Clone FI04493 Report

Search the DGRC for FI04493

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:44
Well:93
Vector:pFlc-1
Associated Gene/Transcriptscyl-RA
Protein status:FI04493.pep: gold
Sequenced Size:2209

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
scyl 2008-12-18 5.12 accounting

Clone Sequence Records

FI04493.complete Sequence

2209 bp assembled on 2008-11-07

GenBank Submission: BT057991.1

> FI04493.complete
GATAATAGCTTCGAAAAAAACACTGAACACAGTACACAAGAAAACAGACT
CTCGCAGCCAGAAAATCAAATGAAGCAGCAGCAGCAAAAACGTGCATAGC
CAGACTTTTTCCACTGCTAAAATTTTACAAATCCAAAAAGTTCAATCATT
CAACATTGTTTCACGAAGAATTCTATGCTACTGACGTTATATTTTTAAAC
TAAACTAAACATTTAAATTTGCCATCAAACAAATGCAACGGACCAACGCC
ATTTAAGTGATACAACAAAACAAATAAAAGTTTAAACAACATAAGTGCTG
TGATTTCCACTACAAAACAACAACCAACCAACCAACCAACCAACCAACAA
CAACAACAACAAATGTTAATTTAAACTGCAACCAGAACGTAAAGAGGAAG
AATTTAAGCAATCAGCAAGAAAACAAACAGCAAATTGTGATAAATTAAAT
AAGCTTAATTAAATTGTAAAAGTGATATACAAAGAAGGCGACAAAAGCCG
TCGGAAAATTGCGAGCGAGCGAGCGAACGAACGACTTTCGATTCGATTCG
ACTTTCCAAGCCAACAAAACACAGAAAAACCGATGAAAATGGATGTTATT
GCTCGGGAACAAATCATCTACGGTAGCCTGCAGGGATCAAACAAAAATAA
AGATTGGACCAGCAGACTGCCACCGCCGTCGGCATACACTCTGGACCTGA
TGTCCAAGAAGGCCAAGACGACAACCGGGGGCAGCAGCAATGGCAGCAAT
GCTACCGCCACATCCACAACCACATCCACATCCAGCAGTATTAAGCACAA
GCAGCCGGCGGGCAGCAGCAACAACAATGTTGGCCAAAGTCAGAGCAAGA
AGACAAAGCCCAGCGGCAGCTATAATAGCAATAGCAACTACTACTACTAC
GCTGCTGACGAGGAGGAGGGCGGTAGCGCTGACTATGCACTGAGCAACTA
CGATAAGAAGGCTGTCGAGGAGCTGTCCCTGCGATTGCTCGACGAACTGA
GGGCGGCCAAGTCGCGTCATTTGACCTGTACGGAAGTGTCGCTACCCTGT
GATCTCACGCCGAGCGTGGCCCGGGAAATAATCCGCGTGTCGGAGAAGGA
GCCCCGCGGCATACGCGGCTGCACCATCTACATTGAGTTCGAGGATGAGC
CGAAGAATTCGCGTCGCATTGCCTCGATCAAGGTCGATTCGGATACGGTG
TCCACATTCGAAGTGTATCTGACCCTCAGGCAGGATCATCGCGGCTGGAC
GTCGCTGTTGCCGCAGTTCATGAAGAGTTTGGCCCGCACGATCACCATCA
GTCCGGAGTATACGATCACCAAGAATAAGCTATATTCCGCTGATGGTTTG
GGTGCACGCAGGAGCTATAGCTTCGGCAGCCACGCCCATAGACCCAGTGC
GGCCATCGCCACGCCCACCAACTAATGGTGATCAGCTTGATCTGTCAGAT
ATGCATATGTTCGTATATGTGTCTGCGCGAAACAAACAAAACACCACCCC
TGTGATGATCGAGAGCAGTAGTTTGTTGCAGTTTGAAGTGCAACAACGAA
GCAAGTATTCGAAGCCACCACACCTACACCACACACACACACACACAAAC
ACCTTTAATACACACATACATACACACAAACACACACACACACACACACA
TACACATTAGGTTACGCCAACCACACTCTCATACTAATACTATATATGGG
ACCGTAAGGCCCGATTTTTGTAATTGTGACTCTCACCACCATTTTACTTA
GATGCGTAGTGCTATAACAAATAACTAGAGTTTTAAGTTGTTTCTCCTTT
TTCAAAAACGCAAAAGCAAGAAAAACAAAACAAGGCGACAAGAGCGGAAG
AAAAGTAAAGAAAAAAACCAACATGAAATTCAAAGACGACAGCCCCACGA
ATCAATCCCCAGAATCATATTTCTGGGGCATTCGCTTTGGGGCTCGCCGG
TCGACAACTCATGAATATGTGATACTGTTTAAGATGCTAAGAGTTTTTTG
CCGGATGCACCAAAGTCCGGCAAAAGACGTTGATAAAATTACACATAACA
CACAACACAAGAAAATACAAACACACACACACACAAACACGCAAACACCC
CATACACAACAAAAACCACAATACAAAAGAACAGATTTTTTTTTAAAAAT
TGTATGCTATATAGTAATAAACAAAGAAACCAACAAAACAAGCAAAAAAA
AAAAAAAAA

FI04493.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:13:42
Subject Length Description Subject Range Query Range Score Percent Strand
scyl-RA 2615 scyl-RA 62..2256 2..2196 10900 99.7 Plus
scyl.a 3266 scyl.a 62..2256 2..2196 10900 99.7 Plus
scyl-RB 3213 scyl-RB 1393..2938 651..2196 7685 99.8 Plus
scyl-RB 3213 scyl-RB 2..652 2..652 3225 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11244561..11246096 651..2191 7380 99.2 Plus
chr3L 24539361 chr3L 11243170..11243820 2..652 3210 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:13:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:57:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11253701..11255246 651..2196 7685 99.8 Plus
3L 28110227 3L 11252310..11252960 2..652 3225 99.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11246801..11248346 651..2196 7685 99.8 Plus
3L 28103327 3L 11245410..11246060 2..652 3225 99.6 Plus
Blast to na_te.dros performed 2019-03-16 09:57:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2472 730..900 207 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2388..2540 732..896 184 61.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2448 742..900 179 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6905 731..891 174 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6913 731..907 169 62 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6868 747..900 143 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6845 812..897 131 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6809 812..888 126 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2409 794..891 116 59.2 Plus

FI04493.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:57:57 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11243169..11243820 1..652 95 -> Plus
chr3L 11244563..11245479 653..1569 99 == Plus
chr3L 11245565..11245948 1657..2040 100 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:48:29 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 1..843 583..1425 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:20:05 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 1..843 583..1425 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:08:02 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 1..843 583..1425 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:50:24 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 1..843 583..1425 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 08:01:04 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 2..2193 2..2193 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:20:05 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 1..2192 2..2193 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:02 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 3..2195 1..2193 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-11-07 17:44:27 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 2..2193 2..2193 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:50:24 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 3..2195 1..2193 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:57:57 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11252309..11252960 1..652 99 -> Plus
3L 11253703..11255243 653..2193 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:57:57 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11252309..11252960 1..652 99 -> Plus
3L 11253703..11255243 653..2193 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:57:57 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11252309..11252960 1..652 99 -> Plus
3L 11253703..11255243 653..2193 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:02 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11245409..11246060 1..652 99 -> Plus
arm_3L 11246803..11248343 653..2193 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:51:28 Download gff for FI04493.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11245409..11246060 1..652 99 -> Plus
3L 11246803..11248343 653..2193 99   Plus

FI04493.pep Sequence

Translation from 582 to 1424

> FI04493.pep
MKMDVIAREQIIYGSLQGSNKNKDWTSRLPPPSAYTLDLMSKKAKTTTGG
SSNGSNATATSTTTSTSSSIKHKQPAGSSNNNVGQSQSKKTKPSGSYNSN
SNYYYYAADEEEGGSADYALSNYDKKAVEELSLRLLDELRAAKSRHLTCT
EVSLPCDLTPSVAREIIRVSEKEPRGIRGCTIYIEFEDEPKNSRRIASIK
VDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITISPEYTITKNKL
YSADGLGARRSYSFGSHAHRPSAAIATPTN*

FI04493.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:36:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25255-PA 274 GF25255-PA 12..274 19..280 892 69.9 Plus
Dana\GF25267-PA 305 GF25267-PA 169..305 120..254 469 65 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:36:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15494-PA 276 GG15494-PA 1..276 3..280 1232 94.6 Plus
Dere\GG15507-PA 299 GG15507-PA 158..299 114..254 446 60.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:36:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16643-PA 280 GH16643-PA 1..279 3..279 685 58.7 Plus
Dgri\GH16655-PA 273 GH16655-PA 133..273 119..254 453 63.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
scyl-PC 280 CG7590-PC 1..280 1..280 1434 100 Plus
scyl-PA 280 CG7590-PA 1..280 1..280 1434 100 Plus
chrb-PE 233 CG7533-PE 26..233 49..254 419 45.6 Plus
chrb-PC 299 CG7533-PC 92..299 49..254 419 45.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:36:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11599-PA 273 GI11599-PA 1..246 3..258 654 57.9 Plus
Dmoj\GI11614-PA 304 GI11614-PA 163..297 120..252 439 62.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22775-PA 260 GL22775-PA 1..259 3..279 796 61.4 Plus
Dper\GL22796-PA 289 GL22796-PA 148..289 114..254 463 61.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20462-PA 260 GA20462-PA 1..259 3..279 796 61.4 Plus
Dpse\GA20420-PA 289 GA20420-PA 148..289 114..254 463 61.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25265-PA 278 GM25265-PA 1..278 3..280 1446 98.6 Plus
Dsec\GM25275-PA 299 GM25275-PA 158..299 114..254 443 60.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14299-PA 481 GD14299-PA 1..211 3..213 1096 98.6 Plus
Dsim\GD14310-PA 299 GD14310-PA 158..299 114..254 443 60.1 Plus
Dsim\GD14372-PA 51 GD14372-PA 1..51 230..280 257 98 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11278-PA 284 GJ11278-PA 1..283 3..279 700 59 Plus
Dvir\GJ11294-PA 295 GJ11294-PA 125..288 82..252 461 54.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17162-PA 268 GK17162-PA 3..253 6..266 720 63.4 Plus
Dwil\GK17172-PA 323 GK17172-PA 182..323 114..254 479 65.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21804-PA 291 GE21804-PA 1..291 3..280 1378 92.5 Plus
Dyak\GE21815-PA 299 GE21815-PA 158..299 114..254 442 60.1 Plus

FI04493.hyp Sequence

Translation from 582 to 1424

> FI04493.hyp
MKMDVIAREQIIYGSLQGSNKNKDWTSRLPPPSAYTLDLMSKKAKTTTGG
SSNGSNATATSTTTSTSSSIKHKQPAGSSNNNVGQSQSKKTKPSGSYNSN
SNYYYYAADEEEGGSADYALSNYDKKAVEELSLRLLDELRAAKSRHLTCT
EVSLPCDLTPSVAREIIRVSEKEPRGIRGCTIYIEFEDEPKNSRRIASIK
VDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITISPEYTITKNKL
YSADGLGARRSYSFGSHAHRPSAAIATPTN*

FI04493.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
scyl-PC 280 CG7590-PC 1..280 1..280 1434 100 Plus
scyl-PA 280 CG7590-PA 1..280 1..280 1434 100 Plus
chrb-PE 233 CG7533-PE 26..233 49..254 419 45.6 Plus
chrb-PC 299 CG7533-PC 92..299 49..254 419 45.6 Plus