
Dgri\GH17439-PA	520	GH17439-PA	180..354	9..170	204	27.1	Plus
Dgri\GH17442-PA	322	GH17442-PA	1..172	9..170	201	27.7	Plus
Dgri\GH21052-PA	645	GH21052-PA	185..365	9..174	163	24.2	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:25

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rox8-PH	470	CG5422-PH	1..470	1..470	2487	100	Plus
Rox8-PG	470	CG5422-PG	1..470	1..470	2487	100	Plus
Rox8-PE	470	CG5422-PE	1..470	1..470	2487	100	Plus
Rox8-PD	470	CG5422-PD	1..470	1..470	2487	100	Plus
Rox8-PC	464	CG5422-PC	1..464	1..470	2438	98.7	Plus
Rox8-PB	464	CG5422-PB	1..464	1..470	2438	98.7	Plus
CG34354-PD	431	CG34354-PD	88..418	84..466	663	41.9	Plus
CG34354-PE	431	CG34354-PE	88..418	84..466	663	41.9	Plus
CG34354-PG	434	CG34354-PG	88..418	84..466	663	41.9	Plus
trv-PE	509	CG34362-PE	167..497	96..458	663	42.8	Plus
CG34354-PF	550	CG34354-PF	88..418	84..466	663	41.9	Plus
trv-PA	505	CG34362-PA	167..497	96..458	662	42.8	Plus
trv-PJ	508	CG34362-PJ	167..497	96..458	662	42.8	Plus
trv-PI	651	CG34362-PI	313..643	96..458	662	42.8	Plus
trv-PF	498	CG34362-PF	167..494	96..418	661	46.2	Plus
Spx-PA	347	CG3780-PA	8..180	2..174	240	33.3	Plus
Rbp9-PJ	684	CG3151-PJ	104..461	2..316	235	27.4	Plus
pAbp-PA	634	CG5119-PA	3..248	8..282	224	25.8	Plus
pAbp-PB	634	CG5119-PB	3..248	8..282	224	25.8	Plus
pAbp-PC	634	CG5119-PC	3..248	8..282	224	25.8	Plus
hfp-PJ	545	CG12085-PJ	40..384	97..454	220	26.1	Plus
hfp-PI	545	CG12085-PI	40..384	97..454	220	26.1	Plus
hfp-PH	545	CG12085-PH	40..384	97..454	220	26.1	Plus
hfp-PG	545	CG12085-PG	40..384	97..454	220	26.1	Plus
hfp-PF	545	CG12085-PF	40..384	97..454	220	26.1	Plus
hfp-PE	545	CG12085-PE	40..384	97..454	220	26.1	Plus
hfp-PB	545	CG12085-PB	40..384	97..454	220	26.1	Plus
hfp-PD	545	CG12085-PD	40..384	97..454	220	26.1	Plus
hfp-PC	545	CG12085-PC	40..384	97..454	220	26.1	Plus
hfp-PA	637	CG12085-PA	132..476	97..454	220	26.1	Plus
Rbp9-PH	439	CG3151-PH	104..426	2..287	218	26.7	Plus
Rbp9-PG	439	CG3151-PG	104..426	2..287	218	26.7	Plus
Rbp9-PF	439	CG3151-PF	104..426	2..287	218	26.7	Plus
Rbp9-PE	439	CG3151-PE	104..426	2..287	218	26.7	Plus
CG34354-PD	431	CG34354-PD	98..291	9..186	211	27.5	Plus
CG34354-PE	431	CG34354-PE	98..291	9..186	211	27.5	Plus
CG34354-PG	434	CG34354-PG	98..291	9..186	211	27.5	Plus
CG34354-PF	550	CG34354-PF	98..291	9..186	211	27.5	Plus
ssx-PE	443	CG3056-PE	87..289	1..200	211	30.3	Plus
ssx-PB	443	CG3056-PB	87..289	1..200	211	30.3	Plus
ssx-PD	485	CG3056-PD	87..289	1..200	211	30.3	Plus
Rbp9-PK	444	CG3151-PK	104..431	2..287	205	26.3	Plus
Rbp9-PI	444	CG3151-PI	104..431	2..287	205	26.3	Plus
Rbp9-PB	444	CG3151-PB	104..431	2..287	205	26.3	Plus
Rbp9-PC	444	CG3151-PC	104..431	2..287	205	26.3	Plus
trv-PE	509	CG34362-PE	168..349	9..177	204	27.1	Plus
trv-PA	505	CG34362-PA	168..349	9..177	204	27.1	Plus
trv-PJ	508	CG34362-PJ	168..349	9..177	204	27.1	Plus
trv-PF	498	CG34362-PF	168..349	9..177	204	27.1	Plus
trv-PI	651	CG34362-PI	314..495	9..177	204	27.1	Plus
hfp-PJ	545	CG12085-PJ	40..215	9..178	202	28	Plus
hfp-PI	545	CG12085-PI	40..215	9..178	202	28	Plus
hfp-PH	545	CG12085-PH	40..215	9..178	202	28	Plus
hfp-PG	545	CG12085-PG	40..215	9..178	202	28	Plus
hfp-PF	545	CG12085-PF	40..215	9..178	202	28	Plus
hfp-PE	545	CG12085-PE	40..215	9..178	202	28	Plus
hfp-PB	545	CG12085-PB	40..215	9..178	202	28	Plus
hfp-PD	545	CG12085-PD	40..215	9..178	202	28	Plus
hfp-PC	545	CG12085-PC	40..215	9..178	202	28	Plus
hfp-PA	637	CG12085-PA	132..307	9..178	202	28	Plus
elav-PC	479	CG4262-PC	147..468	9..287	200	26.8	Plus
elav-PB	479	CG4262-PB	147..468	9..287	200	26.8	Plus
elav-PA	483	CG4262-PA	151..472	9..287	200	26.8	Plus
elav-PD	483	CG4262-PD	151..472	9..287	200	26.8	Plus
pAbp-PA	634	CG5119-PA	92..506	9..468	195	23.5	Plus
pAbp-PB	634	CG5119-PB	92..506	9..468	195	23.5	Plus
pAbp-PC	634	CG5119-PC	92..506	9..468	195	23.5	Plus
fne-PJ	353	CG4396-PJ	22..340	2..287	187	24.5	Plus
fne-PI	353	CG4396-PI	22..340	2..287	187	24.5	Plus
fne-PD	353	CG4396-PD	22..340	2..287	187	24.5	Plus
fne-PE	356	CG4396-PE	22..343	2..287	187	24.8	Plus
fne-PH	356	CG4396-PH	22..343	2..287	187	24.8	Plus
fne-PG	356	CG4396-PG	22..343	2..287	187	24.8	Plus
elav-PC	479	CG4262-PC	400..477	97..174	169	42.3	Plus
elav-PB	479	CG4262-PB	400..477	97..174	169	42.3	Plus
elav-PA	483	CG4262-PA	404..481	97..174	169	42.3	Plus
elav-PD	483	CG4262-PD	404..481	97..174	169	42.3	Plus
fne-PJ	353	CG4396-PJ	272..349	97..174	162	39.7	Plus
fne-PI	353	CG4396-PI	272..349	97..174	162	39.7	Plus
fne-PD	353	CG4396-PD	272..349	97..174	162	39.7	Plus
fne-PE	356	CG4396-PE	275..352	97..174	162	39.7	Plus
fne-PH	356	CG4396-PH	275..352	97..174	162	39.7	Plus
fne-PG	356	CG4396-PG	275..352	97..174	162	39.7	Plus
Rbp9-PH	439	CG3151-PH	347..435	86..174	160	37.1	Plus
Rbp9-PG	439	CG3151-PG	347..435	86..174	160	37.1	Plus
Rbp9-PF	439	CG3151-PF	347..435	86..174	160	37.1	Plus
Rbp9-PE	439	CG3151-PE	347..435	86..174	160	37.1	Plus
Rbp9-PK	444	CG3151-PK	352..440	86..174	160	37.1	Plus
Rbp9-PI	444	CG3151-PI	352..440	86..174	160	37.1	Plus
Rbp9-PB	444	CG3151-PB	352..440	86..174	160	37.1	Plus
Rbp9-PC	444	CG3151-PC	352..440	86..174	160	37.1	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:42:06

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI22960-PA	475	GI22960-PA	1..475	1..470	1799	84.3	Plus
Dmoj\GI22766-PA	387	GI22766-PA	46..234	96..304	634	55.9	Plus
Dmoj\GI22767-PA	315	GI22767-PA	76..281	123..383	497	44.7	Plus
Dmoj\GI16317-PA	340	GI16317-PA	8..180	2..174	264	34.5	Plus
Dmoj\GI18654-PA	645	GI18654-PA	3..241	8..275	233	25.7	Plus
Dmoj\GI22766-PA	387	GI22766-PA	47..221	9..170	215	27.6	Plus
Dmoj\GI18654-PA	645	GI18654-PA	92..352	9..287	213	23.2	Plus
Dmoj\GI22767-PA	315	GI22767-PA	76..227	35..170	181	29.1	Plus
Dmoj\GI18654-PA	645	GI18654-PA	185..365	9..174	176	25.8	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:42:07

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL24152-PA	464	GL24152-PA	1..464	1..470	1896	87.6	Plus
Dper\GL23648-PA	503	GL23648-PA	171..361	94..304	643	55.9	Plus
Dper\GL23650-PA	320	GL23650-PA	76..246	123..313	499	52.1	Plus
Dper\GL21313-PA	341	GL21313-PA	8..180	2..174	258	33.9	Plus
Dper\GL11548-PA	640	GL11548-PA	92..352	9..287	230	24.6	Plus
Dper\GL11548-PA	640	GL11548-PA	3..241	8..275	229	26.1	Plus
Dper\GL23648-PA	503	GL23648-PA	174..348	9..170	212	27.1	Plus
Dper\GL23650-PA	320	GL23650-PA	75..227	34..170	176	28.3	Plus
Dper\GL11548-PA	640	GL11548-PA	185..365	9..174	172	25.8	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:42:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA18869-PA	464	GA18869-PA	1..464	1..470	1896	87.6	Plus
Dpse\GA26680-PA	503	GA26680-PA	171..361	94..304	643	55.9	Plus
Dpse\GA30124-PA	464	GA30124-PA	113..336	105..383	581	47.5	Plus
Dpse\GA17684-PA	341	GA17684-PA	8..180	2..174	259	33.9	Plus
Dpse\GA18673-PA	640	GA18673-PA	3..241	8..275	227	26.1	Plus
Dpse\GA18673-PA	640	GA18673-PA	92..352	9..287	225	24.2	Plus
Dpse\GA26680-PA	503	GA26680-PA	174..348	9..170	212	27.1	Plus
Dpse\GA30124-PA	464	GA30124-PA	106..282	13..170	195	27.9	Plus
Dpse\GA18673-PA	640	GA18673-PA	185..365	9..174	172	25.8	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:42:10

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM23518-PA	464	GM23518-PA	1..464	1..470	2445	97.9	Plus
Dsec\GM16370-PA	504	GM16370-PA	166..358	96..308	636	55.8	Plus
Dsec\GM16372-PA	246	GM16372-PA	1..178	115..313	498	51	Plus
Dsec\GM12470-PA	299	GM12470-PA	8..180	2..174	254	33.3	Plus
Dsec\GM21847-PA	634	GM21847-PA	3..241	8..275	232	26.4	Plus
Dsec\GM16370-PA	504	GM16370-PA	167..341	9..170	211	27.6	Plus
Dsec\GM21847-PA	634	GM21847-PA	92..352	9..287	210	24.6	Plus
Dsec\GM16372-PA	246	GM16372-PA	6..175	33..186	186	27.8	Plus
Dsec\GM21847-PA	634	GM21847-PA	185..365	9..174	170	25.3	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:42:11

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD18328-PA	824	GD18328-PA	1..357	1..379	1863	92.6	Plus
Dsim\GD21364-PA	496	GD21364-PA	165..357	96..308	637	55.8	Plus
Dsim\GD21365-PA	363	GD21365-PA	98..295	96..313	615	54.8	Plus
Dsim\GD11341-PA	379	GD11341-PA	3..241	8..275	224	26.4	Plus
Dsim\GD21365-PA	363	GD21365-PA	99..292	9..186	221	27.5	Plus
Dsim\GD21364-PA	496	GD21364-PA	166..340	9..170	213	27.6	Plus
Dsim\GD11341-PA	379	GD11341-PA	92..352	9..287	206	24.6	Plus
Dsim\GD16475-PA	466	GD16475-PA	147..295	9..158	205	32.5	Plus
Dsim\GD16475-PA	466	GD16475-PA	387..464	97..174	175	42.3	Plus
Dsim\GD11341-PA	379	GD11341-PA	185..365	9..174	165	25.3	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:42:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ14540-PA	472	GJ14540-PA	1..472	1..470	1839	84.6	Plus
Dvir\GJ22768-PA	504	GJ22768-PA	170..371	94..315	652	54.5	Plus
Dvir\GJ22770-PA	401	GJ22770-PA	66..300	94..383	621	48.1	Plus
Dvir\GJ15655-PA	340	GJ15655-PA	8..180	2..174	264	34.5	Plus
Dvir\GJ21671-PA	645	GJ21671-PA	3..241	8..275	233	26.1	Plus
Dvir\GJ21671-PA	645	GJ21671-PA	92..352	9..287	228	24.6	Plus
Dvir\GJ22770-PA	401	GJ22770-PA	69..246	9..170	218	28.3	Plus
Dvir\GJ22768-PA	504	GJ22768-PA	173..347	9..170	216	27.6	Plus
Dvir\GJ21671-PA	645	GJ21671-PA	185..365	9..174	173	25.3	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:42:13

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK11939-PA	469	GK11939-PA	1..469	1..470	1882	88.2	Plus
Dwil\GK22641-PA	521	GK22641-PA	182..370	96..304	638	56.4	Plus
Dwil\GK22643-PA	365	GK22643-PA	1..171	123..313	503	52.1	Plus
Dwil\GK19717-PA	339	GK19717-PA	8..180	2..174	262	33.9	Plus
Dwil\GK19652-PA	638	GK19652-PA	3..241	8..275	234	26.1	Plus
Dwil\GK19652-PA	638	GK19652-PA	92..352	9..287	227	24.6	Plus
Dwil\GK22641-PA	521	GK22641-PA	183..357	9..170	205	26	Plus
Dwil\GK22643-PA	365	GK22643-PA	1..152	35..170	178	28.5	Plus
Dwil\GK19652-PA	638	GK19652-PA	185..365	9..174	168	24.7	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:42:14

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE10834-PA	464	GE10834-PA	1..464	1..470	2440	97.7	Plus
Dyak\GE23777-PA	543	GE23777-PA	208..404	92..308	642	55.3	Plus
Dyak\GE23778-PA	269	GE23778-PA	1..138	156..313	357	46.6	Plus
Dyak\GE16738-PA	339	GE16738-PA	8..180	2..174	257	33.9	Plus
Dyak\GE11925-PA	634	GE11925-PA	3..241	8..275	233	26.4	Plus
Dyak\GE23777-PA	543	GE23777-PA	213..387	9..170	214	27.6	Plus
Dyak\GE11925-PA	634	GE11925-PA	92..352	9..287	209	24.6	Plus
Dyak\GE11925-PA	634	GE11925-PA	185..365	9..174	170	25.3	Plus

FI04408.hyp Sequence

Translation from 979 to 2391

> FI04408.hyp
MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFI
EYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVG
DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAE
NAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSG
VKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQD
VRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNS
ANNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAA
IPGQMMTPQQIAAQYPYAYQQMGYWYPPATYPTTQMQTQYMQQGYYPYAY
PTSAQQAGGVPCIQFSAAGYRMVPPNVAWGVPGTVVPGVTAAAASAAAAA
NGSLAPQMMYSAAMPQYQTQ*

FI04408.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:41:07

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rox8-PH	470	CG5422-PH	1..470	1..470	2487	100	Plus
Rox8-PG	470	CG5422-PG	1..470	1..470	2487	100	Plus
Rox8-PE	470	CG5422-PE	1..470	1..470	2487	100	Plus
Rox8-PD	470	CG5422-PD	1..470	1..470	2487	100	Plus
Rox8-PC	464	CG5422-PC	1..464	1..470	2438	98.7	Plus

Library:	FI
Tissue Source:	various Drosophila melanogaster
Created by:
Date Registered:	2005-11-08
Comments:	Drosophila melanogaster corrected cDNA clones
Original Plate Number:	44
Well:	8
Vector:	pFlc-1
Associated Gene/Transcript	Rox8-RD
Protein status:	FI04408.pep: gold
Sequenced Size:	2955

Clone FI04408 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

FI04408.complete Sequence

FI04408.complete Blast Records

FI04408.complete Sim4 Records

FI04408.pep Sequence

FI04408.pep Blast Records

FI04408.hyp Sequence

FI04408.hyp Blast Records