Clone FI05233 Report

Search the DGRC for FI05233

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:52
Well:33
Vector:pOT2
Associated Gene/TranscriptCG18292-RA
Protein status:FI05233.pep: gold
Sequenced Size:1827

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18292 2008-12-18 5.12 accounting

Clone Sequence Records

FI05233.complete Sequence

1827 bp assembled on 2008-09-15

GenBank Submission: BT044505.1

> FI05233.complete
TAATAACGCCTCCTGATATCGATATCGATATCATATCACAAAAAACAATA
AACCAAAAAAGAAACGCTAAAAACTAGTAGTTTTGTGTGCCAGGAAAACG
GAAAGGTGGACATAGTTAAGTTACCACAACAACCGACGGATATCGACTCC
AGACACCACATCGCCCAGCGCCACCATGGACATCATGGATATCCAGGCCG
TAGAGTCCAAGCTGAGTGACGTCACGGTGACACCGATACCGCGCAGCCAA
GTGCAGAATTTCTACAATTACCAGCAGCAGCGGGAGCAGCGCGAGCAGCA
GCCCCAAATCCAGATATCGGCCATCCACCACTCGCGTGGATCCGTTGGCG
GAGGAGGCGGATCCAACTCATCCAACGCTGCCACCGACTACTCCACGAGC
AGCGGTGGCAAGCGGGAGCGGGACCGCTCCTCCGCCAGCGACTACAGCAG
CTCGTCCAGCAAGCAGAGCTCCGCTGCAGCGGCCAATGCAGCAGCAGCTG
CCGCCGCCGTCGCTGCCCTCCAATACTCCCCGCAGTTCCTCCAGGCCCAG
CTGGCGCTACTCCAGCAGCAGTCGAACACGACGGCCACGCCGGCAGCCGT
CGCCGCTGCGGCCCTCTCGCTGGCCAACATGTGCTCCAGCAATGGTGGTC
AGCGGAATTCCGGTGCCGGCGTTTCCTCCACCTCCTCTGGCAGCAATGGC
CAGAGCATGGGCCTGAATCTGAGCTCATCGCAGCTAAAGTACCCGCCACC
CTCCACCTCGCCCGTGGTGGTGACCACCCAAACTTCGGCCAATATCACCA
CGCCGCTGACCTCCACGGCCAGCCTGCCCTCAGTGGGCCCGGGCAATGGG
CTGACCAAGTACGCCCAGCTGCTGGCCGTCATTGAGGAGATGGGCCGCGA
TATCCGGCCCACGTACACGGGCTCGCGCAGCTCCACGGAGCGTCTCAAGC
GGGGCATTGTCCATGCCCGCATCCTGGTGCGCGAATGCCTCATGGAAACG
GAGCGTGCGGCGCGCCAATGAGAGGAGGAGTCGCTGGCGCCGCAGCTGGC
GACCCCGGAGTGAAATGGACCAGGAGGCGAGGATCGGCCTCATCTAGGTT
AATTACCCCCAAACAAAAAAAACAAAAAAAAACACGGACATATAGCAAAC
GCAAAGATCCATTTTGTCCCAATTAAGCATTAAAGTGTAGCAATTTGTAC
TAACTTGTAAGCCCACATCAACTTAATGGCCCTCGGGCCGCCGGACCATA
GTTAAAGAATGTTTAGACTAGCTCAGGTTACAATCGGTTAAATCGACAAT
GCTACAAGTATAGCTGCAGCCCAAGTTATTGGACTTGTGTATCTCTACCG
TATACCCATTAATTTGTATCCGTTAATGCAAGACCCAGTTGCTCCTGTGT
CTGCGTTAGTGAATGCAATCAATTACGAGTATCTAATGGCAACCGCCGTC
GAGGATTTGCAGATACAAATGCAGATGCAGATACGGATGTATCTGGACAG
GATTTGTGCGAGTTTGTCACTGCCGGATAAAGCTGCTCCTCGTTATTTTA
GAGAACTATACAAATGCAGATATGTAGATGTAGTTAAGCAGAGATATATG
TATACATATATACTTGTTATGCAAGCGAACAGTGTGCATGTCCAAGTGAA
TGGTGAATTAGTGGCAATTGACACGAGAATATTTATATATGTATACACAT
TATTTACTATATGTATGAGAGCAAATACGACTAAGTTCAAGCATGTATAC
CAAACCGAAACCGAAATCGAAATCGAAATAAATGCGCTATTTTGGTTTTT
GTAAACGCAAAAAAAAAAAAAAAAAAA

FI05233.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
nc_23059.a 2366 nc_23059.a 1..1809 1..1809 9045 100 Plus
CG18292-RA 1812 CG18292-RA 1..1809 1..1809 9045 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 11029140..11030947 1..1808 8950 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:14:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11137882..11139690 1..1809 9045 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 11145980..11147788 1..1809 9045 100 Plus
Blast to na_te.dros performed 2019-03-16 00:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Kepler 722 Dbuz\Kepler KEPLER 722bp 403..528 1626..1501 143 59.1 Minus

FI05233.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:04:23 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 11029140..11030947 1..1808 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:49:47 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RA 1..846 176..1021 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:14 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RA 1..846 176..1021 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:33:33 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RB 1..888 176..1063 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:56:52 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RB 1..888 176..1063 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:48:20 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RA 1..1808 1..1808 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:13 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RA 1..1808 1..1808 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:33:33 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RA 24..1831 1..1808 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:13:10 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RA 1..1808 1..1808 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:56:52 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
CG18292-RA 24..1831 1..1808 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:23 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
X 11137882..11139689 1..1808 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:23 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
X 11137882..11139689 1..1808 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:23 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
X 11137882..11139689 1..1808 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:33:33 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11031915..11033722 1..1808 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:39:00 Download gff for FI05233.complete
Subject Subject Range Query Range Percent Splice Strand
X 11145980..11147787 1..1808 100   Plus

FI05233.pep Sequence

Translation from 175 to 1020

> FI05233.pep
MDIMDIQAVESKLSDVTVTPIPRSQVQNFYNYQQQREQREQQPQIQISAI
HHSRGSVGGGGGSNSSNAATDYSTSSGGKRERDRSSASDYSSSSSKQSSA
AAANAAAAAAAVAALQYSPQFLQAQLALLQQQSNTTATPAAVAAAALSLA
NMCSSNGGQRNSGAGVSSTSSGSNGQSMGLNLSSSQLKYPPPSTSPVVVT
TQTSANITTPLTSTASLPSVGPGNGLTKYAQLLAVIEEMGRDIRPTYTGS
RSSTERLKRGIVHARILVRECLMETERAARQ*

FI05233.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20296-PA 268 GF20296-PA 1..268 1..281 764 81.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18393-PA 283 GG18393-PA 1..283 1..281 1402 97.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24396-PA 319 GH24396-PA 1..319 1..281 767 63.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:37
Subject Length Description Subject Range Query Range Score Percent Strand
CDK2AP1-PB 295 CG18292-PB 1..281 1..281 1380 100 Plus
CDK2AP1-PA 281 CG18292-PA 1..281 1..281 1380 100 Plus
oc-PE 539 CG12154-PE 103..331 21..225 160 27.2 Plus
oc-PD 542 CG12154-PD 106..334 21..225 160 27.2 Plus
oc-PG 542 CG12154-PG 106..334 21..225 160 27.2 Plus
oc-PC 542 CG12154-PC 106..334 21..225 160 27.2 Plus
oc-PF 548 CG12154-PF 112..340 21..225 160 27.2 Plus
FBXO11-PB 1182 CG9461-PB 140..300 63..218 154 32.9 Plus
FBXO11-PA 1182 CG9461-PA 140..300 63..218 154 32.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15301-PA 302 GI15301-PA 1..302 1..281 760 65.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20277-PA 282 GL20277-PA 1..282 1..281 766 77.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14878-PA 282 GA14878-PA 1..282 1..281 731 74.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11459-PA 281 GM11459-PA 1..281 1..281 1426 98.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17007-PA 75 GD17007-PA 1..56 1..56 302 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:41:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16507-PA 306 GJ16507-PA 1..306 1..281 768 67.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:41:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15962-PA 303 GK15962-PA 1..303 1..281 602 75.2 Plus
Dwil\GK18226-PA 204 GK18226-PA 142..195 224..277 147 51.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15911-PA 283 GE15911-PA 1..283 1..281 1402 97.2 Plus

FI05233.hyp Sequence

Translation from 175 to 1020

> FI05233.hyp
MDIMDIQAVESKLSDVTVTPIPRSQVQNFYNYQQQREQREQQPQIQISAI
HHSRGSVGGGGGSNSSNAATDYSTSSGGKRERDRSSASDYSSSSSKQSSA
AAANAAAAAAAVAALQYSPQFLQAQLALLQQQSNTTATPAAVAAAALSLA
NMCSSNGGQRNSGAGVSSTSSGSNGQSMGLNLSSSQLKYPPPSTSPVVVT
TQTSANITTPLTSTASLPSVGPGNGLTKYAQLLAVIEEMGRDIRPTYTGS
RSSTERLKRGIVHARILVRECLMETERAARQ*

FI05233.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG18292-PA 281 CG18292-PA 1..281 1..281 1380 100 Plus
CG18292-PB 295 CG18292-PB 1..281 1..281 1380 100 Plus
oc-PE 539 CG12154-PE 103..331 21..225 160 27.2 Plus
oc-PD 542 CG12154-PD 106..334 21..225 160 27.2 Plus
oc-PG 542 CG12154-PG 106..334 21..225 160 27.2 Plus