Clone FI05227 Report

Search the DGRC for FI05227

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:52
Well:27
Vector:pOT2
Associated Gene/TranscriptCG1622-RA
Protein status:FI05227.pep: gold
Sequenced Size:1674

Clone Sequence Records

FI05227.complete Sequence

1674 bp assembled on 2009-06-10

GenBank Submission: BT088797.1

> FI05227.complete
CATTTTCTCGCATGTAAATTGCAAATTGTGCTTGCATTTTTCGCGTTTTC
CCGCGCACACAATCCTTCGGTAGCCGTAAAATTAATGCGCCCAACAGTAA
AAGAGCAGTAGGCATGGACGAAGATTATTCGGCGTCATCTTCGGCCGGCG
GTGGCAAGAAGGCCGGCAAGCAGCACAACACGCTGCCCTTTTGGGGCAAC
GAATCCTCGATGAACTTGAATGCCCTGATCCTGGCCAACATCCAGAGCTC
CAGCTACTTCAAAGTCCATTTGTTTAAACTGAAAACGTACCATGAAGTGG
TCGACGAGATCTACTACCAGGTGAAGCATATGGAGCCCTGGGAGCGTGGA
TCCCGCAAAACGTCCGGACAAACGGGCATGTGCGGCGGTGTGCGAGGCGT
TGGCGCCGGCGGCATTGTGTCAACGGCATATTGCCTGCTCTACAAGCTAT
ACACGCTGCGGCTGACCCGGAAGCAGATCAACGGACTGCTCAATCATACA
GACTCGGCCTACATCCGGGCACTAGGCTTTATGTACTTGCGATACACGCA
GCCGCCGGGTGACCTTTACGACTGGTATGAGGACTATTTGCAGGACGAGG
AGGAGATCGACGTGAAAGCGGGCGGCGGCCAGGTCTTAACCATCGGACAG
ATGGTTTATCAGTTTATGACCAAGCTGGACTGGTTCTCCACGCTCTTTCC
GCGCATCCCCGTGCCGATTCAAAAGCAGATCGAGAAGAGGATCGAGCAAT
ACTGTAGGGAGCAGGGGGTGACCGTCCATCAGTTGAGCACGGGTCGGTCA
ACGGCGGGCACTGGTGGTGGTCCTGGAGCCGCTGGCCAGGATGCGGACTA
CCAGGACTATCCGGAGGGAGGAGTAGAGCGTGGAAGCGGCGGACGTGGCG
GTGGACAAGCTGGCTCCCGTTCCAACGCCTACCCACAACCGAATAACTAC
CGCAACGATTATGACGAGCGTGACTACTATGCTGCCGCGTCTGGCTCGTC
CTACGGCCGTGGTCGCGGTGGCTATGAGGACTACCCACCGGCGCCGCTGC
CACCACAGATGCCTTACGGCGAGCGCGAAAGGGAGAGGGATCGCGATCGG
GATAAGAATAAGGATTACGACCGCCACCGCAGCAAGCACAAGAAGAAGCA
CAACCATAGACAAAGCTCGCGTAGCCGCAGCAGAAGCCGCAGCCGGAGTC
GCCACCGCTCCGAGCGCCATGAGCGCAAGCGGGACGGTGGTGGCTACGAG
CGGAGCAGCAAGAGCCGGCACAACGAACACTATGAAGAGCGTGAGCGACG
TCATCGGTGAAGACCGATTCCACCCACCAAAACTAGCCTCCTCCTCCTTA
AGTTGTTCTGTTACTAACTAACTTTGTTTCACCATAGTACTACTACACAT
TTTTTTTTAATTTGTCAAACTCTATCTACACTTTGGAAGCCACGAACGTC
AGTTGCGCTTCTTACTCAGGTTAAACACTCTCCGAAACCCCGAAATGTTC
CATAACTAACACTAAATCTAGACACAATCACATGCGGACACAGCAGCAAG
GCTATATTTTGTAATTTGTGACTACACTTACGCTGATAAAATAGTTTTCA
AGTTGTGTTTATGAAAATAAAGTCAAAACTTATTTGTTTAAAACGTTAAA
AAAAAAAAAAAAAAAAAAAAAAAA

FI05227.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:31:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG1622-RA 1848 CG1622-RA 96..1742 1..1647 8205 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 13189706..13190723 630..1647 5075 99.9 Plus
chrX 22417052 chrX 13188121..13188263 122..264 715 100 Plus
chrX 22417052 chrX 13188563..13188699 390..526 670 99.3 Plus
chrX 22417052 chrX 13188341..13188470 263..392 650 100 Plus
chrX 22417052 chrX 13187933..13188055 1..123 615 100 Plus
chrX 22417052 chrX 13189507..13189627 514..634 560 97.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:14:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:23:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13298893..13299910 630..1647 5090 100 Plus
X 23542271 X 13297305..13297447 122..264 700 99.3 Plus
X 23542271 X 13297747..13297883 390..526 685 100 Plus
X 23542271 X 13297525..13297654 263..392 650 100 Plus
X 23542271 X 13297117..13297239 1..123 600 99.2 Plus
X 23542271 X 13298694..13298814 514..634 560 97.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 13306991..13308008 630..1647 5090 100 Plus
X 23527363 X 13305403..13305545 122..264 700 99.3 Plus
X 23527363 X 13305845..13305981 390..526 685 100 Plus
X 23527363 X 13305623..13305752 263..392 650 100 Plus
X 23527363 X 13305215..13305337 1..123 600 99.1 Plus
X 23527363 X 13306792..13306912 514..634 560 97.5 Plus
Blast to na_te.dros performed on 2019-03-16 18:23:37 has no hits.

FI05227.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:24:33 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 13188343..13188467 265..389 100 -> Plus
chrX 13188563..13188698 390..525 99 -> Plus
chrX 13189519..13189625 526..632 100 -> Plus
chrX 13187933..13188055 1..123 100 -> Plus
chrX 13188123..13188263 124..264 100 -> Plus
chrX 13189709..13190723 633..1647 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:20 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
CG1622-RA 1..1197 114..1310 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:47:31 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
CG1622-RA 1..1197 114..1310 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:19:07 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
CG1622-RA 1..1197 114..1310 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:38:55 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
CG1622-RA 1..1197 114..1310 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-10 15:01:57 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
CG1622-RA 19..1665 1..1647 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:47:31 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
CG1622-RA 19..1665 1..1647 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:07 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
CG1622-RA 36..1682 1..1647 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:38:55 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
CG1622-RA 36..1682 1..1647 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:33 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
X 13297527..13297651 265..389 100 -> Plus
X 13297747..13297882 390..525 100 -> Plus
X 13298706..13298812 526..632 100 -> Plus
X 13297117..13297239 1..123 99 -> Plus
X 13297307..13297447 124..264 99 -> Plus
X 13298896..13299910 633..1647 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:33 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
X 13297527..13297651 265..389 100 -> Plus
X 13297747..13297882 390..525 100 -> Plus
X 13298706..13298812 526..632 100 -> Plus
X 13297117..13297239 1..123 99 -> Plus
X 13297307..13297447 124..264 99 -> Plus
X 13298896..13299910 633..1647 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:24:33 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
X 13297527..13297651 265..389 100 -> Plus
X 13297747..13297882 390..525 100 -> Plus
X 13298706..13298812 526..632 100 -> Plus
X 13297117..13297239 1..123 99 -> Plus
X 13297307..13297447 124..264 99 -> Plus
X 13298896..13299910 633..1647 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:07 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13191150..13191272 1..123 99 -> Plus
arm_X 13191340..13191480 124..264 99 -> Plus
arm_X 13191560..13191684 265..389 100 -> Plus
arm_X 13191780..13191915 390..525 100 -> Plus
arm_X 13192739..13192845 526..632 100 -> Plus
arm_X 13192929..13193943 633..1647 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:22:59 Download gff for FI05227.complete
Subject Subject Range Query Range Percent Splice Strand
X 13306994..13308008 633..1647 100   Plus
X 13305215..13305337 1..123 99 -> Plus
X 13305405..13305545 124..264 99 -> Plus
X 13305845..13305980 390..525 100 -> Plus
X 13305625..13305749 265..389 100 -> Plus
X 13306804..13306910 526..632 100 -> Plus

FI05227.hyp Sequence

Translation from 113 to 1309

> FI05227.hyp
MDEDYSASSSAGGGKKAGKQHNTLPFWGNESSMNLNALILANIQSSSYFK
VHLFKLKTYHEVVDEIYYQVKHMEPWERGSRKTSGQTGMCGGVRGVGAGG
IVSTAYCLLYKLYTLRLTRKQINGLLNHTDSAYIRALGFMYLRYTQPPGD
LYDWYEDYLQDEEEIDVKAGGGQVLTIGQMVYQFMTKLDWFSTLFPRIPV
PIQKQIEKRIEQYCREQGVTVHQLSTGRSTAGTGGGPGAAGQDADYQDYP
EGGVERGSGGRGGGQAGSRSNAYPQPNNYRNDYDERDYYAAASGSSYGRG
RGGYEDYPPAPLPPQMPYGERERERDRDRDKNKDYDRHRSKHKKKHNHRQ
SSRSRSRSRSRSRHRSERHERKRDGGGYERSSKSRHNEHYEERERRHR*

FI05227.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG1622-PA 398 CG1622-PA 1..398 1..398 2154 100 Plus
CG1622-PB 178 CG1622-PB 1..174 1..174 931 100 Plus
CG1622-PC 141 CG1622-PC 1..138 1..138 728 100 Plus

FI05227.pep Sequence

Translation from 113 to 1309

> FI05227.pep
MDEDYSASSSAGGGKKAGKQHNTLPFWGNESSMNLNALILANIQSSSYFK
VHLFKLKTYHEVVDEIYYQVKHMEPWERGSRKTSGQTGMCGGVRGVGAGG
IVSTAYCLLYKLYTLRLTRKQINGLLNHTDSAYIRALGFMYLRYTQPPGD
LYDWYEDYLQDEEEIDVKAGGGQVLTIGQMVYQFMTKLDWFSTLFPRIPV
PIQKQIEKRIEQYCREQGVTVHQLSTGRSTAGTGGGPGAAGQDADYQDYP
EGGVERGSGGRGGGQAGSRSNAYPQPNNYRNDYDERDYYAAASGSSYGRG
RGGYEDYPPAPLPPQMPYGERERERDRDRDKNKDYDRHRSKHKKKHNHRQ
SSRSRSRSRSRSRHRSERHERKRDGGGYERSSKSRHNEHYEERERRHR*

FI05227.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:54:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19399-PA 418 GF19399-PA 31..418 20..398 1169 77.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17767-PA 402 GG17767-PA 1..402 1..398 1384 92.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:54:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12816-PA 428 GH12816-PA 25..335 20..326 1124 76.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG1622-PA 398 CG1622-PA 1..398 1..398 2154 100 Plus
CG1622-PB 178 CG1622-PB 1..174 1..174 931 100 Plus
CG1622-PC 141 CG1622-PC 1..138 1..138 728 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:54:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15920-PA 443 GI15920-PA 1..324 1..326 1149 75 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:54:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14052-PA 462 GA14052-PA 26..445 20..389 1130 69.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:54:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11616-PA 353 GM11616-PA 1..353 57..398 1237 91.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17111-PA 569 GD17111-PA 177..569 4..398 2048 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16827-PA 415 GJ16827-PA 24..415 20..398 1198 68.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25077-PA 436 GK25077-PA 47..436 20..398 1100 69.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17058-PA 406 GE17058-PA 1..393 1..387 1217 92.9 Plus