BDGP Sequence Production Resources |
Search the DGRC for FI04928
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 49 |
Well: | 28 |
Vector: | pFlc-1 |
Associated Gene/Transcript | gt-RB |
Protein status: | FI04928.pep: gold |
Sequenced Size: | 1792 |
Gene | Date | Evidence |
---|---|---|
gt | 2008-12-18 | 5.12 accounting |
1792 bp assembled on 2008-11-07
GenBank Submission: BT057998.1
> FI04928.complete AGTTTGCGTTCGACATCGTCAGCGTGAAGATATAGCAACATCAGAGCTAG ATCACCAGTCTATATAGCGTCAATCAGTTGGATTAAACCCAGAGACCATA CACCGAACACCATGCTAATGCACGAGAAACTCATGGCCGGGCAGTTCTTC GATCTCAAGACTGATCGCAAGCCCCTGATGCACCACCACCAGTACCAGCA CCACCAGCAGCAACCACTGCACCACTTGCCGCACAGCCAATTGCCGGTTC AGGGATCCTTGGGCCTACCCAAAATGGATCTGTACACGGCCTACGCCTAC CAGCAGCAGTTGCTGGGAGCTGCCCTCAGTCAGCAGCAACAACAGCAACA GCAGCAGCAGCAACATCAGCAGCTGCAGCAGCAGCATACCTCCTCTGCAG AGGTCCTGGATCTTTCCCGTCGATGTGACAGCGTAGAGACACCCAGGAAG ACTCCCTCGCCGTATCAAACAAGCTATAGCTACGGCAGTGGTTCCCCCTC GGCTTCGCCCACCAGCAATCTTCTGTATGCCGCCCAAATGCAACAGCAGC AACATCAGCAGCAACAACAGCAACAGCAGCAGCAGCAACAATTAGCCTCC CTGTATCCCGCTTTTTACTACAGCAACATCAAGCAGGAGCAAGCCACGCC CACTGCTGCTCCGCCCAAGGTTACACCAACCGCTAACCTTCTGCAAACCT TTGCTGCCGCCTCTGCTGCGGCCGCCGCTGCTGCTGCCGCTTCTTCGACC AACTCACCAAGACCCGCCAGCAACGCCAGCACCATGCAGATAGACGTTCT GGAGAATCCCCTGTCACCGGCTGTTGAGGCCACCACGCCAACCACCTCCA GCAGCGGCGAGGCGGGAAAGAACACCCGTCCCTTCAAGGCCTTTCCCCGG GATCCCTTGGTCATAGCTGCCAATTTCGCAGCCACTGATGTCCTTTTGGA CAATCCGCGAGTGGAGCGCTACACGGAATACCGGAAGCGAGTGCTTGAGC AAATCCGCAGCTCCAACGGAGGATCGCGCACCGTAACCAACCCAAAAATG CGAAGGACCAACTCAAGAAGTGGATCCGTCAACGAAGGCAGCTCCTCAAA CAACAACAGCGAAAGCGAGGATCGCGCTGCTGCGGAGGAGTCAAGCGACT GTGACTCCCAGGCGGGCAACTTCGAGAGCAAGTCCGCCACCAGCAGCTCC AGCAACTTGGCTAACGCTACTGCAGCAAACTCGGGCATCAGCTCGGGCAG CCAGGTTAAGGATGCCGCATACTACGAGAGGCGTCGCAAGAACAATGCTG CCGCCAAGAAGTCCCGCGATCGCCGCCGCATCAAGGAGGATGAGATCGCC ATCAGGGCCGCCTATCTGGAACGCCAGAACATCGAGCTCTTGTGCCAGAT CGACGCCCTCAAGGTCCAGCTGGCCGCCTTCACCTCCGCCAAAGTAACCA CCGCCTAAAGGTCCACTCCTCTCTTGATGCGTTGAACGCGAGGATCCGAA TCGTATGTCCAGTTTTTGGGTCAGCTTATCTGTGAATAGTTTAGGGGGCT CAACTTTCTTTTTTTTTTACACGCTCGCATTTAAGTACTTTAAGTCCTTG GAGTATACGTTATATTTGGAAAATGTATTAGCTGTAGTGCATCTCGCAAT CCCACCAGTTAACTATCAATGGAATCATCTATAGTTGTAGAAGTCCCAGC TAGCTATTAATGTTTAACTTATAAGTGAATTTTTTTCATAGCCCTAAGGA ATGAATTTCAATAAATTATCGAAAATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 2320988..2322601 | 1776..163 | 7935 | 99.4 | Minus |
chrX | 22417052 | chrX | 6842929..6843237 | 1219..1527 | 1380 | 96.4 | Plus |
chrX | 22417052 | chrX | 2322676..2322838 | 163..1 | 800 | 99.4 | Minus |
chrX | 22417052 | chrX | 6843240..6843419 | 1580..1776 | 510 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2427111..2428726 | 1778..163 | 8080 | 100 | Minus |
X | 23542271 | X | 6950774..6951082 | 1219..1527 | 1395 | 96.8 | Plus |
X | 23542271 | X | 2428801..2428963 | 163..1 | 815 | 100 | Minus |
X | 23542271 | X | 6951085..6951266 | 1580..1778 | 520 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2435209..2436824 | 1778..163 | 8080 | 100 | Minus |
X | 23527363 | X | 6958872..6959180 | 1219..1527 | 1395 | 96.7 | Plus |
X | 23527363 | X | 2436899..2437061 | 163..1 | 815 | 100 | Minus |
X | 23527363 | X | 6959266..6959364 | 1680..1778 | 405 | 93.9 | Plus |
X | 23527363 | X | 6959183..6959254 | 1580..1651 | 345 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2387 | 741..701 | 115 | 75.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2320988..2322173 | 591..1776 | 96 | == | Minus |
chrX | 2322225..2322377 | 387..539 | 98 | == | Minus |
chrX | 2322434..2322600 | 164..330 | 98 | <- | Minus |
chrX | 2322676..2322838 | 1..163 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gt-RB | 1..1347 | 112..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gt-RB | 1..1347 | 112..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gt-RB | 1..1347 | 112..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gt-RB | 1..1347 | 112..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gt-RB | 1..1776 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gt-RB | 1..1776 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gt-RB | 5..1780 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gt-RB | 5..1780 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2427113..2428725 | 164..1776 | 100 | <- | Minus |
X | 2428801..2428963 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2427113..2428725 | 164..1776 | 100 | <- | Minus |
X | 2428801..2428963 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2427113..2428725 | 164..1776 | 100 | <- | Minus |
X | 2428801..2428963 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2321146..2322758 | 164..1776 | 100 | <- | Minus |
arm_X | 2322834..2322996 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2435211..2436823 | 164..1776 | 100 | <- | Minus |
X | 2436899..2437061 | 1..163 | 100 | Minus |
Translation from 111 to 1457
> FI04928.pep MLMHEKLMAGQFFDLKTDRKPLMHHHQYQHHQQQPLHHLPHSQLPVQGSL GLPKMDLYTAYAYQQQLLGAALSQQQQQQQQQQQHQQLQQQHTSSAEVLD LSRRCDSVETPRKTPSPYQTSYSYGSGSPSASPTSNLLYAAQMQQQQHQQ QQQQQQQQQQLASLYPAFYYSNIKQEQATPTAAPPKVTPTANLLQTFAAA SAAAAAAAAASSTNSPRPASNASTMQIDVLENPLSPAVEATTPTTSSSGE AGKNTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRS SNGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAAEESSDCDSQ AGNFESKSATSSSSNLANATAANSGISSGSQVKDAAYYERRRKNNAAAKK SRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKVQLAAFTSAKVTTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21952-PA | 456 | GF21952-PA | 1..456 | 1..448 | 1251 | 74.4 | Plus |
Dana\GF12658-PA | 197 | GF12658-PA | 121..175 | 383..437 | 170 | 60 | Plus |
Dana\GF24150-PA | 639 | GF24150-PA | 570..623 | 381..434 | 160 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12614-PA | 444 | GG12614-PA | 1..444 | 1..448 | 2247 | 96.7 | Plus |
Dere\GG22289-PA | 192 | GG22289-PA | 116..172 | 383..439 | 168 | 59.6 | Plus |
Dere\GG14935-PA | 598 | GG14935-PA | 529..582 | 381..434 | 157 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17582-PA | 457 | GH17582-PA | 1..457 | 1..447 | 1208 | 68.1 | Plus |
Dgri\GH21058-PA | 187 | GH21058-PA | 112..166 | 383..437 | 170 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gt-PB | 448 | CG7952-PB | 1..448 | 1..448 | 2262 | 100 | Plus |
Smr-PF | 3601 | CG4013-PF | 59..307 | 27..236 | 202 | 30.7 | Plus |
Smr-PE | 3601 | CG4013-PE | 59..307 | 27..236 | 202 | 30.7 | Plus |
Smr-PD | 3601 | CG4013-PD | 59..307 | 27..236 | 202 | 30.7 | Plus |
Smr-PG | 3607 | CG4013-PG | 62..313 | 24..236 | 197 | 29.5 | Plus |
ASPP-PA | 1020 | CG18375-PA | 165..554 | 14..425 | 196 | 25.3 | Plus |
ASPP-PC | 1046 | CG18375-PC | 165..554 | 14..425 | 196 | 25.3 | Plus |
ASPP-PB | 1069 | CG18375-PB | 214..603 | 14..425 | 196 | 25.3 | Plus |
corto-PD | 550 | CG2530-PD | 23..336 | 70..371 | 181 | 24.6 | Plus |
corto-PC | 550 | CG2530-PC | 23..336 | 70..371 | 181 | 24.6 | Plus |
corto-PB | 550 | CG2530-PB | 23..336 | 70..371 | 181 | 24.6 | Plus |
corto-PE | 550 | CG2530-PE | 23..336 | 70..371 | 181 | 24.6 | Plus |
corto-PA | 550 | CG2530-PA | 23..336 | 70..371 | 181 | 24.6 | Plus |
CG32532-PD | 688 | CG32532-PD | 176..328 | 67..253 | 180 | 34.7 | Plus |
sr-PE | 906 | CG7847-PE | 403..548 | 19..169 | 180 | 36.8 | Plus |
sr-PB | 906 | CG7847-PB | 403..548 | 19..169 | 180 | 36.8 | Plus |
wrd-PA | 951 | CG7913-PA | 13..296 | 67..378 | 180 | 26.3 | Plus |
wrd-PB | 984 | CG7913-PB | 13..296 | 67..378 | 180 | 26.3 | Plus |
sr-PA | 1186 | CG7847-PA | 683..828 | 19..169 | 180 | 36.8 | Plus |
sr-PD | 1271 | CG7847-PD | 683..828 | 19..169 | 180 | 36.8 | Plus |
CG17233-PI | 772 | CG17233-PI | 237..433 | 9..212 | 175 | 31.6 | Plus |
CG17233-PD | 772 | CG17233-PD | 237..433 | 9..212 | 175 | 31.6 | Plus |
CG17233-PH | 1006 | CG17233-PH | 506..702 | 9..212 | 175 | 31.6 | Plus |
CG17233-PE | 1007 | CG17233-PE | 507..703 | 9..212 | 175 | 31.6 | Plus |
CG17233-PA | 1173 | CG17233-PA | 237..433 | 9..212 | 175 | 31.6 | Plus |
CG17233-PG | 1443 | CG17233-PG | 507..703 | 9..212 | 175 | 31.6 | Plus |
CG17233-PF | 1464 | CG17233-PF | 528..724 | 9..212 | 175 | 31.6 | Plus |
CG17233-PC | 1465 | CG17233-PC | 529..725 | 9..212 | 175 | 31.6 | Plus |
upSET-PB | 3146 | CG9007-PB | 1484..1903 | 22..375 | 175 | 23.9 | Plus |
upSET-PA | 3146 | CG9007-PA | 1484..1903 | 22..375 | 175 | 23.9 | Plus |
srp-PA | 1264 | CG3992-PA | 407..726 | 25..375 | 172 | 28.4 | Plus |
btd-PA | 644 | CG12653-PA | 23..244 | 25..237 | 169 | 29.7 | Plus |
ab-PE | 899 | CG43860-PE | 575..819 | 1..255 | 169 | 28.9 | Plus |
CG34383-PJ | 1308 | CG34383-PJ | 192..375 | 71..246 | 168 | 31.9 | Plus |
CG34383-PH | 1974 | CG34383-PH | 192..375 | 71..246 | 168 | 31.9 | Plus |
CG34383-PB | 1974 | CG34383-PB | 192..375 | 71..246 | 168 | 31.9 | Plus |
CG34383-PK | 2020 | CG34383-PK | 192..375 | 71..246 | 168 | 31.9 | Plus |
CG34383-PF | 2020 | CG34383-PF | 192..375 | 71..246 | 168 | 31.9 | Plus |
CG34383-PD | 2020 | CG34383-PD | 192..375 | 71..246 | 168 | 31.9 | Plus |
CG34383-PL | 2037 | CG34383-PL | 214..397 | 71..246 | 168 | 31.9 | Plus |
CG34383-PG | 2042 | CG34383-PG | 214..397 | 71..246 | 168 | 31.9 | Plus |
CG34383-PE | 2050 | CG34383-PE | 192..375 | 71..246 | 168 | 31.9 | Plus |
CG34383-PI | 3090 | CG34383-PI | 192..375 | 71..246 | 168 | 31.9 | Plus |
Smr-PF | 3601 | CG4013-PF | 515..826 | 26..378 | 167 | 24.9 | Plus |
Smr-PE | 3601 | CG4013-PE | 515..826 | 26..378 | 167 | 24.9 | Plus |
Smr-PD | 3601 | CG4013-PD | 515..826 | 26..378 | 167 | 24.9 | Plus |
Smr-PG | 3607 | CG4013-PG | 521..832 | 26..378 | 167 | 24.9 | Plus |
cno-PF | 1721 | CG42312-PF | 959..1107 | 21..163 | 167 | 37.2 | Plus |
cno-PC | 1882 | CG2534-PB | 1120..1268 | 21..163 | 167 | 37.2 | Plus |
cno-PG | 1951 | CG42312-PG | 1189..1337 | 21..163 | 167 | 37.2 | Plus |
cno-PH | 1968 | CG42312-PH | 1206..1354 | 21..163 | 167 | 37.2 | Plus |
cno-PJ | 2051 | CG42312-PJ | 1289..1437 | 21..163 | 167 | 37.2 | Plus |
Pdp1-PJ | 633 | CG17888-PJ | 98..374 | 48..372 | 166 | 29 | Plus |
Pdp1-PD | 647 | CG17888-PD | 98..374 | 48..372 | 166 | 29 | Plus |
CG7786-PA | 192 | CG7786-PA | 116..170 | 383..437 | 159 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15181-PA | 507 | GI15181-PA | 1..507 | 1..447 | 1197 | 68.4 | Plus |
Dmoj\GI18660-PA | 249 | GI18660-PA | 174..228 | 383..437 | 168 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14307-PA | 495 | GL14307-PA | 1..495 | 1..448 | 1303 | 69.4 | Plus |
Dper\GL11555-PA | 217 | GL11555-PA | 141..195 | 383..437 | 170 | 61.8 | Plus |
Dper\GL17823-PA | 284 | GL17823-PA | 215..268 | 381..434 | 153 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20715-PA | 493 | GA20715-PA | 1..493 | 1..448 | 1305 | 69.7 | Plus |
Dpse\GA20586-PA | 219 | GA20586-PA | 143..197 | 383..437 | 170 | 61.8 | Plus |
Dpse\GA28498-PA | 592 | GA28498-PA | 523..576 | 381..434 | 158 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18880-PA | 445 | GM18880-PA | 1..445 | 1..448 | 2282 | 97.5 | Plus |
Dsec\GM20077-PA | 192 | GM20077-PA | 116..170 | 383..437 | 166 | 60 | Plus |
Dsec\GM24985-PA | 581 | GM24985-PA | 512..565 | 381..434 | 158 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15226-PA | 192 | GD15226-PA | 116..170 | 383..437 | 167 | 60 | Plus |
Dsim\GD13032-PA | 647 | GD13032-PA | 578..631 | 381..434 | 159 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17061-PA | 491 | GJ17061-PA | 1..489 | 1..445 | 1159 | 64.4 | Plus |
Dvir\GJ21676-PA | 192 | GJ21676-PA | 117..171 | 383..437 | 169 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17868-PA | 445 | GK17868-PA | 1..445 | 1..448 | 1107 | 70.1 | Plus |
Dwil\GK20980-PA | 196 | GK20980-PA | 120..174 | 383..437 | 167 | 61.8 | Plus |
Dwil\GK10510-PA | 610 | GK10510-PA | 541..594 | 381..434 | 157 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16945-PA | 448 | GE16945-PA | 1..448 | 1..448 | 2268 | 97.3 | Plus |
Dyak\GE14085-PA | 192 | GE14085-PA | 116..170 | 383..437 | 166 | 60 | Plus |
Dyak\GE20386-PA | 586 | GE20386-PA | 517..570 | 381..434 | 158 | 55.6 | Plus |
Translation from 111 to 1457
> FI04928.hyp MLMHEKLMAGQFFDLKTDRKPLMHHHQYQHHQQQPLHHLPHSQLPVQGSL GLPKMDLYTAYAYQQQLLGAALSQQQQQQQQQQQHQQLQQQHTSSAEVLD LSRRCDSVETPRKTPSPYQTSYSYGSGSPSASPTSNLLYAAQMQQQQHQQ QQQQQQQQQQLASLYPAFYYSNIKQEQATPTAAPPKVTPTANLLQTFAAA SAAAAAAAAASSTNSPRPASNASTMQIDVLENPLSPAVEATTPTTSSSGE AGKNTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRS SNGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAAEESSDCDSQ AGNFESKSATSSSSNLANATAANSGISSGSQVKDAAYYERRRKNNAAAKK SRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKVQLAAFTSAKVTTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gt-PB | 448 | CG7952-PB | 1..448 | 1..448 | 2262 | 100 | Plus |
Smr-PF | 3601 | CG4013-PF | 59..307 | 27..236 | 202 | 30.7 | Plus |
Smr-PE | 3601 | CG4013-PE | 59..307 | 27..236 | 202 | 30.7 | Plus |
Smr-PD | 3601 | CG4013-PD | 59..307 | 27..236 | 202 | 30.7 | Plus |
Smr-PG | 3607 | CG4013-PG | 62..313 | 24..236 | 197 | 29.5 | Plus |
Smr-PF | 3601 | CG4013-PF | 515..826 | 26..378 | 167 | 24.9 | Plus |
Smr-PE | 3601 | CG4013-PE | 515..826 | 26..378 | 167 | 24.9 | Plus |
Smr-PD | 3601 | CG4013-PD | 515..826 | 26..378 | 167 | 24.9 | Plus |