BDGP Sequence Production Resources |
Search the DGRC for FI04555
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 45 |
Well: | 55 |
Vector: | pFlc-1 |
Associated Gene/Transcript | TAF1B-RA |
Protein status: | FI04555.pep: gold |
Sequenced Size: | 2947 |
Gene | Date | Evidence |
---|---|---|
CG6241 | 2008-12-18 | 5.12 accounting |
2947 bp assembled on 2008-09-25
GenBank Submission: BT057993.1
> FI04555.complete ATAGATCATTCCCCACCACTATCACATGCACGATTTGTGTACAACCGCGA GTTTGATTAATAATATAATTTAAATCTGATACCGTCAAGAGAAAGTCCCA AAAATGGAGGAAGTTCTCGAGACGATGCAGCTGGAGAACATGCACTGCGA TGTGTGCGAGGGTACCACCTTCCAGGAGCGCGAGGGATTCTACTACTGCG TAGAGTGTGGCACACAGAAGGATCAGATTCGTGCAGTGGACATTACCGCC GAGGATAACTTTGATGACACGGCAGCAGGCCGATATACAGCCAGGACGAT CCGACAGAAGAAGGATACGGAGAAGGAGGATGAGGACGATATCACCTCGT GGGAATTCTACAACTACGTGCTGCGCGGCTTCCTCCAGGAGCTGCTCAAC ATGGGCGCCAAGCCGGAGCTCAAACTGATGACCCTGCAAGTGTGGGCGGC TTACTTGGACAGCATGGAGGTGGCCTTCAGCAAGAGCAACAAGACGGGAC TGCCTAAACTGAATGTGCGGGCGCTGCCCATAGATGCCCGCATCATCTAC AACCATAAGACATTCAAGAAAGGCAAAAAGGGCAAGAAGAGCACTCTAAC GGGTGACCCAAATGACGAGCGCGCCAAGTTCAGATTGTGGAACAGAACTA AGCGCAATCTAGACGCCTCCGGCTACCGCTCGCACGGAGGAGCTTCAGAG TCCGAAGGGGAGCAGAGTCTCCACCTGCAATGGTCAATGCGTGCACGCAA GTCCTTGAAGCGCCATATGCCGCTGAAGCACCTGGACAAGCATAGCCGCG ACAGCAAGGGTAGTATGTCGTGCCACAGCTTGAGACCGAGGGTCAAGCAG CTCCACAATTTTGATCGTAACATCTACTGCCTGAATATTATCAAGTTGTA TGTGGTGCTGGGCATAGCCCTTAATATGGTGGAGGATGATATACAGCTAT CGGACTTGCTGCGCTTCATTGATGAGGAGCACTTGACCAAGCGGTGCATG CTTAACTATCTGCCCGGAAATGTGGCGGCCAAGGGCAAGGCACTGCTCAA AGATATGGAGCTCAGCAAAATGAAAGACAAGGTTACCAACAAGCTTCTGC GTGTAAACATCGCGTGTATGTCACGATTCATAAACTTGTCTGAATATCAA AAACCGAACCTGCACTCCCTAGCGGAGCGATATATTCTGGAGTTGGCACT GCCACCTCGGCTACTGAAGTACGTGAATAGCCTGCTTGACCTGCATCCGC CCACTTTTTTTAACGCCATGACCGTACATCCGTATCCGCGCTATGAGGCC AGGACTATGGCCTACATCCTCTACGCCATGAAGTTGCTCTTCGGCTTGGA CGATCTCAAGGAGCGGAATATATCTGAATCGGCCGCTAAAATCAATGAAA AACTGCTGGAAGTCGGCGGAGATGAGGCTCCCTTGCTTTTTGTTTTTACC GAGTGGATGGAGTTTGTGGAGATGAGGAAAGTGATTGTCTCACATTACAA CCAAAGTTTTGCCCGTCGCTTCGGGGTATCCACCCGGACTGGTTGTCAGG TGGACGACATACTGGCAAAGGAGTGGAAAGAGAAGGAGCAAGGCGAAACC TTTGGCTGGATGCAGGGATCTGCGGCAATGAAGCGTCAGCATGAAAACCT GACACACATTATTGAAACCATGCTGAAGGACCATTTTGGCGAGTCCAGCA AAGAAAGTATGGAGAAGGAACACATTGAATTCCAGCCCAGCTTGACTCCG GCTCACTCCTACTTCAACAGAATCCTACTCCAAGTATCGCGGTCTGATGG TGCAAAAATGAAAATCACAATTCCTGACCACATGAAAGTGGATCACTCGG CCCGCAACCTGGATCCCTTTGTGCTGGAAACGACCGAGCTGTCGCAGTAT TTGTCCCAACATGGCCTTAAACTACGAGTAGAGGAGCTTGCCTGCCAGGA GGACATCCAAAACGTGGGCATATTCCGCCCACTAACAATAATCCGAGGTG ACGGTCGAGAATACCGCGCCAACACTGAAATTAAAACCGAGACGTGGATA AGCGAGCTAAAGCGTAAGGAGAAACGGCCGGACTTTCGGTTCACACAGCC CACTGGAACCTATGGAGCCCGATATTTGAAACGTATAACAATGCGCGACG CAAGGCGTGTGCAACTTGAGATAAATAATCCGTTTTGGGATGTTACCGAA ACGCCCAGCTTTCTTCTCAAACTCAACGATAACGAGATACCACTTGACAG CCTTAGCTCACTGCAAACCTTCGAGGAAGGGACCATGGATCCATTAAACA TCCCTCTAGATCTGCCCCGTCGCAATCTGGAAAAAATTTTGAATCCGGAA GGTTCTGATAGAGCATCAGACCAAGTAGCGAGCGATATCAATGATGAGCC GCCAAGCCCTGAGACGCTGTTATTGCAAGTGTCAAATTTTGATTGCTGGC TTCTACACGGCTATATGAAAAGAATTCGGAGGCATGACAAGCATGAACTG CGTCAGTTGTTCCCCTGTTCCTTCCGTTGGCTCTTGGAGACGTGTGCCAG CACAATAGGCATAGTCTGGGAGGAGCTCTACGAGGAACTGCTCATTGTGG AAGTGATGTACCATCACAGCATCAGGGACTGGAGCAATCATAGGAACTAT CTGTGTATTCAACACAATACTCAAGAGAAGGACATCCGAACCCTCGCCAG GACGTACAAGGAGTTATGGTAGTATATTAGAAGTATTAAAAGTTTTGAAT TAACAAACAACGATGCCATCTGTATAAAATATAATATTCTTCTACGTAGT GCTCTACCTCAAATGATAGATTTTCTTTTTGTGTATATAACCTGTAGAAA TCTTTCAACAGTGATTATGATGCAAATAAATCTGTGTGTTAAGCAGTTAC CAAAGTACAAACATGACACACCCACTACGCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5966337..5968174 | 2929..1092 | 9100 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 5969418..5969948 | 531..1 | 2565 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 5968268..5968710 | 1093..651 | 2215 | 100 | Minus |
chr3R | 27901430 | chr3R | 5969242..5969362 | 652..532 | 605 | 100 | Minus |
chr3R | 27901430 | chr3R | 5969137..5969212 | 652..577 | 380 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10140559..10142400 | 2933..1092 | 9195 | 99.9 | Minus |
3R | 32079331 | 3R | 10143644..10144174 | 531..1 | 2655 | 100 | Minus |
3R | 32079331 | 3R | 10142494..10142936 | 1093..651 | 2215 | 100 | Minus |
3R | 32079331 | 3R | 10143468..10143588 | 652..532 | 605 | 100 | Minus |
3R | 32079331 | 3R | 10143363..10143438 | 652..577 | 380 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9881390..9883231 | 2933..1092 | 9195 | 99.9 | Minus |
3R | 31820162 | 3R | 9884475..9885005 | 531..1 | 2655 | 100 | Minus |
3R | 31820162 | 3R | 9883325..9883767 | 1093..651 | 2215 | 100 | Minus |
3R | 31820162 | 3R | 9884299..9884419 | 652..532 | 605 | 100 | Minus |
3R | 31820162 | 3R | 9884194..9884269 | 652..577 | 380 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 4028..4095 | 2721..2788 | 132 | 69.6 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 6926..7020 | 1470..1381 | 120 | 64.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5966335..5968172 | 1094..2931 | 99 | <- | Minus |
chr3R | 5968268..5968708 | 653..1093 | 100 | <- | Minus |
chr3R | 5969242..5969362 | 532..652 | 100 | <- | Minus |
chr3R | 5969418..5969948 | 1..531 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6241-RA | 1..2619 | 104..2722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6241-RA | 1..2619 | 104..2722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6241-RA | 1..2619 | 104..2722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TAF1B-RA | 1..2619 | 104..2722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6241-RA | 1..2813 | 1..2813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6241-RA | 1..2931 | 1..2931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6241-RA | 11..2941 | 1..2931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6241-RA | 1..2813 | 1..2813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TAF1B-RA | 11..2941 | 1..2931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10143468..10143588 | 532..652 | 100 | <- | Minus |
3R | 10140561..10142398 | 1094..2931 | 99 | <- | Minus |
3R | 10142494..10142934 | 653..1093 | 100 | <- | Minus |
3R | 10143644..10144174 | 1..531 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10143468..10143588 | 532..652 | 100 | <- | Minus |
3R | 10140561..10142398 | 1094..2931 | 99 | <- | Minus |
3R | 10142494..10142934 | 653..1093 | 100 | <- | Minus |
3R | 10143644..10144174 | 1..531 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10143468..10143588 | 532..652 | 100 | <- | Minus |
3R | 10140561..10142398 | 1094..2931 | 99 | <- | Minus |
3R | 10142494..10142934 | 653..1093 | 100 | <- | Minus |
3R | 10143644..10144174 | 1..531 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5969190..5969310 | 532..652 | 100 | <- | Minus |
arm_3R | 5966283..5968120 | 1094..2931 | 99 | <- | Minus |
arm_3R | 5968216..5968656 | 653..1093 | 100 | <- | Minus |
arm_3R | 5969366..5969896 | 1..531 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9881392..9883229 | 1094..2931 | 99 | <- | Minus |
3R | 9883325..9883765 | 653..1093 | 100 | <- | Minus |
3R | 9884299..9884419 | 532..652 | 100 | <- | Minus |
3R | 9884475..9885005 | 1..531 | 100 | Minus |
Translation from 103 to 2721
> FI04555.pep MEEVLETMQLENMHCDVCEGTTFQEREGFYYCVECGTQKDQIRAVDITAE DNFDDTAAGRYTARTIRQKKDTEKEDEDDITSWEFYNYVLRGFLQELLNM GAKPELKLMTLQVWAAYLDSMEVAFSKSNKTGLPKLNVRALPIDARIIYN HKTFKKGKKGKKSTLTGDPNDERAKFRLWNRTKRNLDASGYRSHGGASES EGEQSLHLQWSMRARKSLKRHMPLKHLDKHSRDSKGSMSCHSLRPRVKQL HNFDRNIYCLNIIKLYVVLGIALNMVEDDIQLSDLLRFIDEEHLTKRCML NYLPGNVAAKGKALLKDMELSKMKDKVTNKLLRVNIACMSRFINLSEYQK PNLHSLAERYILELALPPRLLKYVNSLLDLHPPTFFNAMTVHPYPRYEAR TMAYILYAMKLLFGLDDLKERNISESAAKINEKLLEVGGDEAPLLFVFTE WMEFVEMRKVIVSHYNQSFARRFGVSTRTGCQVDDILAKEWKEKEQGETF GWMQGSAAMKRQHENLTHIIETMLKDHFGESSKESMEKEHIEFQPSLTPA HSYFNRILLQVSRSDGAKMKITIPDHMKVDHSARNLDPFVLETTELSQYL SQHGLKLRVEELACQEDIQNVGIFRPLTIIRGDGREYRANTEIKTETWIS ELKRKEKRPDFRFTQPTGTYGARYLKRITMRDARRVQLEINNPFWDVTET PSFLLKLNDNEIPLDSLSSLQTFEEGTMDPLNIPLDLPRRNLEKILNPEG SDRASDQVASDINDEPPSPETLLLQVSNFDCWLLHGYMKRIRRHDKHELR QLFPCSFRWLLETCASTIGIVWEELYEELLIVEVMYHHSIRDWSNHRNYL CIQHNTQEKDIRTLARTYKELW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18134-PA | 862 | GF18134-PA | 1..862 | 1..872 | 2635 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17298-PA | 872 | GG17298-PA | 1..872 | 1..872 | 4177 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13399-PA | 904 | GH13399-PA | 5..904 | 6..872 | 2496 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAF1B-PC | 872 | CG6241-PC | 1..872 | 1..872 | 4596 | 100 | Plus |
TAF1B-PA | 872 | CG6241-PA | 1..872 | 1..872 | 4596 | 100 | Plus |
TAF1B-PB | 661 | CG6241-PB | 1..661 | 212..872 | 3476 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22386-PA | 876 | GI22386-PA | 1..876 | 1..872 | 2600 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23673-PA | 869 | GL23673-PA | 5..869 | 6..872 | 2508 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19467-PA | 869 | GA19467-PA | 5..869 | 6..872 | 2519 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26182-PA | 861 | GM26182-PA | 1..861 | 1..872 | 4309 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20731-PA | 701 | GD20731-PA | 13..701 | 184..872 | 3574 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24419-PA | 878 | GJ24419-PA | 5..878 | 6..872 | 2615 | 56.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11430-PA | 881 | GK11430-PA | 1..881 | 1..872 | 2609 | 56.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24701-PA | 872 | GE24701-PA | 1..872 | 1..872 | 4174 | 89.6 | Plus |
Translation from 103 to 2721
> FI04555.hyp MEEVLETMQLENMHCDVCEGTTFQEREGFYYCVECGTQKDQIRAVDITAE DNFDDTAAGRYTARTIRQKKDTEKEDEDDITSWEFYNYVLRGFLQELLNM GAKPELKLMTLQVWAAYLDSMEVAFSKSNKTGLPKLNVRALPIDARIIYN HKTFKKGKKGKKSTLTGDPNDERAKFRLWNRTKRNLDASGYRSHGGASES EGEQSLHLQWSMRARKSLKRHMPLKHLDKHSRDSKGSMSCHSLRPRVKQL HNFDRNIYCLNIIKLYVVLGIALNMVEDDIQLSDLLRFIDEEHLTKRCML NYLPGNVAAKGKALLKDMELSKMKDKVTNKLLRVNIACMSRFINLSEYQK PNLHSLAERYILELALPPRLLKYVNSLLDLHPPTFFNAMTVHPYPRYEAR TMAYILYAMKLLFGLDDLKERNISESAAKINEKLLEVGGDEAPLLFVFTE WMEFVEMRKVIVSHYNQSFARRFGVSTRTGCQVDDILAKEWKEKEQGETF GWMQGSAAMKRQHENLTHIIETMLKDHFGESSKESMEKEHIEFQPSLTPA HSYFNRILLQVSRSDGAKMKITIPDHMKVDHSARNLDPFVLETTELSQYL SQHGLKLRVEELACQEDIQNVGIFRPLTIIRGDGREYRANTEIKTETWIS ELKRKEKRPDFRFTQPTGTYGARYLKRITMRDARRVQLEINNPFWDVTET PSFLLKLNDNEIPLDSLSSLQTFEEGTMDPLNIPLDLPRRNLEKILNPEG SDRASDQVASDINDEPPSPETLLLQVSNFDCWLLHGYMKRIRRHDKHELR QLFPCSFRWLLETCASTIGIVWEELYEELLIVEVMYHHSIRDWSNHRNYL CIQHNTQEKDIRTLARTYKELW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAF1B-PC | 872 | CG6241-PC | 1..872 | 1..872 | 4596 | 100 | Plus |
TAF1B-PA | 872 | CG6241-PA | 1..872 | 1..872 | 4596 | 100 | Plus |
TAF1B-PB | 661 | CG6241-PB | 1..661 | 212..872 | 3476 | 100 | Plus |