Clone FI04485 Report

Search the DGRC for FI04485

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:85
Vector:pFlc-1
Associated Gene/TranscriptCG17834-RA
Protein status:FI04485.pep: gold
Sequenced Size:1858

Clone Sequence Records

FI04485.complete Sequence

1858 bp assembled on 2009-05-27

GenBank Submission: BT088438.1

> FI04485.complete
AGTTAGCCGACGATTGTTGAACCCGACAGACGTGCGCGCAGCTCGATCGA
TCGATCGTCGAGCTTTACCCGTTTTTCCCACTGTGTTTTTTCGACAATTT
CGCGTGCAAAGCGTGATCATTATTGCTCAAAAATTGCTTTTGTGTTTTGT
CCAAGTGTGACGCAGTTTTTAGCAAAGGTTCTGTGGAACTGCGAACGAGA
TCAGCATATAATAAAAAAAACCCTTAAATCATAAATTAATCAAAGCATTG
TTACAACACAACAACGATTTTCGGACTCGGATTCTCTTCATTTTTTATTC
GAGCGGAGAGTAAATAAAGTCAAGAAAACAAGAGGAAGAGGGAGAGCGGT
AGGGAGCCAACAACAAAATGTGCCGCTGCTGTCAAAACTGCTGGGAAGAT
TTCTACTGGAATTGCTTCGAGGAGCGTTTCTGCTACGACGAATCCATCGC
CAACTACAATCCCGAGGAGGACGAGGACTACTTGGCGTCCAGGAAAAATG
GCCAGATCATTGGACGCATACAACCGACATCGGTGGATAATAATAATTCG
CTGACGGTGCCCCAACCGATTTGCGATCAGCCGCAAATGAGGCAGGGCAA
CTCGAGCTTGGGCCTGAGCCTAATGAGCGCCAAGATCCACGAGGAGGACT
ATCGTCGGGAGACACAGATCAATGTGCCCAACCTGGGACCGGAGATACTG
GCGGTTTTTGCCAATTCGCAAATCTTCCAGGACCATCAGCCCACCAAGCT
GAACCGGATCAGCACCAAGACTTATCTGGCCGGAATCCATTCGCCGAATC
GCGAAATGCCGACAACTCCGCGGCTCAGCGATCAGGATCGATTGCTGCGA
CGTCTGGAAGGAGATGCCACTGATGCGAGAACAGGATCGACCGAGAAGCG
AATCACCTTCACCCTGGCTCCCAGTTCGGCCGAATGCTCGCCGTCGGGTA
GCCAAACGACACTTACTCCCAAAAAGTTCGAGGCCATTGCCGAGGAGGAG
AAGGAGGACGACAAGGCCGATGAGGAGGAGGAGATCATGGAGGAGGTGGT
GCTGCGACCTCGCCTCATCGACCGGCATCCTCATCTGCTGGCCAACCCCA
GTGGACTGACGACCACGCCCAAACGGATCCTGCGATCCGCCAAGAGCGTT
CCGCACATGAATGTCCGTTCGTCGGCCAGTGAGACGGATATATTCTCCAT
TAGCGGTACGATGACCGGAAGCAGTCAGATCAGCATGACGCCGGAGGTGC
CATCGATATCGTTCAGTAATCTGCCTAAGAACTACGAGGACACGCCCACT
ATTGAGAAGTACCGGGTATCGCAGAGTCTCTATTCCATTCAAACGGCGAA
TGCTGCTCGGGCCACACAGGATGATTACTCCATGCCGCGCTACTTCCGTC
GATCTGCCATGCTATTGACCCAGAGCTCTGAGGTGCTGCCCGGCGCCAGT
TCACTGGCCTCCATGTCGCCATCGATGGCCTCGTCCTCTGCCTCGCCCGG
GTCCTCCAAGGACGAACTGCGACGGCCAGAGAAGGAGAAGAGCAAACGAC
TCCAGATGCTGCGTGGCAATCTACCGCCCTTACTTATTCATTCCGTGTCC
TTCAAACGAAATCGCGACGAGGGCAAGCAGGTTGACTAGTCGCACTGCAG
ATATACATATTTATTTGTTAATCACTTTGTCCATGTTTTTAATGTTTTAA
ATTTATTAGCCTTTAGTACCTGCTTATGCGTTTTCTGTATTATCTTCTAA
GCAATGACCTTGTCCAAACAATTCCTCAGTATTCAGATGTACTTCATTTT
GAATTAATGATTGATATTACAAAATAAATTGTATTTTACCACAAAAAAAA
AAAAAAAA

FI04485.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG17834-RC 1967 CG17834-RC 44..1891 1..1848 9210 99.8 Plus
CG17834-RA 2114 CG17834-RA 416..2038 226..1848 8085 99.8 Plus
CG17834.a 1815 CG17834.a 578..1798 628..1848 6090 99.9 Plus
CG17834-RA 2114 CG17834-RA 1..225 1..225 1125 100 Plus
CG17834.a 1815 CG17834.a 1..225 1..225 1125 100 Plus
CG17834.a 1815 CG17834.a 416..578 226..388 800 99.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:37:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 8539348..8540331 859..1842 4740 98.8 Plus
chr2L 23010047 chr2L 8536122..8536357 626..861 1165 99.6 Plus
chr2L 23010047 chr2L 8528050..8528274 1..225 1125 100 Plus
chr2L 23010047 chr2L 8535786..8535964 449..627 895 100 Plus
chr2L 23010047 chr2L 8534811..8534972 226..387 795 99.4 Plus
chr2L 23010047 chr2L 8535100..8535161 388..449 310 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:13:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:37:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8540456..8541445 859..1848 4950 100 Plus
2L 23513712 2L 8537229..8537464 626..861 1165 99.6 Plus
2L 23513712 2L 8529143..8529367 1..225 1125 100 Plus
2L 23513712 2L 8536893..8537071 449..627 895 100 Plus
2L 23513712 2L 8535918..8536079 226..387 795 99.4 Plus
2L 23513712 2L 8536207..8536268 388..449 310 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:47:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8540456..8541445 859..1848 4950 100 Plus
2L 23513712 2L 8537229..8537464 626..861 1165 99.5 Plus
2L 23513712 2L 8529143..8529367 1..225 1125 100 Plus
2L 23513712 2L 8536893..8537071 449..627 895 100 Plus
2L 23513712 2L 8535918..8536079 226..387 795 99.3 Plus
2L 23513712 2L 8536207..8536268 388..449 310 100 Plus
Blast to na_te.dros performed on 2019-03-16 18:37:35 has no hits.

FI04485.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:38:41 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 8528050..8528274 1..225 100 -> Plus
chr2L 8534811..8534972 226..387 99 -> Plus
chr2L 8535100..8535161 388..449 100 -> Plus
chr2L 8535787..8535964 450..627 100 -> Plus
chr2L 8536124..8536356 628..860 99 -> Plus
chr2L 8539350..8539480 861..991 97 == Plus
chr2L 8539539..8540331 1050..1842 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:59:45 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
CG17834-RC 1..1272 368..1639 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:46:39 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
CG17834-RC 1..1272 368..1639 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:49:56 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
CG17834-RA 1..1272 368..1639 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:44:10 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
CG17834-RA 1..1272 368..1639 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:59:43 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
CG17834-RC 1..1842 1..1842 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:46:38 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
CG17834-RC 1..1842 1..1842 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:56 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
CG17834-RC 3..1844 1..1842 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:44:10 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
CG17834-RC 3..1844 1..1842 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:41 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8529143..8529367 1..225 100 -> Plus
2L 8535918..8536079 226..387 99 -> Plus
2L 8536207..8536268 388..449 100 -> Plus
2L 8536894..8537071 450..627 100 -> Plus
2L 8537231..8537463 628..860 99 -> Plus
2L 8540458..8541439 861..1842 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:41 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8529143..8529367 1..225 100 -> Plus
2L 8535918..8536079 226..387 99 -> Plus
2L 8536207..8536268 388..449 100 -> Plus
2L 8536894..8537071 450..627 100 -> Plus
2L 8537231..8537463 628..860 99 -> Plus
2L 8540458..8541439 861..1842 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:41 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8529143..8529367 1..225 100 -> Plus
2L 8535918..8536079 226..387 99 -> Plus
2L 8536207..8536268 388..449 100 -> Plus
2L 8536894..8537071 450..627 100 -> Plus
2L 8537231..8537463 628..860 99 -> Plus
2L 8540458..8541439 861..1842 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:56 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8529143..8529367 1..225 100 -> Plus
arm_2L 8535918..8536079 226..387 99 -> Plus
arm_2L 8536207..8536268 388..449 100 -> Plus
arm_2L 8536894..8537071 450..627 100 -> Plus
arm_2L 8537231..8537463 628..860 99 -> Plus
arm_2L 8540458..8541439 861..1842 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:22:00 Download gff for FI04485.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8529143..8529367 1..225 100 -> Plus
2L 8535918..8536079 226..387 99 -> Plus
2L 8536207..8536268 388..449 100 -> Plus
2L 8536894..8537071 450..627 100 -> Plus
2L 8537231..8537463 628..860 99 -> Plus
2L 8540458..8541439 861..1842 100   Plus

FI04485.hyp Sequence

Translation from 367 to 1638

> FI04485.hyp
MCRCCQNCWEDFYWNCFEERFCYDESIANYNPEEDEDYLASRKNGQIIGR
IQPTSVDNNNSLTVPQPICDQPQMRQGNSSLGLSLMSAKIHEEDYRRETQ
INVPNLGPEILAVFANSQIFQDHQPTKLNRISTKTYLAGIHSPNREMPTT
PRLSDQDRLLRRLEGDATDARTGSTEKRITFTLAPSSAECSPSGSQTTLT
PKKFEAIAEEEKEDDKADEEEEIMEEVVLRPRLIDRHPHLLANPSGLTTT
PKRILRSAKSVPHMNVRSSASETDIFSISGTMTGSSQISMTPEVPSISFS
NLPKNYEDTPTIEKYRVSQSLYSIQTANAARATQDDYSMPRYFRRSAMLL
TQSSEVLPGASSLASMSPSMASSSASPGSSKDELRRPEKEKSKRLQMLRG
NLPPLLIHSVSFKRNRDEGKQVD*

FI04485.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:43:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG17834-PE 423 CG17834-PE 1..423 1..423 2186 100 Plus
CG17834-PC 423 CG17834-PC 1..423 1..423 2186 100 Plus
CG17834-PA 423 CG17834-PA 1..423 1..423 2186 100 Plus
CG17834-PF 208 CG17834-PF 1..166 1..166 899 99.4 Plus
CG17834-PD 208 CG17834-PD 1..166 1..166 899 99.4 Plus

FI04485.pep Sequence

Translation from 367 to 1638

> FI04485.pep
MCRCCQNCWEDFYWNCFEERFCYDESIANYNPEEDEDYLASRKNGQIIGR
IQPTSVDNNNSLTVPQPICDQPQMRQGNSSLGLSLMSAKIHEEDYRRETQ
INVPNLGPEILAVFANSQIFQDHQPTKLNRISTKTYLAGIHSPNREMPTT
PRLSDQDRLLRRLEGDATDARTGSTEKRITFTLAPSSAECSPSGSQTTLT
PKKFEAIAEEEKEDDKADEEEEIMEEVVLRPRLIDRHPHLLANPSGLTTT
PKRILRSAKSVPHMNVRSSASETDIFSISGTMTGSSQISMTPEVPSISFS
NLPKNYEDTPTIEKYRVSQSLYSIQTANAARATQDDYSMPRYFRRSAMLL
TQSSEVLPGASSLASMSPSMASSSASPGSSKDELRRPEKEKSKRLQMLRG
NLPPLLIHSVSFKRNRDEGKQVD*

FI04485.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15535-PA 422 GF15535-PA 1..422 1..423 1939 93.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:30:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25295-PA 424 GG25295-PA 1..424 1..423 2223 98.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:30:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10961-PA 405 GH10961-PA 1..405 1..423 1601 77.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG17834-PE 423 CG17834-PE 1..423 1..423 2186 100 Plus
CG17834-PC 423 CG17834-PC 1..423 1..423 2186 100 Plus
CG17834-PA 423 CG17834-PA 1..423 1..423 2186 100 Plus
CG17834-PF 208 CG17834-PF 1..166 1..166 899 99.4 Plus
CG17834-PD 208 CG17834-PD 1..166 1..166 899 99.4 Plus
CG17834-PB 208 CG17834-PB 1..166 1..166 899 99.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:30:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10487-PA 280 GI10487-PA 30..280 163..423 757 70.3 Plus
Dmoj\GI10476-PA 196 GI10476-PA 1..156 1..166 722 78.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26135-PA 414 GL26135-PA 1..414 1..423 1821 87.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14689-PA 418 GA14689-PA 1..418 1..423 1920 90.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17066-PA 425 GM17066-PA 1..425 1..423 2234 98.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23555-PA 425 GD23555-PA 1..425 1..423 2233 98.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:30:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21692-PA 413 GJ21692-PA 1..413 1..423 1568 76.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18749-PA 407 GK18749-PA 1..407 1..423 1684 79.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18786-PA 426 GE18786-PA 1..426 1..423 2224 97.9 Plus