Clone FI04471 Report

Search the DGRC for FI04471

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:71
Vector:pFlc-1
Associated Gene/Transcriptdare-RA
Protein status:FI04471.pep: gold
Sequenced Size:1694

Clone Sequence Records

FI04471.complete Sequence

1694 bp assembled on 2009-05-13

GenBank Submission: BT083432.1

> FI04471.complete
GCTGGCGAAAGTCTTTCGAGAGATAACGAGTAAATAAGAAATCATCGTTA
GCAAAAAACTTTTTTGAGAAGATCACCTAGCAAACCGACTGATTATCTGT
AAGATACGAAAACGAGCTGCTTTCCCAGTAGCAGAGATCGGCGACTGATC
CACGATGGGCATCAATTGCCTTAACATCTTCAGACGTGGCCTCCACACGA
GTTCCGCCCGATTGCAGGTGATCCAGAGCACCACGCCCACCAAGCGGATA
TGCATCGTAGGCGCCGGACCCGCCGGCTTCTATGCCGCCCAATTGATCCT
CAAGCAGCTGGACAATTGCGTGGTGGATGTGGTCGAGAAGCTGCCGGTTC
CCTTCGGACTGGTGCGCTTTGGCGTTGCGCCCGATCATCCGGAGGTCAAG
AACGTAATCAACACCTTCACCAAGACCGCCGAGCATCCGCGTCTGCGTTA
CTTTGGCAACATATCGCTGGGTACGGATGTCAGCCTGCGTGAGCTAAGAG
ATCGATACCATGCCGTGCTCCTCACCTACGGAGCGGACCAGGATCGGCAA
CTAGAGCTGGAGAACGAGCAGTTGGATAATGTGATATCAGCCCGGAAATT
TGTGGCCTGGTATAATGGATTGCCGGGTGCGGAAAACTTGGCTCCGGATC
TGAGCGGTCGCGATGTCACGATTGTGGGTCAGGGAAACGTGGCTGTGGAT
GTGGCTAGGATGCTGCTCAGTCCCTTGGATGCTTTGAAGACTACGGACAC
AACTGAGTACGCCTTGGAAGCGCTTTCTTGCAGCCAAGTGGAACGAGTCC
ATTTGGTTGGCCGACGAGGTCCTCTGCAAGCTGCCTTCACCATTAAGGAG
CTGAGGGAGATGCTCAAGCTGCCCAATGTAGACACCCGGTGGCGTACAGA
GGATTTCTCGGGCATTGACATGCAGCTGGATAAACTTCAGCGGCCTCGCA
AGAGACTTACCGAACTGATGCTTAAGAGTCTAAAGGAGCAGGGCAGGATC
TCTGGCTCAAAACAATTCCTGCCCATCTTTCTGCGCGCTCCGAAGGCGAT
AGCCCCAGGGGAAATGGAGTTTTCTGTCACGGAACTGCAGCAGGAAGCAG
CAGTGCCCACCAGTTCCACAGAGCGTCTTCCCTCGCACTTAATCCTGCGC
AGCATTGGCTACAAATCTAGTTGCGTGGATACGGGCATCAACTTTGACAC
TCGACGCGGTCGCGTTCACAACATTAATGGTCGTATTCTTAAGGATGATG
CTACGGGAGAGGTTGACCCTGGACTTTATGTAGCTGGCTGGCTAGGAACT
GGGCCCACTGGCGTTATTGTGACCACCATGAACGGCGCCTTTGCGGTAGC
CAAGACCATCTGCGATGACATAAACACGAATGCTCTGGACACCAGTTCTG
TCAAACCAGGATACGATGCGGATGGCAAACGAGTGGTTACTTGGGATGGC
TGGCAGAGAATCAATGATTTCGAGAGCGCAGCGGGAAAAGCCAAGGGAAA
GCCGCGCGAGAAGATTGTTAGCATTGAGGAAATGTTACGGGTGGCTGGCG
TCTGATGCCAGGATTCCATGGGTTGCGGTTGACAATAGTTTCCTTTTATA
ACCAATCTAGTGTTCTTTATTTATCTGTCGTTTGAGGCCTTTGTTATTCG
TTGTAAATACACAAGTCATTTATAAAACAAAAAAAAAAAAAAAA

FI04471.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
dare-RA 1687 dare-RA 1..1680 1..1680 8400 100 Plus
CG30033-RB 1007 CG30033-RB 220..585 366..1 1830 100 Minus
CG18335-RA 1289 CG18335-RA 1..45 1636..1680 225 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 7178426..7179193 1678..911 3825 99.9 Minus
chr2R 21145070 chr2R 7179479..7179852 739..366 1870 100 Minus
chr2R 21145070 chr2R 7180239..7180604 366..1 1815 99.7 Minus
chr2R 21145070 chr2R 7179250..7179424 912..738 875 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11290992..11291761 1680..911 3850 100 Minus
2R 25286936 2R 11292046..11292419 739..366 1870 100 Minus
2R 25286936 2R 11292806..11293171 366..1 1830 100 Minus
2R 25286936 2R 11291817..11291991 912..738 875 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:20:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 11292191..11292960 1680..911 3850 100 Minus
2R 25260384 2R 11293245..11293618 739..366 1870 100 Minus
2R 25260384 2R 11294005..11294370 366..1 1830 100 Minus
2R 25260384 2R 11293016..11293190 912..738 875 100 Minus
Blast to na_te.dros performed on 2019-03-15 18:39:44 has no hits.

FI04471.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:40:30 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 7178426..7179192 912..1678 99 <- Minus
chr2R 7179251..7179422 740..911 100 <- Minus
chr2R 7179479..7179851 367..739 100 <- Minus
chr2R 7180239..7180604 1..366 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:35 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
dare-RA 1..1401 155..1555 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:52:03 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
dare-RA 1..1401 155..1555 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:26:41 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
dare-RA 1..1401 155..1555 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:22 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
dare-RA 1..1401 155..1555 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 17:03:53 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
dare-RA 1..1678 1..1678 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:52:03 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
dare-RA 1..1678 1..1678 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:26:41 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
dare-RA 4..1681 1..1678 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:22 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
dare-RA 4..1681 1..1678 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:30 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11290994..11291760 912..1678 100 <- Minus
2R 11291818..11291989 740..911 100 <- Minus
2R 11292046..11292418 367..739 100 <- Minus
2R 11292806..11293171 1..366 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:30 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11290994..11291760 912..1678 100 <- Minus
2R 11291818..11291989 740..911 100 <- Minus
2R 11292046..11292418 367..739 100 <- Minus
2R 11292806..11293171 1..366 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:30 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11290994..11291760 912..1678 100 <- Minus
2R 11291818..11291989 740..911 100 <- Minus
2R 11292046..11292418 367..739 100 <- Minus
2R 11292806..11293171 1..366 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:26:41 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7179323..7179494 740..911 100 <- Minus
arm_2R 7178499..7179265 912..1678 100 <- Minus
arm_2R 7179551..7179923 367..739 100 <- Minus
arm_2R 7180311..7180676 1..366 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:42:50 Download gff for FI04471.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11292193..11292959 912..1678 100 <- Minus
2R 11293017..11293188 740..911 100 <- Minus
2R 11293245..11293617 367..739 100 <- Minus
2R 11294005..11294370 1..366 100   Minus

FI04471.hyp Sequence

Translation from 154 to 1554

> FI04471.hyp
MGINCLNIFRRGLHTSSARLQVIQSTTPTKRICIVGAGPAGFYAAQLILK
QLDNCVVDVVEKLPVPFGLVRFGVAPDHPEVKNVINTFTKTAEHPRLRYF
GNISLGTDVSLRELRDRYHAVLLTYGADQDRQLELENEQLDNVISARKFV
AWYNGLPGAENLAPDLSGRDVTIVGQGNVAVDVARMLLSPLDALKTTDTT
EYALEALSCSQVERVHLVGRRGPLQAAFTIKELREMLKLPNVDTRWRTED
FSGIDMQLDKLQRPRKRLTELMLKSLKEQGRISGSKQFLPIFLRAPKAIA
PGEMEFSVTELQQEAAVPTSSTERLPSHLILRSIGYKSSCVDTGINFDTR
RGRVHNINGRILKDDATGEVDPGLYVAGWLGTGPTGVIVTTMNGAFAVAK
TICDDINTNALDTSSVKPGYDADGKRVVTWDGWQRINDFESAAGKAKGKP
REKIVSIEEMLRVAGV*

FI04471.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
dare-PA 466 CG12390-PA 1..466 1..466 2394 100 Plus

FI04471.pep Sequence

Translation from 154 to 1554

> FI04471.pep
MGINCLNIFRRGLHTSSARLQVIQSTTPTKRICIVGAGPAGFYAAQLILK
QLDNCVVDVVEKLPVPFGLVRFGVAPDHPEVKNVINTFTKTAEHPRLRYF
GNISLGTDVSLRELRDRYHAVLLTYGADQDRQLELENEQLDNVISARKFV
AWYNGLPGAENLAPDLSGRDVTIVGQGNVAVDVARMLLSPLDALKTTDTT
EYALEALSCSQVERVHLVGRRGPLQAAFTIKELREMLKLPNVDTRWRTED
FSGIDMQLDKLQRPRKRLTELMLKSLKEQGRISGSKQFLPIFLRAPKAIA
PGEMEFSVTELQQEAAVPTSSTERLPSHLILRSIGYKSSCVDTGINFDTR
RGRVHNINGRILKDDATGEVDPGLYVAGWLGTGPTGVIVTTMNGAFAVAK
TICDDINTNALDTSSVKPGYDADGKRVVTWDGWQRINDFESAAGKAKGKP
REKIVSIEEMLRVAGV*

FI04471.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12417-PA 468 GF12417-PA 1..467 1..465 2066 83.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22675-PA 466 GG22675-PA 1..466 1..466 2363 94.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21932-PA 479 GH21932-PA 13..479 6..466 1888 74.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:26
Subject Length Description Subject Range Query Range Score Percent Strand
dare-PA 466 CG12390-PA 1..466 1..466 2394 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:26:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19640-PA 479 GI19640-PA 12..479 3..466 1862 73.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:26:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16741-PA 466 GL16741-PA 1..466 1..466 1987 80.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:26:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11603-PA 468 GA11603-PA 1..468 1..466 2033 81.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20453-PA 466 GM20453-PA 1..466 1..466 2409 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25921-PA 466 GD25921-PA 1..466 1..466 2412 97.6 Plus
Dsim\GD15255-PA 402 GD15255-PA 8..402 72..466 2047 97.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15006-PA 481 GJ15006-PA 15..481 6..466 1865 76.2 Plus
Dvir\GJ12156-PA 2125 GJ12156-PA 1767..1925 23..183 156 31.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21620-PA 463 GK21620-PA 1..463 8..466 1817 75.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13030-PA 466 GE13030-PA 1..466 1..466 2340 94.2 Plus