Clone FI04436 Report

Search the DGRC for FI04436

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:36
Vector:pFlc-1
Associated Gene/TranscriptArt7-RB
Protein status:FI04436.pep: gold
Sequenced Size:2236

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Art7 2008-12-18 5.12 accounting

Clone Sequence Records

FI04436.complete Sequence

2236 bp assembled on 2008-10-12

GenBank Submission: BT046131.1

> FI04436.complete
GGCCGGTTTTTATGTTGAGGAATTTGTTAAAGTCACGTTTCCCGGCACCG
CGCAGCATGTCCTGCTTCTCGCACGTGATGAACCCGATAACGGGGCAGAA
CTCCTGGCAGGAGCGCGGCGATGACTACGACTACCACCTGGAGGTGGCCA
ACGCCGGATTCGGCGACATGCTGCACGACTGGGAGCGCAACCAGAAGTAC
TTCGCCGCTCTGAGAAAGACCATAGCCGGAATGCGTGAGGCGGGCAGGGA
GGTGCACGTGCTGGACATCGGCACGGGCACGGGAATCCTGTCGATGATGG
CCTTGGCAGCAGGAGCGGATTCGGTGACCGCTTGCGAGGCCTTCCTGCCA
ATGGCCAATTGCGCGGAGAAAATTCTGGCGGCCAACGGAGCTGGCGACAA
GGTGCGTCTCATCCGAAAGCGATCCACAGAGATCCAAGTGGGCGAGGATA
TGCCGCGAAAGGCGAATCTGCTAGTGGCCGAGCTGCTGGATACAGAACTG
ATTGGCGAGGGTGCCATCGGCATCTACAACCATGCCCACGCCGAACTGCT
GACCGAGGACGCTCTCTGCATTCCCGCGCGCGCCAGATGCTATGCCCAGG
TGGCGCAATCTCCGCTAGCTGCGCAGTGGAACAGCCTGAAAACGATTGCC
AACTTGGACGGCGAACCTTTGCTGCACCCACCGGAGCAGCTGAAGAGCTG
CCAAGGAGAAGCTGCGCTGCACGACGTCCAGCTGTCGCAGCTGCCAAGCT
CCGCATTCCGCCCGCTCACCGATCCCGTCGAGATCTTCCAGTTCGATTTC
CAGCGCAAGCAGGAGCGGGAGAAGCAGCGGTCGCAATTACTAAAGCTGCA
GTCCAAGCAACCGGGAGCCGCTGAGCTGGTCTTCTACTGGTGGGACATTC
AGCTGGACGATGACGGGGAGATATTGCTCAGCTGTGCTCCTTACTGGGCG
CATCCACAGCTGAAGGAGCTGGCAGCTGAGAAGGCGAAGGATCATCCGCT
GCCCAATGTGGTGCCCTGGCGGGATCACTGGATGCAGGCCATCTACTACA
TACCCAAGCCCCTGCAACTGCTCGAGGCAGGTAAATCCTTCCACCTCAGC
TGCCACCACGATGAGTACTCCCTCTGGTTCGATGCACGCGAAGAGGCGCC
CACGAAGAGCGTGCGGCGGCATACCTGCACCTGCGACCTGCACATGACCT
ACTCACGCAGTAGGATTGGCCAGCTCAACCAGTCACCGCGAAACAAGCGC
TACCTGCGCTACCTGGAGGAAAGCATAGAGGCGGAGAAGTCGAATGTCCT
GGTCCTCGGAAACGGCTGCCTGCTGGGACTTGCTAGCTCTGCTTTGGGTG
CTGCGTCTGTGCTGCTCCACGAACCCCATCGCTTCTCGCGTAGATTAATC
GAGTCGATTGTTAAGCACAACCAGCTTAAGAATGTCCAGTTTTTGGACAA
GGTGGAGGAACTGGAGGACTCTCGGCTAGCTGCGCTCACTCACATTTTCG
CTGAGCCCTACTTCCTCAATGCGATTCTACCCTGGGACAACTTCTACTTT
GGCACCCTGCTCACCAAAATCAAGGACAGGCTGCCGGAAGGTGTAAAGAT
TTCGCCATGCTCGGCGCGCATCTATGCTCTTCCCGTGGAGTTTCTCGATC
TGCACAAGATTCGAGCGCCCGTTGGCAGCTGCGAGGGATTTGATCTGCGC
CTGTTTGATGAAATGGTGGAGCGCTCAGCAGAGCAGGCAGTGTCCTTGGT
GGAGGCGCAGCCCCTGTGGGAATATCCCTGTCGCGCACTCTCAGAACCCC
AGGAAGTTCTCAGTGTGGATTTTAGTAACTTTGGCCAAGAGCACAGCCTG
AAGGGCAGCATTGAGCTCAAGCACCCCAGAATCTGCAACGGAGTGGCCTT
ATGGGTGGACTGGCAGTTGGTGGAGGACAATAGCCCCAGATCCATTGTAA
GCAGTGGTCCCAGTGAACCTGTCGTGCCCGGCGAGTTCGTAAAGTGGGAC
ATGTTTGTGAGACAGGGAGTGCACTTTCCAAGGAGACCCAAAGAAGCCAT
TACGCATCTAGAATGGAGCACGGTTTTCAAGCCCCTGCTGGGTGAACTGA
CCTTCAGCTTTGGCCAGAAGAAGCTTTAACGTTATACCATTTATTTATTC
ACAATAATTTGGACAAATTACAACGTGCAACGAACGTCAGGGCAAATAGA
ATTGAATAAGTGAGCAAGCGGAAAAAAAAAAAAAAA

FI04436.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
Art7.a 2458 Art7.a 166..2385 2..2221 11100 100 Plus
Art7-RB 2458 Art7-RB 166..2385 2..2221 11100 100 Plus
CG3085.b 1734 CG3085.b 1564..1734 2221..2051 855 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:29:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18963763..18965482 1721..2 8405 99.2 Minus
chr2R 21145070 chr2R 18963142..18963489 2221..1874 1725 99.7 Minus
chr2R 21145070 chr2R 18963545..18963698 1873..1720 755 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:29:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23077309..23079028 1721..2 8600 100 Minus
2R 25286936 2R 23076688..23077035 2221..1874 1740 100 Minus
2R 25286936 2R 23077091..23077244 1873..1720 770 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:28:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23078508..23080227 1721..2 8600 100 Minus
2R 25260384 2R 23077887..23078234 2221..1874 1740 100 Minus
2R 25260384 2R 23078290..23078443 1873..1720 770 100 Minus
Blast to na_te.dros performed on 2019-03-16 01:29:08 has no hits.

FI04436.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:29:46 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18963142..18963489 1874..2221 99 <- Minus
chr2R 18963545..18963696 1722..1873 99 <- Minus
chr2R 18963763..18965482 1..1721 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:47:53 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 1..2073 57..2129 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:15:07 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 1..2073 57..2129 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:41:03 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 1..2073 57..2129 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:35:17 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 1..2073 57..2129 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:53:53 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 8..2228 1..2221 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:15:06 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 8..2228 1..2221 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:41:03 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 10..2230 1..2221 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-12 16:27:47 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 8..2228 1..2221 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:35:17 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
Art7-RB 10..2230 1..2221 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:29:46 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23076688..23077035 1874..2221 100 <- Minus
2R 23077091..23077242 1722..1873 100 <- Minus
2R 23077309..23079028 1..1721 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:29:46 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23076688..23077035 1874..2221 100 <- Minus
2R 23077091..23077242 1722..1873 100 <- Minus
2R 23077309..23079028 1..1721 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:29:46 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23076688..23077035 1874..2221 100 <- Minus
2R 23077091..23077242 1722..1873 100 <- Minus
2R 23077309..23079028 1..1721 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:41:03 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18964211..18964558 1874..2221 100 <- Minus
arm_2R 18964614..18964765 1722..1873 100 <- Minus
arm_2R 18964832..18966551 1..1721 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:45:53 Download gff for FI04436.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23077905..23078252 1874..2221 100 <- Minus
2R 23078308..23078459 1722..1873 100 <- Minus
2R 23078526..23080245 1..1721 99   Minus

FI04436.pep Sequence

Translation from 2 to 2128

> FI04436.pep
PVFMLRNLLKSRFPAPRSMSCFSHVMNPITGQNSWQERGDDYDYHLEVAN
AGFGDMLHDWERNQKYFAALRKTIAGMREAGREVHVLDIGTGTGILSMMA
LAAGADSVTACEAFLPMANCAEKILAANGAGDKVRLIRKRSTEIQVGEDM
PRKANLLVAELLDTELIGEGAIGIYNHAHAELLTEDALCIPARARCYAQV
AQSPLAAQWNSLKTIANLDGEPLLHPPEQLKSCQGEAALHDVQLSQLPSS
AFRPLTDPVEIFQFDFQRKQEREKQRSQLLKLQSKQPGAAELVFYWWDIQ
LDDDGEILLSCAPYWAHPQLKELAAEKAKDHPLPNVVPWRDHWMQAIYYI
PKPLQLLEAGKSFHLSCHHDEYSLWFDAREEAPTKSVRRHTCTCDLHMTY
SRSRIGQLNQSPRNKRYLRYLEESIEAEKSNVLVLGNGCLLGLASSALGA
ASVLLHEPHRFSRRLIESIVKHNQLKNVQFLDKVEELEDSRLAALTHIFA
EPYFLNAILPWDNFYFGTLLTKIKDRLPEGVKISPCSARIYALPVEFLDL
HKIRAPVGSCEGFDLRLFDEMVERSAEQAVSLVEAQPLWEYPCRALSEPQ
EVLSVDFSNFGQEHSLKGSIELKHPRICNGVALWVDWQLVEDNSPRSIVS
SGPSEPVVPGEFVKWDMFVRQGVHFPRRPKEAITHLEWSTVFKPLLGELT
FSFGQKKL*

FI04436.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11303-PA 690 GF11303-PA 1..689 19..707 3299 87.1 Plus
Dana\GF14044-PA 343 GF14044-PA 19..174 56..215 169 31.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:44:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20071-PA 690 GG20071-PA 1..690 19..708 3573 95.9 Plus
Dere\GG17013-PA 345 GG17013-PA 18..296 39..354 179 25 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23070-PA 704 GH23070-PA 1..694 19..703 2705 71.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:48
Subject Length Description Subject Range Query Range Score Percent Strand
Art7-PB 690 CG9882-PB 1..690 19..708 3648 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:44:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21139-PA 698 GI21139-PA 1..689 19..704 2610 71.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:44:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11301-PA 692 GL11301-PA 1..691 19..707 2989 80 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24672-PA 692 GA24672-PA 1..691 19..707 2991 80 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15586-PA 690 GM15586-PA 1..690 19..708 3605 97.4 Plus
Dsec\GM25897-PA 444 GM25897-PA 79..395 8..354 165 23.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25084-PA 705 GD25084-PA 1..705 4..708 3685 97.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20986-PA 697 GJ20986-PA 1..688 19..704 2716 72.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19600-PA 685 GK19600-PA 1..685 19..708 2549 68.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11609-PA 690 GE11609-PA 1..690 19..708 3547 95.1 Plus
Dyak\GE24405-PA 345 GE24405-PA 18..296 39..354 164 24.5 Plus

FI04436.hyp Sequence

Translation from 2 to 2128

> FI04436.hyp
PVFMLRNLLKSRFPAPRSMSCFSHVMNPITGQNSWQERGDDYDYHLEVAN
AGFGDMLHDWERNQKYFAALRKTIAGMREAGREVHVLDIGTGTGILSMMA
LAAGADSVTACEAFLPMANCAEKILAANGAGDKVRLIRKRSTEIQVGEDM
PRKANLLVAELLDTELIGEGAIGIYNHAHAELLTEDALCIPARARCYAQV
AQSPLAAQWNSLKTIANLDGEPLLHPPEQLKSCQGEAALHDVQLSQLPSS
AFRPLTDPVEIFQFDFQRKQEREKQRSQLLKLQSKQPGAAELVFYWWDIQ
LDDDGEILLSCAPYWAHPQLKELAAEKAKDHPLPNVVPWRDHWMQAIYYI
PKPLQLLEAGKSFHLSCHHDEYSLWFDAREEAPTKSVRRHTCTCDLHMTY
SRSRIGQLNQSPRNKRYLRYLEESIEAEKSNVLVLGNGCLLGLASSALGA
ASVLLHEPHRFSRRLIESIVKHNQLKNVQFLDKVEELEDSRLAALTHIFA
EPYFLNAILPWDNFYFGTLLTKIKDRLPEGVKISPCSARIYALPVEFLDL
HKIRAPVGSCEGFDLRLFDEMVERSAEQAVSLVEAQPLWEYPCRALSEPQ
EVLSVDFSNFGQEHSLKGSIELKHPRICNGVALWVDWQLVEDNSPRSIVS
SGPSEPVVPGEFVKWDMFVRQGVHFPRRPKEAITHLEWSTVFKPLLGELT
FSFGQKKL*

FI04436.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:42:08
Subject Length Description Subject Range Query Range Score Percent Strand
Art7-PB 690 CG9882-PB 1..690 19..708 3648 100 Plus