Clone FI04446 Report

Search the DGRC for FI04446

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:46
Vector:pFlc-1
Associated Gene/TranscriptCG13116-RA
Protein status:FI04446.pep: gold
Sequenced Size:1018

Clone Sequence Records

FI04446.complete Sequence

1018 bp assembled on 2009-05-13

GenBank Submission: BT083431.1

> FI04446.complete
TTTTTAGTCACGAAGCCTTAACCAAGCCGCATCGAAACGCGAATAGATCG
AAGCCTAGCCACCATGTTTCAGAAAAGGATTATCGAGCTGATCACGGTGC
TGGTGTATTGGGTGATCATCACGCCCACCACCTACAAGTACTGCACACAA
AACGGAATAATTAGGATGAGCTTTGACACCCTGGTTGGCACTGTGGGCGA
TCACTGCACCCTGGCCCTCTGCCTGATGATCGGATACGTTGTCTTCTACC
GTATCATTATCTTCATTTACATGAAGTTGAAGGTCTGTGACATTCGGATG
TGGGATGAACTGCAGCGAGCCAAAGAGGATCCGGAGGCGCATCTGGACAA
AAAGTCCTACTACCAGCCCGTCTCCACCGAGAATATCGATGTCGTGGACT
CTGGCAAGAAGAAGAACAAGCCAACGACTCCGAAGATGATAAGGACCATC
AGCAATCCGCTGCTCATCGAAAGCGATCTGGCGCGCATTCACATCAAGCA
CGAAACACGGCCTTTGGAAAGTGCCACCCTACCCAGACTGCAGCAGGCAA
TGGTCCACCCTAGTCCGAGTCCCAGCTTGAGGAGCGCACCACCAGTGCCC
CAAATGCAGAAAAGTGCCACTCTACCGAATCAGCACAGCAAAGGTGTGAT
TATGTCTCCCAAAGTTCTAATGCCCAGAACTCAACAGGTGTAGACAGCGA
GTGATTAGTGCTTTAAAGTGTGCTCATGATTGCGATTACCAGTCTTAGTT
TCTGTGAAATTTTGAGCTCAACTTAAGAGGACTACGTCCGCATTCAAGTA
TTAGCTACTGCCCAAAGATCGATAATCGAAATAAACCCGAAATTAGTCAA
TTATCACATTCCAGTGTACTCGTTCGCGCGAGCTAAATTAATAGTTTAGT
TAGTGAATATATTTATTACTAGACGTAAGACAGATATTGTTATCCATGCG
TAAATATGCGTGAGTTTATTAAAGCTAAATAAATTAAATGCATCTCTTGT
AAAACAAAAAAAAAAAAA

FI04446.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13116-RA 1006 CG13116-RA 4..1006 3..1005 5015 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9728759..9729761 3..1005 4790 98.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9729943..9730949 3..1009 5020 99.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9729943..9730949 3..1009 5020 99.9 Plus
Blast to na_te.dros performed 2019-03-15 16:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
Fw3 3132 Fw3 FW3 3132bp 1977..2042 395..459 111 65.2 Plus

FI04446.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:35:39 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9728756..9729761 1..1005 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:34 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
CG13116-RA 1..630 64..693 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:52:02 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
CG13116-RA 1..630 64..693 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:19:09 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
CG13116-RA 1..630 64..693 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:42:45 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
CG13116-RA 1..630 64..693 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 17:00:03 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
CG13116-RA 1..1006 2..1005 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:52:01 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
CG13116-RA 1..1006 2..1005 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:19:09 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
CG13116-RA 1..1006 2..1005 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:42:45 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
CG13116-RA 1..1006 2..1005 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:35:39 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9729940..9730945 1..1005 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:35:39 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9729940..9730945 1..1005 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:35:39 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9729940..9730945 1..1005 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:19:09 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9729940..9730945 1..1005 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:42:49 Download gff for FI04446.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9729940..9730945 1..1005 99   Plus

FI04446.pep Sequence

Translation from 63 to 692

> FI04446.pep
MFQKRIIELITVLVYWVIITPTTYKYCTQNGIIRMSFDTLVGTVGDHCTL
ALCLMIGYVVFYRIIIFIYMKLKVCDIRMWDELQRAKEDPEAHLDKKSYY
QPVSTENIDVVDSGKKKNKPTTPKMIRTISNPLLIESDLARIHIKHETRP
LESATLPRLQQAMVHPSPSPSLRSAPPVPQMQKSATLPNQHSKGVIMSPK
VLMPRTQQV*

FI04446.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22794-PA 199 GF22794-PA 1..199 1..209 653 62.1 Plus
Dana\GF22799-PA 177 GF22799-PA 1..160 1..179 222 30.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10050-PA 209 GG10050-PA 1..209 1..209 1079 96.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25140-PA 222 GH25140-PA 1..212 1..208 594 55.6 Plus
Dgri\GH17544-PA 168 GH17544-PA 1..142 1..144 458 58.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG13116-PB 209 CG13116-PB 1..209 1..209 1089 100 Plus
CG13116-PA 209 CG13116-PA 1..209 1..209 1089 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20021-PA 216 GI20021-PA 1..212 1..209 621 58.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18929-PA 221 GL18929-PA 1..201 1..205 723 66.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12057-PA 203 GA12057-PA 1..197 1..204 751 69.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17658-PA 209 GM17658-PA 1..209 1..209 1098 99 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23624-PA 209 GD23624-PA 1..209 1..209 1107 99.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13449-PA 214 GJ13449-PA 1..207 1..209 638 59.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24187-PA 202 GK24187-PA 1..199 1..203 593 59 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18864-PA 209 GE18864-PA 1..209 1..209 1076 96.2 Plus

FI04446.hyp Sequence

Translation from 63 to 692

> FI04446.hyp
MFQKRIIELITVLVYWVIITPTTYKYCTQNGIIRMSFDTLVGTVGDHCTL
ALCLMIGYVVFYRIIIFIYMKLKVCDIRMWDELQRAKEDPEAHLDKKSYY
QPVSTENIDVVDSGKKKNKPTTPKMIRTISNPLLIESDLARIHIKHETRP
LESATLPRLQQAMVHPSPSPSLRSAPPVPQMQKSATLPNQHSKGVIMSPK
VLMPRTQQV*

FI04446.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG13116-PB 209 CG13116-PB 1..209 1..209 1089 100 Plus
CG13116-PA 209 CG13116-PA 1..209 1..209 1089 100 Plus