Clone FI04422 Report

Search the DGRC for FI04422

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:22
Vector:pFlc-1
Associated Gene/TranscriptCG9947-RA
Protein status:FI04422.pep: gold
Sequenced Size:1262

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9947 2008-12-18 5.12 accounting

Clone Sequence Records

FI04422.complete Sequence

1262 bp assembled on 2008-09-12

GenBank Submission: BT044187.1

> FI04422.complete
GATTCAATTGGAGTCACTTGCAGCGTTTGGACACCAAGGAGCTTTTCGAG
GAGCATAGCGAGAAACCAGATAAGCCACCATGTCCACACAGCAAGCGGAG
AATGAGGAGAGTGCAGCGGCGAAGTCCAAGCGACCTTCAGATTCGGCCTT
CAAGCAACAGCGCCTGCCCGCCTGGCAGCCCGTCCTGACCGCCCGCACCG
TACTGCCCACCTTCTTCGTTATCGGAGTTCTATTCATACCCATCGGCGTG
GTCCTGCTCCACCTGAGCAACACCGCCAACGAGCTGATCATCGACTACAC
CAAGTGCAGGCGCTCGGGCGGAAATACCACCTGTGCGGAGTATCTGGAGG
CCAACCCCGGCGTTACGTGCCCCTGCGAGGTGCCCTTCGTCCTGCCCTCG
GACTTCAATGGTGTGGTATACATGTACTACGGACTGACCAACTACTATCA
GAACCATCGGCGCTATGTGAAGTCACGGGACGACGAGCAGCTGCTGGGTC
ACCTGTCGCAAACGCCCAGTACAGACTGTGCCCCCTTCGCCTATGATCCC
GATTCCGGAAAGCCCATCGCGCCCTGCGGTGCCATTGCCAACTCGCTGTT
CAATGACACGCTGACCCTCTTGCAGGGTGGATCCGAGATCAAGCTGCTGA
AGACGGGCATTGCCTGGCCGTCGGACAAGCGCGTCAAGTTCCGAAACCCA
GAGGGTAACCTGAACGTCTCCCTTGAGGGCTTCTCAAAGCCAATTTTCTG
GCAGAAGGGTCTGGCCGACCTGGACCCGGAGAATCCGGACAACAATGGCT
TCCAGAACGAGGATCTGATCGTGTGGATGCGCACCGCCGCTCTGCCCAGC
TTCCGGAAGCTATATCGCCGTCTCAACCAAACGAACACCAACTATGCCAA
CGGCCTGAAGTCTGGCAATTATACGCTTAACATTAAGTATAATTATCCGG
TGGTGTCGTTCGACGGCACGAAGCGAATGATACTCTCCACCACATCCGTG
CTCGGTGGCAAGAACCCGTTCCTGGGCATTGCGTACATTGTGGTGGGTGC
CATTTGCATCACCCTGGGCCTGGCCCTGCTATTTATTCATATGCGATGCA
GTCGCAGCAACATGGAGATGATCAACGTGAACCCGCACACGCAGTACTCC
TAGACCGAGCACCGTCAGTATTCCGGGCCGCTTCACTTAGCTTTAGTAGA
TCCATTTCTTTAAGCCTTATCAGCATAAAATAGTTTCTATTAACCCAAAA
AAAAAAAAAAAA

FI04422.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9947.b 1888 CG9947.b 56..1301 2..1247 6230 100 Plus
CG9947-RA 1301 CG9947-RA 56..1301 2..1247 6230 100 Plus
CG9947.a 1366 CG9947.a 45..1152 2..1109 5540 100 Plus
CG9947.a 1366 CG9947.a 1241..1297 1107..1163 285 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:14:10
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16329540..16329876 941..605 1655 99.4 Minus
chrX 22417052 chrX 16330369..16330641 410..138 1365 100 Minus
chrX 22417052 chrX 16329933..16330125 602..410 965 100 Minus
chrX 22417052 chrX 16329310..16329475 1107..942 830 100 Minus
chrX 22417052 chrX 16328861..16329002 1246..1105 710 100 Minus
chrX 22417052 chrX 16330855..16330993 140..2 695 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:14:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16439827..16440163 941..605 1685 100 Minus
X 23542271 X 16440656..16440928 410..138 1365 100 Minus
X 23542271 X 16440217..16440412 605..410 980 100 Minus
X 23542271 X 16439597..16439762 1107..942 830 100 Minus
X 23542271 X 16439147..16439289 1247..1105 715 100 Minus
X 23542271 X 16441142..16441280 140..2 695 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16447925..16448261 941..605 1685 100 Minus
X 23527363 X 16448754..16449026 410..138 1365 100 Minus
X 23527363 X 16448315..16448510 605..410 980 100 Minus
X 23527363 X 16447695..16447860 1107..942 830 100 Minus
X 23527363 X 16447245..16447387 1247..1105 715 100 Minus
X 23527363 X 16449240..16449378 140..2 695 100 Minus
Blast to na_te.dros performed 2019-03-15 17:14:08
Subject Length Description Subject Range Query Range Score Percent Strand
jockey2 3428 jockey2 JOCKEY2 3428bp 3265..3308 1201..1244 112 72.7 Plus

FI04422.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:15:17 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16329310..16329475 942..1107 100 <- Minus
chrX 16328861..16328999 1108..1246 100 <- Minus
chrX 16329540..16329875 606..941 99 <- Minus
chrX 16329930..16330125 410..605 99 <- Minus
chrX 16330370..16330638 141..409 100 <- Minus
chrX 16330855..16330993 1..140 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:47:45 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 1..1074 80..1153 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:00:53 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 1..1074 80..1153 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:17:25 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 1..1074 80..1153 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:29:34 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 1..1074 80..1153 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:19:04 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 1..1245 2..1246 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:00:53 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 1..1245 2..1246 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:17:25 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 16..1261 1..1246 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-12 15:54:35 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 1..1245 2..1246 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:29:34 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
CG9947-RA 16..1261 1..1246 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:17 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
X 16439148..16439286 1108..1246 100 <- Minus
X 16439597..16439762 942..1107 100 <- Minus
X 16439827..16440162 606..941 100 <- Minus
X 16440217..16440412 410..605 100 <- Minus
X 16440657..16440925 141..409 100 <- Minus
X 16441142..16441280 1..140 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:17 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
X 16439148..16439286 1108..1246 100 <- Minus
X 16439597..16439762 942..1107 100 <- Minus
X 16439827..16440162 606..941 100 <- Minus
X 16440217..16440412 410..605 100 <- Minus
X 16440657..16440925 141..409 100 <- Minus
X 16441142..16441280 1..140 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:17 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
X 16439148..16439286 1108..1246 100 <- Minus
X 16439597..16439762 942..1107 100 <- Minus
X 16439827..16440162 606..941 100 <- Minus
X 16440217..16440412 410..605 100 <- Minus
X 16440657..16440925 141..409 100 <- Minus
X 16441142..16441280 1..140 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:17:25 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16333181..16333319 1108..1246 100 <- Minus
arm_X 16333630..16333795 942..1107 100 <- Minus
arm_X 16333860..16334195 606..941 100 <- Minus
arm_X 16334250..16334445 410..605 100 <- Minus
arm_X 16334690..16334958 141..409 100 <- Minus
arm_X 16335175..16335313 1..140 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:28:04 Download gff for FI04422.complete
Subject Subject Range Query Range Percent Splice Strand
X 16447925..16448260 606..941 100 <- Minus
X 16448315..16448510 410..605 100 <- Minus
X 16448755..16449023 141..409 100 <- Minus
X 16449240..16449378 1..140 99   Minus
X 16447246..16447384 1108..1246 100 <- Minus
X 16447695..16447860 942..1107 100 <- Minus

FI04422.pep Sequence

Translation from 79 to 1152

> FI04422.pep
MSTQQAENEESAAAKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGV
LFIPIGVVLLHLSNTANELIIDYTKCRRSGGNTTCAEYLEANPGVTCPCE
VPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSRDDEQLLGHLSQTPSTDC
APFAYDPDSGKPIAPCGAIANSLFNDTLTLLQGGSEIKLLKTGIAWPSDK
RVKFRNPEGNLNVSLEGFSKPIFWQKGLADLDPENPDNNGFQNEDLIVWM
RTAALPSFRKLYRRLNQTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRM
ILSTTSVLGGKNPFLGIAYIVVGAICITLGLALLFIHMRCSRSNMEMINV
NPHTQYS*

FI04422.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19375-PA 357 GF19375-PA 1..357 1..357 1586 82.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19322-PA 358 GG19322-PA 1..358 1..357 1850 96.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:53:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24164-PA 324 GH24164-PA 1..324 1..357 1449 77 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG9947-PA 357 CG9947-PA 1..357 1..357 1893 100 Plus
CG9947-PB 347 CG9947-PB 1..343 1..343 1816 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:53:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21764-PA 356 GI21764-PA 1..356 1..357 1504 80.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20269-PA 360 GL20269-PA 1..360 1..357 1553 81.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22145-PA 356 GA22145-PA 1..356 1..357 1565 82.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:53:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13400-PA 245 GM13400-PA 1..234 1..234 1153 92.3 Plus
Dsec\GM16207-PA 108 GM16207-PA 1..108 250..357 549 95.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19142-PA 356 GJ19142-PA 1..356 1..357 1518 79.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:53:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16183-PA 356 GK16183-PA 1..356 1..357 1591 82.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:53:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15969-PA 357 GE15969-PA 1..357 1..357 1841 96.1 Plus

FI04422.hyp Sequence

Translation from 79 to 1152

> FI04422.hyp
MSTQQAENEESAAAKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGV
LFIPIGVVLLHLSNTANELIIDYTKCRRSGGNTTCAEYLEANPGVTCPCE
VPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSRDDEQLLGHLSQTPSTDC
APFAYDPDSGKPIAPCGAIANSLFNDTLTLLQGGSEIKLLKTGIAWPSDK
RVKFRNPEGNLNVSLEGFSKPIFWQKGLADLDPENPDNNGFQNEDLIVWM
RTAALPSFRKLYRRLNQTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRM
ILSTTSVLGGKNPFLGIAYIVVGAICITLGLALLFIHMRCSRSNMEMINV
NPHTQYS*

FI04422.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG9947-PA 357 CG9947-PA 1..357 1..357 1893 100 Plus
CG9947-PB 347 CG9947-PB 1..343 1..343 1816 100 Plus