Clone FI04421 Report

Search the DGRC for FI04421

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:21
Vector:pFlc-1
Associated Gene/TranscriptCG3246-RA
Protein status:FI04421.pep: gold
Sequenced Size:1519

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3246 2008-12-18 5.12 accounting

Clone Sequence Records

FI04421.complete Sequence

1519 bp assembled on 2008-09-15

GenBank Submission: BT044497.1

> FI04421.complete
TCAGTGCGTGTTTGTTCCGAGTAGAGAACGGAGGCTGGCGCGTTTTCTTC
CATTTTCCAACTGATAAGCAGAAGCTCCAGCTAATCCCCGAAAGATGAAG
CCGTTGATAGTGGTCGTGCTCGTGGGCCTGATGGCAAGTGGCTGCCACAT
TGTTCACTCCCAGGAGCCTGGCGATGCTGTGGAGCAGGAAGCCAGCGAGT
CGGATGACGCACTTAAGATCAAAGAGAGTCAGGCCAGCATAGCCGCCCAG
GTGGAGGCCATGCTCGTGCACTTTCAGCAGGAGGATCCGCAGGGTCTGCC
CGGCGTGCCCGTGCCCGATCCGTTGGAGGTGCCCAATGTGAAGAAGAGCA
TGGGCATGGCCAATCTGGACATGAAGCAGGTCAAGGCGTATGGCTTGTCC
AAGTTCCGCATTGATAAAATGAACCTAGACCTGAAGGAAATGAGATTCAA
CGGTGGCCTCCAGCTGGACCAGATGCTGGTCAAGGGCCAGTACACCCTCA
GTTCATTCTTTTCGAAAGCCAATGGACCCTTTACAGTAGTCCTGAAGAAT
GTCTATGCCGAGGCAACCGCCTTCTTGGCCGTCGAACGAGACGGTCAGCT
GGCCACGGACCGCATCAAGATCGACATCACATTCTCGGACATGACAATGG
ACTTCCAGAACCTCGGCCTGGTGGGCAGTGTCTTTCAGAGCGTGGTGAAC
GGTGCGCCCAACTTGGTCTTCGACGCCATGAAGCCATTTATGCTCCAAGA
GGCGGACAAAAAGCTGCGCAGCGAGATCAACGTAATGATCCAGAAAACCT
TGGGCGAACGCCGACTGCCCAATTCCATAACGCCGCTGGACAGCGCCATT
GCCATGGCACGCAAGATGGTTCGGCAGAAGGGCTTCGATCCGTACCACCT
GCCTGATGTCAATCGCACCATGGGCGTGTTCAGTGTCCAGTTAGCACACA
CCTGGATCAATGGAATCTCTAGCTTCTACCGCGTGGGCAACATAACCGCT
GGCATGGCCAACAAAACGGTGTCGGTCGTTCTGCAAATAGGCACCCAGCA
GGTGACGGGAGCCGGCCAGTGGGAGGTGGGTGTGGGCATGATGACACGCG
TCGGTCACGTACAATTTACGGTTCAGCACATACGCGCCACCGTTGGCCTG
AGCCAATCCCTGGACACACGCAAGCGGGCGCAGATCACCGATCTGCAGTT
TGACATGGGCAACATACAGGTGCGATGTGACGGAGCGGGAACGCTGGACT
ACGTCATGGAGTTTGCGGTGAACGTCATTCCCAACCTGCTGCGCTACCAG
ATCATGGACGCCATCGAGAACCCCATCAAGCAGCGTGTGCAGGAGAAGTT
CAACACCATCGATGTGGAGCAGGTCATCAAGACCATGGCTCAGAACAACT
TCAACTTTGACCCAAAGCTGTTGGGCTTGTGAGTCGTGGTAGTAAGTAAG
AGAGTTATGCAATCGAATAAAGATTTATCCCTAGAACATGGGTAATCACA
AGCTAAAAAAAAAAAAAAA

FI04421.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG3246-RA 1589 CG3246-RA 80..1583 2..1505 7505 99.9 Plus
sec5-RA 2896 sec5-RA 2840..2896 1505..1449 285 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3459894..3460952 1504..446 5235 99.6 Minus
chr2L 23010047 chr2L 3461010..3461279 445..176 1290 98.5 Minus
chr2L 23010047 chr2L 3461342..3461516 176..2 845 98.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3460321..3461380 1505..446 5285 99.9 Minus
2L 23513712 2L 3461438..3461707 445..176 1350 100 Minus
2L 23513712 2L 3461770..3461944 176..2 875 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3460321..3461380 1505..446 5285 99.9 Minus
2L 23513712 2L 3461438..3461707 445..176 1350 100 Minus
2L 23513712 2L 3461770..3461944 176..2 875 100 Minus
Blast to na_te.dros performed on 2019-03-16 00:59:31 has no hits.

FI04421.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:00:23 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3461010..3461278 177..445 98 <- Minus
chr2L 3461342..3461516 1..176 98   Minus
chr2L 3459894..3460952 446..1504 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:47:43 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 1..1338 95..1432 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:01:40 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 1..1338 95..1432 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:00:01 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 1..1338 95..1432 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:18:59 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 1..1338 95..1432 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:20:08 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 31..1534 1..1504 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:01:40 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 31..1534 1..1504 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:00:01 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 8..1511 1..1504 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:14:02 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 31..1534 1..1504 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:18:59 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
CG3246-RA 8..1511 1..1504 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:23 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3460322..3461380 446..1504 99 <- Minus
2L 3461438..3461706 177..445 100 <- Minus
2L 3461770..3461944 1..176 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:23 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3460322..3461380 446..1504 99 <- Minus
2L 3461438..3461706 177..445 100 <- Minus
2L 3461770..3461944 1..176 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:23 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3460322..3461380 446..1504 99 <- Minus
2L 3461438..3461706 177..445 100 <- Minus
2L 3461770..3461944 1..176 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:00:01 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3460322..3461380 446..1504 99 <- Minus
arm_2L 3461438..3461706 177..445 100 <- Minus
arm_2L 3461770..3461944 1..176 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:29:10 Download gff for FI04421.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3461770..3461944 1..176 99   Minus
2L 3460322..3461380 446..1504 99 <- Minus
2L 3461438..3461706 177..445 100 <- Minus

FI04421.pep Sequence

Translation from 94 to 1431

> FI04421.pep
MKPLIVVVLVGLMASGCHIVHSQEPGDAVEQEASESDDALKIKESQASIA
AQVEAMLVHFQQEDPQGLPGVPVPDPLEVPNVKKSMGMANLDMKQVKAYG
LSKFRIDKMNLDLKEMRFNGGLQLDQMLVKGQYTLSSFFSKANGPFTVVL
KNVYAEATAFLAVERDGQLATDRIKIDITFSDMTMDFQNLGLVGSVFQSV
VNGAPNLVFDAMKPFMLQEADKKLRSEINVMIQKTLGERRLPNSITPLDS
AIAMARKMVRQKGFDPYHLPDVNRTMGVFSVQLAHTWINGISSFYRVGNI
TAGMANKTVSVVLQIGTQQVTGAGQWEVGVGMMTRVGHVQFTVQHIRATV
GLSQSLDTRKRAQITDLQFDMGNIQVRCDGAGTLDYVMEFAVNVIPNLLR
YQIMDAIENPIKQRVQEKFNTIDVEQVIKTMAQNNFNFDPKLLGL*

FI04421.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23414-PA 449 GF23414-PA 2..449 1..445 1825 74.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:39:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24439-PA 445 GG24439-PA 1..445 1..445 2307 96.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10189-PA 445 GH10189-PA 1..437 1..439 1658 68.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG3246-PA 445 CG3246-PA 1..445 1..445 2255 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14253-PA 448 GI14253-PA 1..442 1..442 1608 66.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18895-PA 447 GL18895-PA 1..447 1..442 1811 75.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16920-PA 447 GA16920-PA 1..447 1..442 1811 75.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11133-PA 445 GM11133-PA 1..445 1..445 2318 97.5 Plus
Dsec\GM22562-PA 58 GM22562-PA 1..58 388..445 293 96.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22756-PA 445 GD22756-PA 1..445 1..445 2336 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20625-PA 447 GJ20625-PA 25..430 30..435 1650 73.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23861-PA 452 GK23861-PA 1..452 1..442 1720 71 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14872-PA 445 GE14872-PA 1..445 1..445 2298 96.2 Plus

FI04421.hyp Sequence

Translation from 94 to 1431

> FI04421.hyp
MKPLIVVVLVGLMASGCHIVHSQEPGDAVEQEASESDDALKIKESQASIA
AQVEAMLVHFQQEDPQGLPGVPVPDPLEVPNVKKSMGMANLDMKQVKAYG
LSKFRIDKMNLDLKEMRFNGGLQLDQMLVKGQYTLSSFFSKANGPFTVVL
KNVYAEATAFLAVERDGQLATDRIKIDITFSDMTMDFQNLGLVGSVFQSV
VNGAPNLVFDAMKPFMLQEADKKLRSEINVMIQKTLGERRLPNSITPLDS
AIAMARKMVRQKGFDPYHLPDVNRTMGVFSVQLAHTWINGISSFYRVGNI
TAGMANKTVSVVLQIGTQQVTGAGQWEVGVGMMTRVGHVQFTVQHIRATV
GLSQSLDTRKRAQITDLQFDMGNIQVRCDGAGTLDYVMEFAVNVIPNLLR
YQIMDAIENPIKQRVQEKFNTIDVEQVIKTMAQNNFNFDPKLLGL*

FI04421.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG3246-PA 445 CG3246-PA 1..445 1..445 2255 100 Plus