Clone FI05214 Report

Search the DGRC for FI05214

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:52
Well:14
Vector:pOT2
Associated Gene/TranscriptZw-RA
Protein status:FI05214.pep: gold
Sequenced Size:2061

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Zw 2008-12-18 5.12 accounting

Clone Sequence Records

FI05214.complete Sequence

2061 bp assembled on 2008-11-19

GenBank Submission: BT053690.1

> FI05214.complete
AACGATCGTGCTTATCTTCATTACTACTACCGCTTCCACCGAGGCTTCGC
GACTCCGTACCCGTACTCGCTTTGTTTTACGTTTGCGCTACTAGTTAGTG
AATCCGACGACGACGACCTGCGCGTGCGATTAAAGCGCCGCAACTCTTTG
TAATTACACAGCCAGAGCCGCAGAGGTTGCTCAAAATCCAGCGACTGGAG
AAATCGTATATCGAGTTGGAAATCCGAATCGAAAGGCTTGCGTATACATA
GTTGTCACACTTTTGCTTTTAAACAGAAAAATCCATTCACATTCGGGTCA
AGATGGCAACGCAAAAGGAAGATCACACCGCCCTGGATCTCATAATCAAG
TCACTCAAGTCGCCTACAATGGTCTGCGAGGGAACCCACTTTGACGGCAA
GATTCCGCACACGTTCGTCATCTTTGGGGCGTCGGGCGATCTGGCCAAGA
AGAAGATCTACCCCACGCTCTGGTGGCTCTACCGCGATGACCTGCTGCCC
AAGCCGACCAAGTTCTGCGGCTATGCCCGTTCCATGCTGACCGTCGATAG
CATCAAGGAGCAGTGTCTGCCGTACATGAAGGTCCAGCCGCACGAGCAGA
AGAAGTACGAGGAGTTCTGGGCCCTCAATGAGTACGTGTCCGGCAGATAT
GACGGACGCACTGGCTTCGAGCTGCTTAACCAGCAGCTGGAGATTATGGA
GAACAAGAACAAGGCCAACCGCATCTTCTATCTGGCCCTGCCGCCCAGCG
TCTTCGAGGAGGTGACTGTCAACATCAAGCAGATCTGCATGTCGGTCTGC
GGTTGGAACCGCGTGATCATCGAGAAGCCTTTCGGCCGGGATGACGCCTC
CTCGCAGGCGCTGAGCGACCATCTGGCCGGTCTGTTCCAGGAGGATCAGC
TGTACCGCATCGATCACTACCTGGGCAAGGAGATGGTGCAGAACCTGATG
ACCATACGCTTCGGCAACAAGATCCTCAGCTCGACGTGGAACCGCGAGAA
CATCGCCTCCGTGCTGATCACGTTCAAGGAGCCCTTCGGCACGCAGGGTC
GTGGCGGCTACTTCGACGAGTTCGGCATCATACGCGACGTGATGCAGAAC
CATCTGCTGCAGATCCTCTCGCTGGTGGCCATGGAGAAGCCGGTGAGCTG
CCACCCGGACGACATTCGTGACGAGAAGGTCAAGGTGCTGAAGAGCATCG
AGGCCCTGACGCTGGATGACATGGTGCTGGGCCAGTACCTGGGCAATCCG
CAGGGTACAAACGATGATGCGCGCACGGGCTACGTGGAGGACCCCACCGT
TAGCAACGATTCGAACACGCCCACCTACGCCCTCGGCGTGCTCAAGATCA
ACAACGAGCGCTGGCAGGGAGTGCCCTTCATCCTGCGCTGCGGCAAGGCG
CTGAACGAGCGCAAGGCGGAGGTGCGCATCCAGTACCAGGACGTGCCCGG
CGACATCTTCGAGGGCAATACGAAGCGCAACGAGCTGGTCATACGCGTCC
AGCCGGGCGAGGCCCTGTACTTTAAGATGATGACCAAGAGCCCCGGCATC
ACGTTCGACATCGAGGAGACGGAGCTGGACCTCACCTACGAGCACCGCTA
CAAGGACTCCTACCTGCCGGACGCGTACGAGCGTCTCATCCTCGACGTCT
TCTGCGGCTCCCAGATGCACTTCGTCCGCTCGGACGAGCTGCGCGAGGCG
TGGCGCATCTTCACGCCCATTCTGCACCAGATCGAGAAGGAGCACATTCG
TCCAATCACCTACCAGTACGGATCGCGCGGTCCCAAGGAGGCGGACCGCA
AGTGCGAGGAGAACAATTTCAAGTACTCCGGCTCCTACAAGTGGCACGGC
GGCAAGGCGGCCACGTCCAATCACTGAGCGTTTGGAGCACACCAATCCCC
GGGCTGGGTTCGCAGGATACTCCTCTTTGTCCGCACGTACATGTACATAC
ATACATATATATGTATATATACATATATGCATTCTTTGGTTATTTGTAAT
TCGGTCTGTACAAGATTTTTTTTTATTAAATATACAAAATAGTGAAAAAA
AAAAAAAAAAA

FI05214.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
Zw-RA 2511 Zw-RA 423..2466 1..2044 10115 99.6 Plus
Zw-RB 2117 Zw-RB 349..2072 321..2044 8515 99.5 Plus
Zw.a 1842 Zw.a 75..1797 322..2044 8510 99.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:42:55
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 19559910..19561155 799..2044 6215 99.9 Plus
chrX 22417052 chrX 19556095..19556415 1..321 1605 100 Plus
chrX 22417052 chrX 19559288..19559551 320..583 1320 100 Plus
chrX 22417052 chrX 19559610..19559829 580..799 1100 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:14:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:42:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19671108..19672353 799..2044 6125 99.4 Plus
X 23542271 X 19667300..19667620 1..321 1605 100 Plus
X 23542271 X 19670482..19670745 320..583 1320 100 Plus
X 23542271 X 19670804..19671023 580..799 1100 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:31:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 19679206..19680451 799..2044 6125 99.4 Plus
X 23527363 X 19675398..19675718 1..321 1605 100 Plus
X 23527363 X 19678580..19678843 320..583 1320 100 Plus
X 23527363 X 19678902..19679121 580..799 1100 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:42:54 has no hits.

FI05214.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:43:59 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 19556095..19556415 1..321 100 -> Plus
chrX 19559290..19559549 322..581 100 -> Plus
chrX 19559612..19559829 582..799 100 -> Plus
chrX 19559911..19561155 800..2044 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:49:30 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
Zw-RA 1..1575 303..1877 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:20:27 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
Zw-RA 1..1575 303..1877 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:39:23 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
Zw-RA 1..1575 303..1877 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:37:10 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
Zw-RA 1..1575 303..1877 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-19 14:00:02 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
Zw-RA 68..2110 1..2043 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:20:27 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
Zw-RA 68..2110 1..2043 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:39:23 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
Zw-RA 1..2044 1..2044 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:37:10 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
Zw-RA 49..2092 1..2044 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:43:59 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
X 19670484..19670743 322..581 100 -> Plus
X 19670806..19671023 582..799 100 -> Plus
X 19667300..19667620 1..321 100 -> Plus
X 19671109..19672353 800..2044 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:43:59 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
X 19670484..19670743 322..581 100 -> Plus
X 19670806..19671023 582..799 100 -> Plus
X 19667300..19667620 1..321 100 -> Plus
X 19671109..19672353 800..2044 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:43:59 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
X 19670484..19670743 322..581 100 -> Plus
X 19670806..19671023 582..799 100 -> Plus
X 19667300..19667620 1..321 100 -> Plus
X 19671109..19672353 800..2044 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:39:23 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19561333..19561653 1..321 100 -> Plus
arm_X 19564517..19564776 322..581 100 -> Plus
arm_X 19564839..19565056 582..799 100 -> Plus
arm_X 19565142..19566386 800..2044 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:51:55 Download gff for FI05214.complete
Subject Subject Range Query Range Percent Splice Strand
X 19675398..19675718 1..321 100 -> Plus
X 19678582..19678841 322..581 100 -> Plus
X 19678904..19679121 582..799 100 -> Plus
X 19679207..19680451 800..2044 99   Plus

FI05214.pep Sequence

Translation from 302 to 1876

> FI05214.pep
MATQKEDHTALDLIIKSLKSPTMVCEGTHFDGKIPHTFVIFGASGDLAKK
KIYPTLWWLYRDDLLPKPTKFCGYARSMLTVDSIKEQCLPYMKVQPHEQK
KYEEFWALNEYVSGRYDGRTGFELLNQQLEIMENKNKANRIFYLALPPSV
FEEVTVNIKQICMSVCGWNRVIIEKPFGRDDASSQALSDHLAGLFQEDQL
YRIDHYLGKEMVQNLMTIRFGNKILSSTWNRENIASVLITFKEPFGTQGR
GGYFDEFGIIRDVMQNHLLQILSLVAMEKPVSCHPDDIRDEKVKVLKSIE
ALTLDDMVLGQYLGNPQGTNDDARTGYVEDPTVSNDSNTPTYALGVLKIN
NERWQGVPFILRCGKALNERKAEVRIQYQDVPGDIFEGNTKRNELVIRVQ
PGEALYFKMMTKSPGITFDIEETELDLTYEHRYKDSYLPDAYERLILDVF
CGSQMHFVRSDELREAWRIFTPILHQIEKEHIRPITYQYGSRGPKEADRK
CEENNFKYSGSYKWHGGKAATSNH*

FI05214.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:32:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20421-PA 524 GF20421-PA 1..523 1..523 2625 91 Plus
Dana\GF14919-PA 499 GF14919-PA 1..496 23..518 2299 84.9 Plus
Dana\GF23498-PA 536 GF23498-PA 6..495 30..515 1033 40.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:32:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\Zw-PA 524 GG19245-PA 1..523 1..523 2753 96.7 Plus
Dere\GG13190-PA 537 GG13190-PA 12..495 36..515 1048 43.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:32:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12489-PA 528 GH12489-PA 14..527 10..523 2389 84.4 Plus
Dgri\GH17134-PA 522 GH17134-PA 12..499 36..523 1087 42.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
Zw-PA 524 CG12529-PA 1..524 1..524 2797 100 Plus
Zw-PC 502 CG12529-PC 1..502 23..524 2689 100 Plus
Zw-PB 502 CG12529-PB 1..502 23..524 2689 100 Plus
CG7140-PB 533 CG7140-PB 12..495 36..515 1038 43.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:32:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\G6pd-PA 525 GI11107-PA 11..524 10..523 2313 82.1 Plus
Dmoj\GI11743-PA 523 GI11743-PA 8..502 32..523 1128 42.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18263-PA 529 GL18263-PA 1..529 1..524 2625 90.9 Plus
Dper\GL25454-PA 413 GL25454-PA 13..411 37..432 862 42.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11679-PA 529 GA11679-PA 1..529 1..524 2625 90.9 Plus
Dpse\GA28263-PA 530 GA28263-PA 13..495 37..518 1025 42 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:32:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\Zw-PA 524 GM22981-PA 1..523 1..523 2759 96.2 Plus
Dsec\GM22102-PA 533 GM22102-PA 12..495 36..515 1052 42.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:32:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12078-PA 280 GD12078-PA 12..277 36..296 618 42.5 Plus
Dsim\Zw-PA 90 GD24877-PA 1..89 435..523 480 96.6 Plus
Dsim\GD12079-PA 145 GD12079-PA 1..107 407..515 183 37.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15960-PA 524 GJ15960-PA 5..523 2..523 2205 78 Plus
Dvir\GJ11415-PA 530 GJ11415-PA 7..502 31..524 1131 43.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20019-PA 518 GK20019-PA 1..518 1..518 2578 89.8 Plus
Dwil\GK12143-PA 534 GK12143-PA 12..495 36..518 1111 44 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Zw-PA 524 GE15864-PA 1..523 1..523 2764 97.1 Plus
Dyak\GE22705-PA 537 GE22705-PA 12..495 36..515 1049 43.1 Plus
Dyak\GE19513-PA 537 GE19513-PA 12..495 36..515 1048 43.1 Plus

FI05214.hyp Sequence

Translation from 302 to 1876

> FI05214.hyp
MATQKEDHTALDLIIKSLKSPTMVCEGTHFDGKIPHTFVIFGASGDLAKK
KIYPTLWWLYRDDLLPKPTKFCGYARSMLTVDSIKEQCLPYMKVQPHEQK
KYEEFWALNEYVSGRYDGRTGFELLNQQLEIMENKNKANRIFYLALPPSV
FEEVTVNIKQICMSVCGWNRVIIEKPFGRDDASSQALSDHLAGLFQEDQL
YRIDHYLGKEMVQNLMTIRFGNKILSSTWNRENIASVLITFKEPFGTQGR
GGYFDEFGIIRDVMQNHLLQILSLVAMEKPVSCHPDDIRDEKVKVLKSIE
ALTLDDMVLGQYLGNPQGTNDDARTGYVEDPTVSNDSNTPTYALGVLKIN
NERWQGVPFILRCGKALNERKAEVRIQYQDVPGDIFEGNTKRNELVIRVQ
PGEALYFKMMTKSPGITFDIEETELDLTYEHRYKDSYLPDAYERLILDVF
CGSQMHFVRSDELREAWRIFTPILHQIEKEHIRPITYQYGSRGPKEADRK
CEENNFKYSGSYKWHGGKAATSNH*

FI05214.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:18
Subject Length Description Subject Range Query Range Score Percent Strand
Zw-PA 524 CG12529-PA 1..524 1..524 2797 100 Plus
Zw-PC 502 CG12529-PC 1..502 23..524 2689 100 Plus
Zw-PB 502 CG12529-PB 1..502 23..524 2689 100 Plus
CG7140-PB 533 CG7140-PB 12..495 36..515 1038 43.5 Plus