Clone FI04466 Report

Search the DGRC for FI04466

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:66
Vector:pFlc-1
Associated Gene/TranscriptCG11030-RA
Protein status:FI04466.pep: gold
Sequenced Size:1814

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11030 2008-12-18 5.12 accounting

Clone Sequence Records

FI04466.complete Sequence

1814 bp assembled on 2008-12-12

GenBank Submission: BT046133.2

> FI04466.complete
CTCTGGCCATCGCAGCTGACTCTAGAACGCGTCGTGGAAATAGGAATAAA
CTGACTGAGTTCGCGTTCGGTTCGTTTGGCGCACGCAAAGCAAGCAAGTA
GTGAGCCAGATGCGGTTCGAAACGGTGCAGTCAACTGAAGCTCGCGTAGT
GCAATACAATTAATTGTAAAACCAAGACACAAGCACTCCTATCGCGATAG
GCACTGTTAGCAAATTGAAACCGCGTGTCTTTCGTTTCGCTTCTCCCGCT
CTTTCGTTGCACTTCGCCCACACTATTCGCCAATGCAGTCGTGAGTGCGT
GTGTGCGTGCGTATTCCCCCCCAAATTCAATGAATTCGACAGGCGGTGCA
ATAAAAGCGCAACTAAAACAAAAGTGATTCCACCACGTGCGCCACTCTCT
CGCGTCTTAAGTTCAGTTGTTGTAGCTGGTTTCGTTTGTTTTGCTGGCGT
CTCGCTCTAACAGCTCCCACTGCTAAATTTACCGCTCGCCGAACAACCGG
CACGGAAATATCCGTTGGATTAGGAGGACTCACTAACGGGACACCCGCAA
AAGGACATCAAAATGGTGCAGGCACTGGACTACGATTGCGAGGCACAGGG
CCAGGACATCCCGCAGGCGATTCAGTTGCTCGGGGAGATGAACAGCAATG
TGAAACAGGTGACTGACTTGGTGGAGGGCATGCTGCAGCGAGTCAAGCGA
GGCGAGCTAACCACAGAGTACGGCCTGAGCTTTCTGGAAGTGAAGTACCA
CATGCTACTGGACTACTTGATCAATCTGACATATGTGGTGCTGCGCAAAT
GCTCCGGCGAGACCATTGAGGGTGATCCCTCCATCGAACGTCTGATCGAG
ATTCGCACTGTGCTGGAGAAGATTCGGCCCATAGACCACAAGCTACGCTA
TCAGATTGACAAACTGGTAAAGACAGCCACCACTGGCGTCTCAAGCAGTA
CGGATCCCATACTTTACAAACCCAACCCAGATGATATGATGAGCAGCGCA
GGCGGAGCAGGCCGAGATGAGGATGATGGAGAAGATGACAGCGATGAGGA
GGACGAGGACGACGATGAGGAGGATGAGGACGAGGCCGGCGCAGCGAAAA
TGCCCCGGAAAGCGGCCACAGCCGGAAAGTCCGGAGTGTACGTGCCACCG
CGCATCAAGCCCGTTTATTACGATGGCGATGAACGCGATGCCGACAAGGA
GAAAAAGGCACTGGATCGGGCCAAGAAGCGGGCCATTACGTCTTCCATGC
TGCAGGACCTCAAAGAGGAGTACTTGGATGCTCCTACAGAGATTTCATCT
GGTTCGCGTGCTCAGCAGATGCTTTCTCAAGCTCAGAAGGAGAAGCAGGA
GTACGAGGAGACCTACTTGATGCGTCTGCCGGTGACCAAGGCGGAGAAGC
ATCGCCAGCGAAAACTGACCACCTTGGGCACACTTGGCGATGAAATTCTT
GGGGAGATCAGTCGGGAATCAGCCCTGCGTGGAGATGGAAGCAAAAAGCG
CAAACTGGCCAAAAAGGGGAAGGGAAAGAAACGTGGCGGTAAAAAGCGAA
AATTCCATTAATTGGTGGCACAAAATATCCTATTTAAGTAAGAACATTTT
TTAGGTTATAAATAAAGTGTAGGCGTTTTAATGCCGTTCTATATGTTTTA
AATTGCTTTAAAAAGTTAAGTTTCCCCTTCATTTTGATTCTGATTGTCAT
ATACTTTTGATTCTTAAACATTTATATTTTATTGCTTAATGTTAAGTTTT
TCCAATTTATGTTTAAATGAATTTTTATTAAAATGTTCTTATATTACGAA
AAAAAAAAAAAAAA

FI04466.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:15:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG11030-RA 1796 CG11030-RA 50..1796 1..1747 8735 100 Plus
CG11030.b 1059 CG11030.b 69..1059 571..1561 4955 100 Plus
CG11030.c 1615 CG11030.c 626..1615 572..1561 4950 100 Plus
CG11030.c 1615 CG11030.c 1..572 1..572 2860 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5757766..5758437 570..1241 3300 99.4 Plus
chr2L 23010047 chr2L 5723768..5724339 1..572 2845 99.8 Plus
chr2L 23010047 chr2L 5758749..5759118 1427..1796 1850 100 Plus
chr2L 23010047 chr2L 5758502..5758690 1240..1428 930 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5758693..5759364 570..1241 3360 100 Plus
2L 23513712 2L 5724658..5725229 1..572 2860 100 Plus
2L 23513712 2L 5759676..5760052 1427..1803 1870 99.7 Plus
2L 23513712 2L 5759429..5759617 1240..1428 945 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:32:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5758693..5759364 570..1241 3360 100 Plus
2L 23513712 2L 5724658..5725229 1..572 2860 100 Plus
2L 23513712 2L 5759676..5760052 1427..1803 1870 99.7 Plus
2L 23513712 2L 5759429..5759617 1240..1428 945 100 Plus
Blast to na_te.dros performed 2019-03-15 21:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 3788..3932 694..557 148 60.7 Minus
TAHRE 10463 TAHRE OSV 10463bp 7155..7210 694..639 118 67.9 Minus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 7105..7178 1652..1581 113 63.5 Minus

FI04466.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:07:09 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5723768..5724338 1..571 99 -> Plus
chr2L 5757768..5758211 572..1015 99 == Plus
chr2L 5758288..5758435 1092..1239 100 -> Plus
chr2L 5758502..5758689 1240..1427 99 -> Plus
chr2L 5758750..5759073 1428..1751 100 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:38:16 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 1..999 563..1561 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:22:22 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 1..999 563..1561 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:38:15 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 1..999 563..1561 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:44:04 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 1..999 563..1561 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:38:13 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 1..1561 1..1561 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:22:22 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 1..1798 1..1798 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:38:15 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 3..1800 1..1798 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-12 16:27:39 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 1..1561 254..1814 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:04 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
CG11030-RA 3..1800 1..1798 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:07:09 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5724658..5725228 1..571 100 -> Plus
2L 5758695..5759362 572..1239 100 -> Plus
2L 5759429..5759616 1240..1427 100 -> Plus
2L 5759677..5760047 1428..1798 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:07:09 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5724658..5725228 1..571 100 -> Plus
2L 5758695..5759362 572..1239 100 -> Plus
2L 5759429..5759616 1240..1427 100 -> Plus
2L 5759677..5760047 1428..1798 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:07:09 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5724658..5725228 1..571 100 -> Plus
2L 5758695..5759362 572..1239 100 -> Plus
2L 5759429..5759616 1240..1427 100 -> Plus
2L 5759677..5760047 1428..1798 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:38:15 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5724658..5725228 1..571 100 -> Plus
arm_2L 5758695..5759362 572..1239 100 -> Plus
arm_2L 5759429..5759616 1240..1427 100 -> Plus
arm_2L 5759677..5760047 1428..1798 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:54:06 Download gff for FI04466.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5759429..5759616 1240..1427 100 -> Plus
2L 5724658..5725228 1..571 100 -> Plus
2L 5758695..5759362 572..1239 100 -> Plus
2L 5759677..5760047 1428..1798 99   Plus

FI04466.hyp Sequence

Translation from 562 to 1560

> FI04466.hyp
MVQALDYDCEAQGQDIPQAIQLLGEMNSNVKQVTDLVEGMLQRVKRGELT
TEYGLSFLEVKYHMLLDYLINLTYVVLRKCSGETIEGDPSIERLIEIRTV
LEKIRPIDHKLRYQIDKLVKTATTGVSSSTDPILYKPNPDDMMSSAGGAG
RDEDDGEDDSDEEDEDDDEEDEDEAGAAKMPRKAATAGKSGVYVPPRIKP
VYYDGDERDADKEKKALDRAKKRAITSSMLQDLKEEYLDAPTEISSGSRA
QQMLSQAQKEKQEYEETYLMRLPVTKAEKHRQRKLTTLGTLGDEILGEIS
RESALRGDGSKKRKLAKKGKGKKRGGKKRKFH*

FI04466.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:42:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11030-PB 332 CG11030-PB 1..332 1..332 1690 100 Plus
CG11030-PA 332 CG11030-PA 1..332 1..332 1690 100 Plus

FI04466.pep Sequence

Translation from 562 to 1560

> FI04466.pep
MVQALDYDCEAQGQDIPQAIQLLGEMNSNVKQVTDLVEGMLQRVKRGELT
TEYGLSFLEVKYHMLLDYLINLTYVVLRKCSGETIEGDPSIERLIEIRTV
LEKIRPIDHKLRYQIDKLVKTATTGVSSSTDPILYKPNPDDMMSSAGGAG
RDEDDGEDDSDEEDEDDDEEDEDEAGAAKMPRKAATAGKSGVYVPPRIKP
VYYDGDERDADKEKKALDRAKKRAITSSMLQDLKEEYLDAPTEISSGSRA
QQMLSQAQKEKQEYEETYLMRLPVTKAEKHRQRKLTTLGTLGDEILGEIS
RESALRGDGSKKRKLAKKGKGKKRGGKKRKFH*

FI04466.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15579-PA 414 GF15579-PA 88..392 2..310 1310 88.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:43:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25095-PA 330 GG25095-PA 2..330 4..332 1676 98.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:43:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11046-PA 338 GH11046-PA 1..322 1..317 1394 88.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG11030-PB 332 CG11030-PB 1..332 1..332 1690 100 Plus
CG11030-PA 332 CG11030-PA 1..332 1..332 1690 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17563-PA 334 GI17563-PA 4..318 4..317 1397 88.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19032-PA 312 GL19032-PA 1..294 26..316 1290 92.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:43:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10717-PA 349 GA10717-PA 13..331 2..316 1399 92.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18570-PA 330 GM18570-PA 2..308 4..310 1337 96.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:43:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23361-PA 314 GD23361-PA 2..314 4..332 1560 93.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15647-PA 335 GJ15647-PA 1..319 1..317 1374 88.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:43:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14692-PA 349 GK14692-PA 10..332 4..317 1290 87 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25614-PA 330 GE25614-PA 2..330 4..332 1661 97.3 Plus