BDGP Sequence Production Resources |
Search the DGRC for FI04419
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 44 |
Well: | 19 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Lamp1-RA |
Protein status: | FI04419.pep: gold |
Sequenced Size: | 1599 |
Gene | Date | Evidence |
---|---|---|
CG3305 | 2008-12-18 | 5.12 accounting |
1599 bp assembled on 2008-11-06
GenBank Submission: BT050563.1
> FI04419.complete TGAAAAATAAAAACTAGCTCAGTCGAGACAAAAACGTATGTGTCAGTGTA GTAGATTAACGTATAGAAAAACTGCAACACAACTTAAGTGAGATTGCCAT TCAATATGTTCGCCAACAAATTGTTGACCTGCTCGGCATTACTAATAATG TTATTTTTACTAAGCAGTACAGTGTTCTCTCAAAAGCTTATTGGCTTGCC GAGAGTCGGTAAAAATGTTAGTGATTTGTTTCTGGAACAAGCAAACCCAC TGACCAGCAGCTCCTCAACAATCTCAACGTCTTCGACAACAACTGAGAAA CCTATCACAACCAGATCAACTTCTACAATAACTCCGAGATCTACCACACC TTCAACGGAATCACCATCGACCACCGCACCAGTGATAAGCACGACCATTG CCCCGCAACCATATCCGCAACCATCCATTGGGGCTTGGAATACCTCTTGT ATTATGCTTCAAATGGCGGCACAACTTAATTTTACCTATGAGGCTAGGGA GGGAAACTTTACCACCGGTCTGTACAACATCCCCAGCAACGCATCTGTTG AAGATGCAGAATGTAAAAGCCAGACTACTCAGTTTATTCATCTGATTTGG GGACCAGAAACATCAAAGCAATCATTAATTATGTATTTTAATAAAAGTAA TGACACCACTGTGCTTTCCTTTATGCAAATTCATCTGGCTTTGCTGCCTG AGGATTTTCCAGATGCAAAGGAAAATCAAACGGTTCAGCTTATTACCAGG AGCGACGGAGCGTTTAAGACACCAGAAAATATGTCGTATCACTGCACTCG TGTTCAGAAGATAAATATGACTGAGACACTCGATGCTGAGCAGTTAATTG GTTGGATCAGCGTCAGTCATGTTCAGGTGGAGGCTTTCCGGAGGGCCAAC GACACTGGTTTCTCAGTTGGACACGATTGCGATAGCTCGGAAACTTCGGA TGTGGTTCCCATTGCCGTTGGAATTGCTTTAGCTGCATTAATTTTGGTGG TATTAATATCATATCTGTGTGCTAGGCGTCGTTCCACCTCCCGCGGTTAC ATGAGCTTCTAATAGAAGGACATCAGCTTAATTGGGCAGGTTGCGAATCA AAGGAGTATGGACAGCAAATTGTTAGAGAGAAATTTAAGATTGATTTTTA TTATTGGAAGCCAAAATTGATTAGTTGAAGTTGAATTAGTTTTTTTTTTC AAGAGGGTCATCGAAATCATCAAGCGCAATTGGGTTTAGAATAATAAAAC GGTTCTTTAAAAACTTTTTTACGTCTCTGTCTTTGTAAGTGTCCGATATT GGTTCTTGTATGCTGATATTTGTGTTTTATTTAATTGGTTTGAGCAATGT AAATGTAAAATAAAAAAAAAATTTCTAAATAAATTAATCTCTATAATGTA GCTACCGTGTTAACCCTAAAAAGGTGGTGTCAGAGAGGACATTTCTATTG TTAAGGCAAAAACCTGTACGCAATACCAACAAGTATACATTCTATTCAAA TGTTATATTTTTTAAACATTATTATTGGGGCATATAAATGTGTGTATTCC TGACCTTAACTGTAATAAATAATATTTAAAACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3305-RA | 1669 | CG3305-RA | 49..1629 | 4..1585 | 7870 | 99.9 | Plus |
CG3305.b | 1625 | CG3305.b | 38..1616 | 4..1585 | 7815 | 99.8 | Plus |
CG3305.c | 1490 | CG3305.c | 70..1481 | 173..1585 | 7025 | 99.9 | Plus |
CG3305.c | 1490 | CG3305.c | 38..69 | 4..35 | 160 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 21574737..21575598 | 721..1583 | 4265 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 21573280..21573608 | 171..499 | 1645 | 100 | Plus |
chr2L | 23010047 | chr2L | 21574459..21574681 | 499..721 | 1115 | 100 | Plus |
chr2L | 23010047 | chr2L | 21571888..21572056 | 4..172 | 845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21576242..21577105 | 721..1585 | 4275 | 99.9 | Plus |
2L | 23513712 | 2L | 21574785..21575113 | 171..499 | 1645 | 100 | Plus |
2L | 23513712 | 2L | 21575964..21576186 | 499..721 | 1115 | 100 | Plus |
2L | 23513712 | 2L | 21573393..21573561 | 4..172 | 845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21576242..21577105 | 721..1585 | 4285 | 99.8 | Plus |
2L | 23513712 | 2L | 21574785..21575113 | 171..499 | 1645 | 100 | Plus |
2L | 23513712 | 2L | 21575964..21576186 | 499..721 | 1115 | 100 | Plus |
2L | 23513712 | 2L | 21573393..21573561 | 4..172 | 845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 815..991 | 1346..1524 | 132 | 57.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 21573282..21573608 | 173..499 | 100 | -> | Plus |
chr2L | 21571886..21572056 | 1..172 | 98 | -> | Plus |
chr2L | 21574460..21574681 | 500..721 | 100 | -> | Plus |
chr2L | 21574738..21575598 | 722..1583 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3305-RA | 1..957 | 106..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3305-RA | 1..957 | 106..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lamp1-RA | 1..957 | 106..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lamp1-RA | 1..957 | 106..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3305-RA | 14..1594 | 1..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3305-RA | 14..1594 | 1..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lamp1-RA | 3..1583 | 1..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3305-RA | 14..1594 | 1..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lamp1-RA | 3..1583 | 1..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21573391..21573561 | 1..172 | 98 | -> | Plus |
2L | 21574787..21575113 | 173..499 | 100 | -> | Plus |
2L | 21575965..21576186 | 500..721 | 100 | -> | Plus |
2L | 21576243..21577103 | 722..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21573391..21573561 | 1..172 | 98 | -> | Plus |
2L | 21574787..21575113 | 173..499 | 100 | -> | Plus |
2L | 21575965..21576186 | 500..721 | 100 | -> | Plus |
2L | 21576243..21577103 | 722..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21573391..21573561 | 1..172 | 98 | -> | Plus |
2L | 21574787..21575113 | 173..499 | 100 | -> | Plus |
2L | 21575965..21576186 | 500..721 | 100 | -> | Plus |
2L | 21576243..21577103 | 722..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 21575965..21576186 | 500..721 | 100 | -> | Plus |
arm_2L | 21573391..21573561 | 1..172 | 98 | -> | Plus |
arm_2L | 21574787..21575113 | 173..499 | 100 | -> | Plus |
arm_2L | 21576243..21577103 | 722..1583 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21574787..21575113 | 173..499 | 100 | -> | Plus |
2L | 21575965..21576186 | 500..721 | 100 | -> | Plus |
2L | 21576243..21577103 | 722..1583 | 99 | Plus | |
2L | 21573391..21573561 | 1..172 | 98 | -> | Plus |
Translation from 105 to 1061
> FI04419.pep MFANKLLTCSALLIMLFLLSSTVFSQKLIGLPRVGKNVSDLFLEQANPLT SSSSTISTSSTTTEKPITTRSTSTITPRSTTPSTESPSTTAPVISTTIAP QPYPQPSIGAWNTSCIMLQMAAQLNFTYEAREGNFTTGLYNIPSNASVED AECKSQTTQFIHLIWGPETSKQSLIMYFNKSNDTTVLSFMQIHLALLPED FPDAKENQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQLIGW ISVSHVQVEAFRRANDTGFSVGHDCDSSETSDVVPIAVGIALAALILVVL ISYLCARRRSTSRGYMSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15483-PA | 317 | GF15483-PA | 1..317 | 1..318 | 817 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21336-PA | 317 | GG21336-PA | 1..317 | 1..318 | 1238 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13233-PA | 325 | GH13233-PA | 106..325 | 100..318 | 758 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lamp1-PA | 318 | CG3305-PA | 1..318 | 1..318 | 1616 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12441-PA | 300 | GI12441-PA | 66..300 | 82..318 | 831 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26666-PA | 332 | GL26666-PA | 113..332 | 99..318 | 843 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17249-PA | 332 | GA17249-PA | 113..332 | 99..318 | 846 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16136-PA | 390 | GM16136-PA | 201..390 | 129..318 | 940 | 90 | Plus |
Dsec\GM16136-PA | 390 | GM16136-PA | 1..219 | 1..227 | 715 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24324-PA | 316 | GD24324-PA | 1..316 | 1..318 | 1307 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17883-PA | 324 | GJ17883-PA | 88..324 | 85..318 | 838 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18743-PA | 325 | GK18743-PA | 1..325 | 1..318 | 753 | 54.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12921-PA | 315 | GE12921-PA | 1..315 | 1..318 | 1199 | 78.7 | Plus |
Translation from 105 to 1061
> FI04419.hyp MFANKLLTCSALLIMLFLLSSTVFSQKLIGLPRVGKNVSDLFLEQANPLT SSSSTISTSSTTTEKPITTRSTSTITPRSTTPSTESPSTTAPVISTTIAP QPYPQPSIGAWNTSCIMLQMAAQLNFTYEAREGNFTTGLYNIPSNASVED AECKSQTTQFIHLIWGPETSKQSLIMYFNKSNDTTVLSFMQIHLALLPED FPDAKENQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQLIGW ISVSHVQVEAFRRANDTGFSVGHDCDSSETSDVVPIAVGIALAALILVVL ISYLCARRRSTSRGYMSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lamp1-PA | 318 | CG3305-PA | 1..318 | 1..318 | 1616 | 100 | Plus |