Clone FI04491 Report

Search the DGRC for FI04491

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:91
Vector:pFlc-1
Associated Gene/TranscriptCG10933-RA
Protein status:FI04491.pep: gold
Sequenced Size:1414

Clone Sequence Records

FI04491.complete Sequence

1414 bp assembled on 2009-06-24

GenBank Submission: BT088857.1

> FI04491.complete
AACACCAGAGAATATTGAGAAGAAGAAGAGCGTTGTGTCGGATCTAAACA
ATAAAGAAATTAAGCAATTAGCCGAAATTTTGTTGTTTTTCGGTTGAAGG
GGGTTTAATTCCGAGTGGGGGGAAGAGATGGCATTTCTTTGCCCCGTGCG
CATGAGGCGCGACAAGAAGAAAGCTACAAATGCCAGCATTGAGAGGGACT
TACCAGCTGTGGGTGTATTGGGCATGGGCCGCATAACTGGTTCCTCCAGC
ATTGAAACACTTGTAAGAGTGGGCATTGAAAAGGAACACGGTCTAAGTCC
TGATTCCAAGATGGTTGTGCTGCACGACTTTACTCCTTGCGTGGATGATG
AACTAGAGGTGAAGCGTGGACAGCTGGTTAATATCTTGTACAGAGAGAAC
GATTGGGTCTACGTGATTGGTCAGGACTCTAGGCAGGAGGGTTTCATACC
CTTCTCTTATTGTGCTCCCTGCAACACGCAACTGGCGGATTTGGCTGTTA
AGAAGAAACTGCCAAGGGAACAGTGTCCAGAGCAGCCGATCGAAGAGAAT
ATACCACTTTTGGGCACGGATAACAAGCTGGATGTTCTTTGCGATGAAAC
CTTGAATCCTGGCTCCGCCAACAGCATAGAGAACACCCTGCTGGTGGAGC
CAGAGTGTACTCCTTTCGTGAAGGAACCCTCCGGGCGCTGTATCGTCTTG
TACACCTTTATAGCCAGGGACGAGAATGATTTGTCTGTGGAACGGGGTGA
ATTTGTTACCGTGCTAAATCGCGAGGATCCCGATTGGTTTTGGATAATGC
GCAGTGATGGCCAGGAAGGATTTGTGCCAGCCAGCTTTATTTATCCTGCA
GACAGTGTACGAGTTTTGCAGCAACAGAAAGCCACTTTAAATGCCATGGA
GACCATTTTGCAGCAGGGTCAACAAGGTCAGCAGAGCCAGCAACAGCAGC
AGCCTCAATTGGGCTTGGGAACAGATGATCTACGCTACCATGGCACGGAG
CTGGTGATGCTGTATGATTACAAAGCGCAAGCTCCAGACGATCTGTACCT
TTCTGTGCGGAGAGGAGATTGGATTTACGCAGACTTAACCAATCAGACTG
TTGATGGCTGGCTTTGGGCTTATGCTCCGAAAACCCGCAAATATGGATTC
ATCCCGAAAGCCTATGCCCGACCACCCGCGATGACCAGCCTTTAAGAAAT
AGATTCAATACCATAATCGTTTTAATTATCACTTCGACTAACACTAAAGC
GTAATATTCGTAAGTCTTCCAAACACAGTCGAATTGCATTTCGAAAAGCG
TTTCTTTGTGGCTTGGATATTTTTATCTTGAACACTAAATTAATTTTCAA
CTCATAAATGCCATTTTCATTGAGTAATAAATTGTGCCTTAGATTTATAA
AAAAAAAAAAAAAA

FI04491.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10933-RA 1398 CG10933-RA 1..1398 1..1398 6990 100 Plus
CG10933.a 1447 CG10933.a 357..1447 308..1398 5455 100 Plus
CG10933.a 1447 CG10933.a 1..173 1..173 865 100 Plus
CG10933.a 1447 CG10933.a 236..359 174..297 620 100 Plus
CG10934-RA 1043 CG10934-RA 975..1043 1..69 345 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 13611095..13612197 296..1398 5455 99.6 Plus
chr2R 21145070 chr2R 13610453..13610625 1..173 850 99.4 Plus
chr2R 21145070 chr2R 13610911..13611036 172..297 630 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:13:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17723954..17725056 296..1398 5515 100 Plus
2R 25286936 2R 17723313..17723485 1..173 865 100 Plus
2R 25286936 2R 17723770..17723895 172..297 630 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 17725153..17726255 296..1398 5515 100 Plus
2R 25260384 2R 17724512..17724684 1..173 865 100 Plus
2R 25260384 2R 17724969..17725094 172..297 630 100 Plus
Blast to na_te.dros performed 2019-03-15 15:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6739..6822 868..957 129 65.6 Plus
roo 9092 roo DM_ROO 9092bp 1069..1116 910..957 123 72.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6814..6859 910..958 121 75.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2396 910..958 119 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2330..2381 910..958 117 75 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 145..194 904..953 115 70 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9175..9224 904..953 115 70 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2789..2836 910..957 114 70.8 Plus
roo 9092 roo DM_ROO 9092bp 1103..1150 911..958 114 70.8 Plus
invader5 4038 invader5 INVADER5 4038bp 1355..1417 1338..1394 113 68.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6768 905..957 112 67.9 Plus

FI04491.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:08:43 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 13610453..13610625 1..173 99 -> Plus
chr2R 13610913..13611036 174..297 100 -> Plus
chr2R 13611097..13612197 298..1398 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:11:01 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
CG10933-RA 1..1068 128..1195 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:48:40 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
CG10933-RA 1..1068 128..1195 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:04:06 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
CG10933-RA 1..1068 128..1195 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:28:23 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
CG10933-RA 1..1068 128..1195 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-25 12:21:40 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
CG10933-RA 1..1195 1..1195 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:48:39 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
CG10933-RA 1..1398 1..1398 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:04:06 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
CG10933-RA 5..1402 1..1398 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:28:23 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
CG10933-RA 5..1402 1..1398 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:08:43 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17723313..17723485 1..173 100 -> Plus
2R 17723772..17723895 174..297 100 -> Plus
2R 17723956..17725056 298..1398 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:08:43 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17723313..17723485 1..173 100 -> Plus
2R 17723772..17723895 174..297 100 -> Plus
2R 17723956..17725056 298..1398 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:08:43 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17723313..17723485 1..173 100 -> Plus
2R 17723772..17723895 174..297 100 -> Plus
2R 17723956..17725056 298..1398 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:04:06 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13610818..13610990 1..173 100 -> Plus
arm_2R 13611277..13611400 174..297 100 -> Plus
arm_2R 13611461..13612561 298..1398 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:24:17 Download gff for FI04491.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17725155..17726255 298..1398 100   Plus
2R 17724512..17724684 1..173 100 -> Plus
2R 17724971..17725094 174..297 100 -> Plus

FI04491.hyp Sequence

Translation from 127 to 1194

> FI04491.hyp
MAFLCPVRMRRDKKKATNASIERDLPAVGVLGMGRITGSSSIETLVRVGI
EKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQLVNILYRENDWVYVIGQD
SRQEGFIPFSYCAPCNTQLADLAVKKKLPREQCPEQPIEENIPLLGTDNK
LDVLCDETLNPGSANSIENTLLVEPECTPFVKEPSGRCIVLYTFIARDEN
DLSVERGEFVTVLNREDPDWFWIMRSDGQEGFVPASFIYPADSVRVLQQQ
KATLNAMETILQQGQQGQQSQQQQQPQLGLGTDDLRYHGTELVMLYDYKA
QAPDDLYLSVRRGDWIYADLTNQTVDGWLWAYAPKTRKYGFIPKAYARPP
AMTSL*

FI04491.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:44:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG10933-PA 355 CG10933-PA 1..355 1..355 1880 100 Plus

FI04491.pep Sequence

Translation from 127 to 1194

> FI04491.pep
MAFLCPVRMRRDKKKATNASIERDLPAVGVLGMGRITGSSSIETLVRVGI
EKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQLVNILYRENDWVYVIGQD
SRQEGFIPFSYCAPCNTQLADLAVKKKLPREQCPEQPIEENIPLLGTDNK
LDVLCDETLNPGSANSIENTLLVEPECTPFVKEPSGRCIVLYTFIARDEN
DLSVERGEFVTVLNREDPDWFWIMRSDGQEGFVPASFIYPADSVRVLQQQ
KATLNAMETILQQGQQGQQSQQQQQPQLGLGTDDLRYHGTELVMLYDYKA
QAPDDLYLSVRRGDWIYADLTNQTVDGWLWAYAPKTRKYGFIPKAYARPP
AMTSL*

FI04491.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:13:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11665-PA 353 GF11665-PA 1..353 1..355 1722 94.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21812-PA 355 GG21812-PA 1..355 1..355 1880 98.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:13:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21638-PA 358 GH21638-PA 1..358 1..355 1598 88.7 Plus
Dgri\GH12938-PA 360 GH12938-PA 1..360 1..355 1596 87.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dlish-PA 355 CG10933-PA 1..355 1..355 1880 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20091-PA 373 GI20091-PA 1..373 1..355 1554 83.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:13:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16792-PA 371 GL16792-PA 1..371 1..355 1618 86.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:13:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24296-PA 371 GA24296-PA 1..371 1..355 1622 86.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21814-PA 355 GM21814-PA 1..355 1..355 1887 99.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11305-PA 455 GD11305-PA 1..246 1..246 1314 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19858-PA 380 GJ19858-PA 1..380 1..355 1533 82.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:13:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23256-PA 369 GK23256-PA 1..369 1..355 1387 75.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:13:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11889-PA 355 GE11889-PA 1..355 1..355 1863 97.7 Plus