Clone FI04747 Report

Search the DGRC for FI04747

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:47
Well:47
Vector:pFlc-1
Associated Gene/Transcriptspi-RA
Protein status:FI04747.pep: gold
Sequenced Size:1481

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
spi 2008-12-18 5.12 accounting

Clone Sequence Records

FI04747.complete Sequence

1481 bp assembled on 2008-09-15

GenBank Submission: BT044503.1

> FI04747.complete
GATCTCCCTCCAGCTAAAGTCTGGCAACACTTGTTCATTTAAGACGCGAC
ACAACGAATTGTACTCTTTCAGTTTTTCAAAAAGAAAATGGCATGAAAAC
AGGCCAAAAAAGTGCGACAAACGAAGAGCTAAATCCCAAAATACACACAT
CACCCCTAACTCAACGTTTACGTTCCACCAGCAGCATACCTATGTAGAGA
AACCCGATTCCAAAGAGATTTGACGACGCCCTAGCAGCGGACAACGAATA
TTCTAATTTATTTATGTGATAGTCACTAGTTTTAATATTCTTAAGCTTTT
AAACAACCAAACGTTGCACGCCAAAAAACGAACAAGCCGATACGCTACGC
TAAAAAGCTACAAATTGTAATGCATTCCACAATGAGTGTACAACATGGGC
TGGTTGCCCTGGTACTGATCGGCTGTCTGGCACATCCGTGGCACGTCGAG
GCCTGCTCCAGCCGTACGGTGCCCAAGCCGCGCTCTTCGATCTCCTCGTC
CATGTCCGGCACGGCATTGCCGCCGACCCAGGCTCCAGTCACTAGTAGCA
CCACAATGCGCACCACCACGACGACCACGCCCAGGCCCAATATTACATTC
CCCACATACAAATGTCCGGAAACCTTCGATGCCTGGTACTGTTTGAACGA
TGCCCATTGCTTTGCGGTGAAGATAGCCGATCTACCGGTTTACAGCTGCG
AGTGCGCGATTGGCTTTATGGGACAGCGATGCGAATACAAGGAGATCGAC
AATACTTACCTGCCCAAGAGGCCGCGTCCGATGTTGGAGAAGGCGAGCAT
TGCCAGTGGAGCCATGTGTGCCCTGGTATTTATGCTGTTTGTCTGCCTGG
CCTTCTATTTGCGCTTCGAGCAGCGGGCTGCCAAGAAGGCCTACGAACTG
GAGCAGGAACTGCAGCAGGAATACGACGATGACGACGGCCAGTGCGAGTG
CTGCCGCAACCGGTGCTGTCCAGATGGCCAGGAGCCAGTCATTCTGGAGC
GCAAGCTACCCTACCACATGCGGCTGGAGCACGCGCTAATGTCCTTCGCC
ATTCGACGCAGCAACAAGCTGTGAGCGGAGCGAACTATGGAAACTATGAA
AAGATATAGAAAGTCGAATTTCGAATATGCCTTGCCCAACACACAATTCT
TAACTGGGCTTTAGTCGATAGCTGATAACTCCTATTTACCTACCGCATGC
TAAAGATCTGTTCACCCGATTCTATATAGAGATCTTGACTTTCTCTTACC
AAAAGTTACCCAGAAAGGGGGTTTTAAAGCCAGACAGCCTTGTATTACCC
AATTGACTATGAATTTTAATACCTAACGCTAGCTATTTATTATTACTGCT
AACTGATATACGTATCACACACACAACGCGACACACGCGCCAAGTATTAT
TTATTGCGAGAGATTTAAGAAGAAATGATATGGATTTTCTAAATAAACAT
ACGAAACTGCACCATGCAAAAAAAAAAAAAA

FI04747.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
spi-RF 1582 spi-RF 29..1498 2..1471 7350 100 Plus
spi.c 1734 spi.c 348..1678 141..1471 6655 100 Plus
spi-RA 1778 spi-RA 364..1694 141..1471 6655 100 Plus
spi.c 1734 spi.c 1..139 2..140 695 100 Plus
spi-RA 1778 spi-RA 29..167 2..140 695 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:52:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19566440..19567766 1467..141 6620 99.9 Minus
chr2L 23010047 chr2L 19575721..19575859 140..2 695 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:13:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19567896..19569226 1471..141 6655 100 Minus
2L 23513712 2L 19577186..19577324 140..2 695 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19567896..19569226 1471..141 6655 100 Minus
2L 23513712 2L 19577186..19577324 140..2 695 100 Minus
Blast to na_te.dros performed 2019-03-15 23:52:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmir\worf 4174 Dmir\worf WORF 4174bp Derived from AY144572. 760..835 970..893 124 65.8 Minus
Dmir\worf 4174 Dmir\worf WORF 4174bp Derived from AY144572. 820..859 932..893 119 77.5 Minus

FI04747.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:53:33 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19566440..19567766 141..1467 99 <- Minus
chr2L 19575721..19575859 1..140 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:48:59 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RA 1..705 370..1074 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:01:25 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RA 1..705 370..1074 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:31:45 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RA 1..705 370..1074 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:50:20 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RA 1..705 370..1074 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:19:48 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RF 1..1466 2..1467 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:01:25 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RF 1..1466 2..1467 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:31:45 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RF 1..1457 11..1467 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:13:40 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RF 1..1466 2..1467 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:50:20 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
spi-RF 1..1457 11..1467 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:53:33 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19567900..19569226 141..1467 100 <- Minus
2L 19577186..19577324 1..140 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:53:33 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19567900..19569226 141..1467 100 <- Minus
2L 19577186..19577324 1..140 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:53:33 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19567900..19569226 141..1467 100 <- Minus
2L 19577186..19577324 1..140 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:31:45 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19567900..19569226 141..1467 100 <- Minus
arm_2L 19577186..19577324 1..140 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:28:50 Download gff for FI04747.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19567900..19569226 141..1467 100 <- Minus
2L 19577186..19577324 1..140 99   Minus

FI04747.pep Sequence

Translation from 369 to 1073

> FI04747.pep
MHSTMSVQHGLVALVLIGCLAHPWHVEACSSRTVPKPRSSISSSMSGTAL
PPTQAPVTSSTTMRTTTTTTPRPNITFPTYKCPETFDAWYCLNDAHCFAV
KIADLPVYSCECAIGFMGQRCEYKEIDNTYLPKRPRPMLEKASIASGAMC
ALVFMLFVCLAFYLRFEQRAAKKAYELEQELQQEYDDDDGQCECCRNRCC
PDGQEPVILERKLPYHMRLEHALMSFAIRRSNKL*

FI04747.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15623-PA 225 GF15623-PA 2..225 11..234 922 85.3 Plus
Dana\GF23898-PA 209 GF23898-PA 1..179 5..207 398 43.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21620-PA 230 GG21620-PA 1..230 5..234 1209 97.4 Plus
Dere\GG15794-PA 217 GG15794-PA 8..156 11..176 408 51.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13498-PA 245 GH13498-PA 1..245 5..234 820 72.6 Plus
Dgri\GH13960-PA 187 GH13960-PA 11..187 71..234 734 80.2 Plus
Dgri\GH15347-PA 227 GH15347-PA 29..167 27..176 408 52.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
spi-PF 234 CG10334-PF 1..234 1..234 1269 100 Plus
spi-PG 234 CG10334-PG 1..234 1..234 1269 100 Plus
spi-PA 234 CG10334-PA 1..234 1..234 1269 100 Plus
spi-PB 234 CG10334-PB 1..234 1..234 1269 100 Plus
spi-PE 234 CG10334-PE 1..234 1..234 1269 100 Plus
Krn-PA 217 CG32179-PA 8..156 11..176 404 50.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17249-PA 231 GI17249-PA 10..231 17..234 764 75.2 Plus
Dmoj\GI12950-PA 216 GI12950-PA 12..156 15..175 384 49.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26227-PA 241 GL26227-PA 2..241 1..234 925 78.1 Plus
Dper\GL25227-PA 231 GL25227-PA 11..167 13..173 392 50.3 Plus
Dper\GL25799-PA 316 GL25799-PA 172..313 56..185 148 31 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28085-PA 230 GA28085-PA 7..230 12..234 908 81.4 Plus
Dpse\GA16736-PA 231 GA16736-PA 11..167 13..173 392 52.2 Plus
Dpse\GA25451-PA 316 GA25451-PA 172..313 56..185 149 31 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:39:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16998-PA 230 GM16998-PA 1..230 5..234 1221 98.7 Plus
Dsec\GM24318-PA 217 GM24318-PA 8..156 11..176 403 50.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:39:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21745-PA 230 GD21745-PA 1..230 5..234 1225 99.1 Plus
Dsim\GD12388-PA 217 GD12388-PA 8..156 11..176 403 50.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:39:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18009-PA 233 GJ18009-PA 10..233 17..234 850 79.5 Plus
Dvir\GJ13094-PA 215 GJ13094-PA 21..206 28..231 392 44.4 Plus
Dvir\GJ18124-PA 153 GJ18124-PA 105..149 82..126 154 53.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15227-PA 252 GK15227-PA 1..248 1..232 655 64.4 Plus
Dwil\GK12333-PA 236 GK12333-PA 30..177 27..180 366 49.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12640-PA 230 GE12640-PA 1..230 5..234 1203 97.8 Plus
Dyak\GE22131-PA 217 GE22131-PA 23..156 28..176 412 53.7 Plus

FI04747.hyp Sequence

Translation from 369 to 1073

> FI04747.hyp
MHSTMSVQHGLVALVLIGCLAHPWHVEACSSRTVPKPRSSISSSMSGTAL
PPTQAPVTSSTTMRTTTTTTPRPNITFPTYKCPETFDAWYCLNDAHCFAV
KIADLPVYSCECAIGFMGQRCEYKEIDNTYLPKRPRPMLEKASIASGAMC
ALVFMLFVCLAFYLRFEQRAAKKAYELEQELQQEYDDDDGQCECCRNRCC
PDGQEPVILERKLPYHMRLEHALMSFAIRRSNKL*

FI04747.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:47:00
Subject Length Description Subject Range Query Range Score Percent Strand
spi-PF 234 CG10334-PF 1..234 1..234 1269 100 Plus
spi-PG 234 CG10334-PG 1..234 1..234 1269 100 Plus
spi-PA 234 CG10334-PA 1..234 1..234 1269 100 Plus
spi-PB 234 CG10334-PB 1..234 1..234 1269 100 Plus
spi-PE 234 CG10334-PE 1..234 1..234 1269 100 Plus