Clone FI05260 Report

Search the DGRC for FI05260

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:52
Well:60
Vector:pOT2
Associated Gene/TranscriptCG11880-RA
Protein status:FI05260.pep: gold
Sequenced Size:3205

Clone Sequence Records

FI05260.complete Sequence

3205 bp assembled on 2009-06-10

GenBank Submission: BT088799.1

> FI05260.complete
GCGGGTGGTGGGCAGATTTTCTTGGGGCGATTCAGTATTATTTCGATTGT
GAAGGAGTTTACTTCGTAGAAAGTCAAGTGCTCGCCGTTTAATTAGCGCA
AGTGCAACCCCACTCGAGCTCTTTTATGTATGTATGTACATATTTATCCA
ACGAATGCAAGTGACCGACGTCCAAAGAGCAACGTACGGGATACGGAGCT
CCGACAAAGGCTTCCCGCTTTCAGTGGTCCGGTGACTTTCGCCGGAGTAG
TGACTCCGTCCCAGGAAACCAGCTAAACAAAAAGCCCCCAGCCGCTCGTA
AAAAAGTGTCATGAGACAATAAAGGAACTTTAAGAAAGAAAGGAAAAGCG
ACGAGAAGAGTGGAGCTCCTTTGTTACATCTCTGGAAGAATCGTTCGGCT
CCGAAGCAAAGTAGAGAGCGATGACGGAAAGCGTGGAGCTGATGAACAAG
TACGGCGAGCCACTGCGCTACGACCGGAACTTCACGGGACCGAGGCAGAG
GGATCGCAGCTGCACGGATGTGCCCTGCCTGCTGTTATTCGTCCTCTTCC
TGGGCGGATGGGCCTTCATAGCCCAATACGCCATCAGGAACGGCGATCTC
AACAAACTGCTGGTGCCCACGGACTCCTTTAACCGAAAGTGTGGCATGGA
CTCCGGAGTGCTGAACAAGAAAAACCTATTCTTTTTCGACTTGAATCAGT
GCATCGATCCACTTGTACCCATCACTGGATGTGACACTCCACAGGTTTGT
GTGGAGACTTGTCCCCGAGAGACGTTCGTCTGGGACACTATGAAGGACAA
ACAAAGTTTTGCGGAGCTGCATAGTCGCCTCATCTGCTTGTCGGAGGAGC
ACAAGGCGCAGATTCGCACCAAATCGGACATTCAGGATGCCATTAACCAG
AACCAGTGCGCACGCTGGTACATCAAGAGTGCTCCATTCCTCAAACGATG
CCTCTTCGAGTTCTCGCAGGGCGTGTGTGATTATATTCCCTCGTTTCTGC
TAAATGGGGGAAGGTCGAGGCGGGAGCTGCATATGTTGCCCGGAAACGCC
ACCACAGAAGTTCAAATGCAGGCCGATGTCATGTACCAGAAAATGACGGA
TGCCCAGGCTCTCGTTGTTCCACAGGCGAATGGCAAACAGACTCCAGTGG
ACGAGGAACCGATCATCCAGTGCAAGCGCAGACTCAACGAGGCTGTCATC
AAGGAGAAGATGATGCAGACCGATACGAGGCTGGCCAAGCTCGTTGGTAA
CATGGTGGCCCACTTCTACAATGGCACAAACGACGCCCAGCTTTTGGGAG
AAAAGATTGTCGAGGATCTTGTCAACTCCTGGTCGATCGTTTTGGTGGCT
TGCTTCTGCACCCTGGTAGCCTCACTGATCTACATCGCTCTAATGCGCTG
GCTCTCGGCTCCGATTCTCTGGTTCTCCATCTTCGGCGTGCTTATCGGCT
TGCTGGTGGGTATTTACTTCTCCGTAAAGCAGTACATCCACTGGGAGAAT
ACGCCTACGGTTCCCGTACACGGCTTGAATCTACACTCCACGGTCAAGAA
TGTCCTGCAAAACCAGAACACCTGGCTCTACCTGTCCATCTTCGTAGGCG
TGTGCTTCGTGGTTATCCTGTTGCTGGTAATTGTGCTAAGAAAGCGCATC
CGGATAGCGATCGCCCTAACCAAGGAGGGCAGCAAGGCGGTGAGCAGCGT
GATCAGCACCGTGTTCTTTCCCATCTTCTCCTGGATACTCTTCATTGCCG
CCATAGCGTTTGCCATTGGCGTGGGCCTGTATCTGGGCTCAATTGGCGAT
CCTTCGTTTAGAATGGTGCGACAGCTGACGAAAAGTGGCGAAGTGACCAC
CGAGGACTGCGTCTGCGAAGGTCCAGCCATCAACTACACAGTGGGCGGAT
CCTGCAAGCCAGAAGTGTTCCAGCAATATTGTAGCGTTCGGCTGACCTCA
TTTTTCCAGAACCGAAACCCTTGCTTGAACACCACCTGCAGCTTTGACTC
GATTAACAATCCAATCGAGATTAAGTGGGCCATCTTCTACAACGTCTTTG
GCTTCCTCTGGCTGAGCTTCTTCATCTCCGCCTTCAGCTACATGGTGCTG
GCCTCGACCTTCGCCCGATGGTACTGGACCTTCAAAAAGAGGGATGTGCC
CTACTTCACCCTTACAAGGGCATTCTTTCAAACTGCTGTCTACCATCTGG
GCACCGTGGCCTTTGGTTCGCTCATCCTGGCCATCGTCCGGCTGATCCGT
CTGGTGCTGGAGTACATCCACGAGAAGCTGAAGAAGTACGACAATGCGGT
GACACGAGCCATCCTCTGCTGCATGCGCTGCTTCTTCTGGTTGCTGGAGA
CCTTCCTGAAGTTCCTCAATCGGAATGCCTACATCATGTGCGCCATTCAT
GGCAAGAACTTCTGCTCCAGTGCCGCGGACTCGTTTAATCTGATTATGAG
GAACTTCCTGCGTGTGGTGACGCTGGATCAGGTCACGGACTTTTTGTTCT
TTTTGTCGAAACTGCTGCTAACCGCAGGGGCGGGGGCGTCCACCTACTAC
TTCCTGGACAATAATCCGAGCATTATTCGGCTAAATTACATAGCAGTGCC
CACCACGGTGGTGGTAATTGCCGCCTTTCTCATAACGAGCGTGTTTTTCG
GTGTGTACTCGACGGCAGTGGACACACTGTTTCTGTGCTTCCTGGAGGAC
TGCGAGCGCAACGACGGCTCACCGGAGAAGCCGTTCTTCATGTCCAAGCA
GCTAATGAAGATTCTTGGCAAGAAGAACAATCTGCCGCCGCGTCAGCGCC
GCGGAAAGTAGGAGACAGCAGTGCAAATTATAACTTTATTGAAGTAAAAC
ATATATATATATATTTATTATAGCCCAAAACGAAACGATCGGGGTTGTGA
GCGATTGCTCAACCGGCTGCAATTGGGTTCGCATTAAATGCACGCTCCTT
TGCCAATACTCTTAATCTTTAATCTAGTGTATATAATACGCCAGTATCCG
TATCCATATGTAAAGTTTTTTGTGCGGCTAGACATGTGATAGGCGCGGAC
CATAAAGACCAAAAGTAATACCATACAATAACATGTATACAGAGACACAA
AAGTACATATCTCACATTCATGAAGTTTAAGTTAACGATAATTATTATAA
TTTTCGAATTTAATAAAAATGAATTCATTGAAGACAAAAAAAAAAAAAAA
AAAAA

FI05260.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:31:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG11880-RA 3515 CG11880-RA 89..3274 1..3186 15915 99.9 Plus
CG11880-RB 3531 CG11880-RB 446..3529 103..3186 15390 99.9 Plus
CG11880-RC 3165 CG11880-RC 84..3163 107..3186 15385 99.9 Plus
CG11880-RB 3531 CG11880-RB 33..139 1..107 535 100 Plus
CG11880-RC 3165 CG11880-RC 1..74 34..107 370 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 24948700..24951144 741..3185 11775 98.8 Plus
chr3R 27901430 chr3R 24948300..24948636 410..746 1625 98.8 Plus
chr3R 27901430 chr3R 24946693..24947001 103..411 1530 99.7 Plus
chr3R 27901430 chr3R 24946279..24946385 1..107 490 97.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:14:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29125803..29128248 741..3186 12215 100 Plus
3R 32079331 3R 29125403..29125739 410..746 1685 100 Plus
3R 32079331 3R 29123796..29124104 103..411 1530 99.7 Plus
3R 32079331 3R 29123383..29123489 1..107 535 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 28866634..28869079 741..3186 12215 99.9 Plus
3R 31820162 3R 28866234..28866570 410..746 1685 100 Plus
3R 31820162 3R 28864627..28864935 103..411 1530 99.6 Plus
3R 31820162 3R 28864214..28864320 1..107 535 100 Plus
Blast to na_te.dros performed on 2019-03-16 08:44:03 has no hits.

FI05260.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:45:14 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 24946698..24947001 108..411 100 -> Plus
chr3R 24946279..24946385 1..107 97 -> Plus
chr3R 24948302..24948634 412..744 98 -> Plus
chr3R 24948704..24951144 745..3185 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:21 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
CG11880-RC 1..2391 421..2811 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:47:32 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
CG11880-RC 1..2391 421..2811 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:34:35 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
CG11880-RA 1..2391 421..2811 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:48:11 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
CG11880-RA 1..2391 421..2811 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-10 15:14:10 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
CG11880-RA 2..3186 1..3185 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:47:32 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
CG11880-RA 2..3186 1..3185 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:34:35 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
CG11880-RA 14..3195 1..3185 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:48:11 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
CG11880-RA 14..3195 1..3185 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:45:14 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29123383..29123489 1..107 100 -> Plus
3R 29123801..29124104 108..411 100 -> Plus
3R 29125405..29125737 412..744 100 -> Plus
3R 29125807..29128247 745..3185 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:45:14 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29123383..29123489 1..107 100 -> Plus
3R 29123801..29124104 108..411 100 -> Plus
3R 29125405..29125737 412..744 100 -> Plus
3R 29125807..29128247 745..3185 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:45:14 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29123383..29123489 1..107 100 -> Plus
3R 29123801..29124104 108..411 100 -> Plus
3R 29125405..29125737 412..744 100 -> Plus
3R 29125807..29128247 745..3185 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:34:35 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24949105..24949211 1..107 100 -> Plus
arm_3R 24949523..24949826 108..411 100 -> Plus
arm_3R 24951127..24951459 412..744 100 -> Plus
arm_3R 24951529..24953969 745..3185 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:23:00 Download gff for FI05260.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28864632..28864935 108..411 100 -> Plus
3R 28866236..28866568 412..744 100 -> Plus
3R 28866638..28869078 745..3185 99   Plus
3R 28864214..28864320 1..107 100 -> Plus

FI05260.pep Sequence

Translation from 420 to 2810

> FI05260.pep
MTESVELMNKYGEPLRYDRNFTGPRQRDRSCTDVPCLLLFVLFLGGWAFI
AQYAIRNGDLNKLLVPTDSFNRKCGMDSGVLNKKNLFFFDLNQCIDPLVP
ITGCDTPQVCVETCPRETFVWDTMKDKQSFAELHSRLICLSEEHKAQIRT
KSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCDYIPSFLLNGGRSR
RELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQ
CKRRLNEAVIKEKMMQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDL
VNSWSIVLVACFCTLVASLIYIALMRWLSAPILWFSIFGVLIGLLVGIYF
SVKQYIHWENTPTVPVHGLNLHSTVKNVLQNQNTWLYLSIFVGVCFVVIL
LLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAFAIG
VGLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVF
QQYCSVRLTSFFQNRNPCLNTTCSFDSINNPIEIKWAIFYNVFGFLWLSF
FISAFSYMVLASTFARWYWTFKKRDVPYFTLTRAFFQTAVYHLGTVAFGS
LILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFWLLETFLKFLN
RNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLL
TAGAGASTYYFLDNNPSIIRLNYIAVPTTVVVIAAFLITSVFFGVYSTAV
DTLFLCFLEDCERNDGSPEKPFFMSKQLMKILGKKNNLPPRQRRGK*

FI05260.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:54:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23289-PA 756 GF23289-PA 1..756 1..796 2810 69.6 Plus
Dana\GF25058-PA 690 GF25058-PA 17..657 23..792 439 22.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11645-PA 804 GG11645-PA 1..792 1..792 3744 91.5 Plus
Dere\GG15215-PA 691 GG15215-PA 175..657 273..792 438 26.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19659-PA 788 GH19659-PA 1..788 1..796 2750 65.8 Plus
Dgri\GH15940-PA 690 GH15940-PA 19..660 25..792 458 24.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:19
Subject Length Description Subject Range Query Range Score Percent Strand
Ctl2-PC 796 CG11880-PC 1..796 1..796 4188 100 Plus
Ctl2-PB 796 CG11880-PB 1..796 1..796 4188 100 Plus
Ctl2-PA 796 CG11880-PA 1..796 1..796 4188 100 Plus
Ctl1-PB 686 CG1311-PB 175..645 273..785 507 26 Plus
Ctl1-PA 691 CG1311-PA 175..650 273..785 504 25.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:54:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22273-PA 791 GI22273-PA 1..791 1..796 3163 73.9 Plus
Dmoj\GI16591-PA 681 GI16591-PA 147..648 242..792 420 25.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23911-PA 798 GL23911-PA 1..798 1..796 3455 81 Plus
Dper\GL12847-PA 692 GL12847-PA 175..658 273..792 453 26.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11255-PB 798 GA11255-PB 1..798 1..796 3454 81 Plus
Dpse\GA12051-PA 692 GA12051-PA 175..658 273..792 461 26.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12767-PA 802 GM12767-PA 314..802 308..796 2543 98.8 Plus
Dsec\GM12767-PA 802 GM12767-PA 1..238 1..238 1247 93.7 Plus
Dsec\GM14646-PA 691 GM14646-PA 175..657 273..792 443 25.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21415-PA 796 GD21415-PA 1..796 1..796 4169 97.5 Plus
Dsim\GD13831-PA 691 GD13831-PA 175..657 273..792 445 25.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24066-PA 791 GJ24066-PA 1..791 1..796 3076 74.3 Plus
Dvir\GJ12843-PA 694 GJ12843-PA 160..661 242..792 433 26.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11890-PA 799 GK11890-PA 1..798 1..794 3284 76.7 Plus
Dwil\GK10555-PA 681 GK10555-PA 17..647 25..792 389 22.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23835-PA 785 GE23835-PA 1..785 1..796 3687 90.5 Plus
Dyak\GE21434-PA 691 GE21434-PA 175..657 273..792 442 25.8 Plus

FI05260.hyp Sequence

Translation from 420 to 2810

> FI05260.hyp
MTESVELMNKYGEPLRYDRNFTGPRQRDRSCTDVPCLLLFVLFLGGWAFI
AQYAIRNGDLNKLLVPTDSFNRKCGMDSGVLNKKNLFFFDLNQCIDPLVP
ITGCDTPQVCVETCPRETFVWDTMKDKQSFAELHSRLICLSEEHKAQIRT
KSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCDYIPSFLLNGGRSR
RELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDEEPIIQ
CKRRLNEAVIKEKMMQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDL
VNSWSIVLVACFCTLVASLIYIALMRWLSAPILWFSIFGVLIGLLVGIYF
SVKQYIHWENTPTVPVHGLNLHSTVKNVLQNQNTWLYLSIFVGVCFVVIL
LLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAFAIG
VGLYLGSIGDPSFRMVRQLTKSGEVTTEDCVCEGPAINYTVGGSCKPEVF
QQYCSVRLTSFFQNRNPCLNTTCSFDSINNPIEIKWAIFYNVFGFLWLSF
FISAFSYMVLASTFARWYWTFKKRDVPYFTLTRAFFQTAVYHLGTVAFGS
LILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCFFWLLETFLKFLN
RNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLL
TAGAGASTYYFLDNNPSIIRLNYIAVPTTVVVIAAFLITSVFFGVYSTAV
DTLFLCFLEDCERNDGSPEKPFFMSKQLMKILGKKNNLPPRQRRGK*

FI05260.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11880-PC 796 CG11880-PC 1..796 1..796 4188 100 Plus
CG11880-PB 796 CG11880-PB 1..796 1..796 4188 100 Plus
CG11880-PA 796 CG11880-PA 1..796 1..796 4188 100 Plus
CG1311-PB 686 CG1311-PB 175..645 273..785 507 26 Plus
CG1311-PA 691 CG1311-PA 175..650 273..785 504 25.6 Plus