BDGP Sequence Production Resources |
Search the DGRC for FI05284
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 52 |
Well: | 84 |
Vector: | pOT2 |
Associated Gene/Transcript | Apc2-RA |
Protein status: | FI05284.pep: gold |
Sequenced Size: | 3543 |
Gene | Date | Evidence |
---|---|---|
Apc2 | 2008-08-15 | Release 5.9 accounting |
Apc2 | 2008-12-18 | 5.12 accounting |
3543 bp assembled on 2008-07-17
GenBank Submission: BT044211.1
> FI05284.complete AGCGCTGAGCCTGCGCGCTTGGAAAATGGCTTAAACGCAGGCCATCTCAA ACAAAGATCGAGGATCTCAGATCAGAAGGAACTACCTGTTGAAGCGACCG TGCAACAGGACTCATCCAGAAGCAAAGCTGCAAAGGTTTATTCCCAGAAT CCCTGGTATCCGAATGCACTAATAGGTGAGGATACATTCAAAGTAATGAC GCTGAACGAGAGCGACGCTACTCGCCTGGAGCTGACGCGCAACTTCCTGG AACTGTCTCGAAATCCGGAAACATGCACCGCCCTGCGCAGCTCGGACTGT ATCCAGCTTCTGGTGCAGATTCTGCACGCCAACGACGAAGGCCTCTCCAC GGCGAAAAAGTACGCCAGCCAGGCGCTGCACAACATCGTCCACAATAATC CGGAGGAGAAGGAGCGCCAGCGGGAGGTGAAGATGCTGCGCCTGCTGGAC CAGATCCTCGACTACTGTAACTTTCTGCACACCCAGTTGCAGAGCGGCGG TGAGGCTATCGCAGATGATGAAGATCGTCATCCGCTGGCGGCTATGAAGC TCCTGATGAAAGCCAGTTTCGACGAGGAGCACCGCCAGACTATGTGCGAA CTGGGAGCCCTCAAGGCGATTCCCAATTTGGTCCACCTTGATCATGCGGT CCATGGACCGGCTGCCGGTAGGGAACAGTGCAACGCCCTCAGGAGCTACG GCCTCATGGCCCTCACGAATCTCACCTTCGGAGACGAGAACGTCCATAAC AAATCGTATCTGTGCGGTCAGCGACAGTTCATGGAAGTGGTCATTGCTCA ATTGAACACGGCTCCGGATGAACTGCTACAGGTTCTTGCTGGTGTGCTTC GCAATCTTTCGTGGCGCGCGGACAAACACATGAAGACTATCTTTAACGAG CTGGGTACTGTGACCTCCTTGGCTCGAGCAGCCATGCAAAACAAGAACGA GAACACTCTCAAGGCCATACTTTCAGCCCTTTGGAATCTCTCAGCGCACT GCAGCACCAACAAGGCGGAGTTTTGTGCAGTAGACGGAGCACTGGCATTT TTGGTCGGAATGCTTAGCTACGAGGGTCCGAGTAAAACTCTTAAGATCAT CGAAAATGCAGGCGGCATTCTTCGAAATGTATCGAGCCATATTGCGGTGT GTGAGCCGTACCGACAAATCCTAAGACGGTACAATTGCCTTGCCATTCTG TTGCAACAGTTGAAATCGGAGAGCCTAACCGTGGTAAGCAACTCCTGCGG AACTCTGTGGAATCTCTCGGCGCGCTGTCCCGAGGACCAGCAATACCTCA TTGACCACAATGCCATCCCGCTCTTGCGGGCCCTAATCAGCTCCAAGAAC TCCATGATTGCGGAGGGCAGTGCCTCGGCTTTGAAAAACCTAGTTAATTT CAGGGCCACTCAGGAGCTTATGCCCAATGGAGATGGTGGGTCACTGCCAC TAGACAAGGAAGCTGGCCATGGAGGTACGCTGCCACGGAGATTCAGCTCA CTGCGCCTAAGCTCAAATCCCACGGGATCGCTTAAGAAAGTGCGACCCTC AACAGTCAGCACAACTGGCTTTCTGAACAGAAAATGTGAGAGCCGAGAGT CCATTTACTCGGGCAAATCCGATTCCACTAAATACTCAACCAAGTCGGAG GGAGCGAAGAATCCCTTCGAAATTGTGACACCCACTGAAGAGCAGCCCAT TGACTACTCCATGAAGTACATGGAGCACAAACCCAATAGCAGTAAGACCT TTGAGATCGACTTGGATCAGCCAACGGATTTCAGTGCTAGATATAAGGAG AGACGATCCGCTCAGACGGCACAGCCGGAGCTGAAGTCGGAGACCAATGA GATTAGAAGTAAGGAGTTGCAACTGACAAAGTCCTCCTCGGCCACGGAGC TGCGCAATAGTCCTGGCCTGGTGGCGGTTTCAGCAGCTAAGCAGAAAATT GCCACCGAAACGGAGACGGAAACGGCAGAGCGACCAATAAACTACTGTGA AGAAGGGACTCCCGGCAGCTTCAGTCGCTTCGACTCGCTCAACAGCCTCA CAGAGAAACCGGAGAAATGTATGCCGCCAAAAACTCCAACGAAAACTGCG GTTCTCCCGGTGCACGTTGACGGAAATACGCCTCAAAACATCGATTCCGC ACTAGAAACTCCATTAATGTTTTCGCGTCGCAGCTCTATGGACTCATTGG TTGGCGACGACGAAACGGTTGCCTGCGAGGACAATGGATCCGTGATCAGT GAATACAGCCGGATGCAGAGTGGTGTTATTTCCCCCTCAGAGCTGCCCGA TTCACCCACCCAGAGTATGCCTCAATCTCCGAGAAGGGACAGAAAAGTGT CCACTCAAAATAACTTGGACACACCTGAACAGAAGCCCAGTACTGTGTTT GAGGACAAGTTGAACAGATTCCACGTGGAGCACACGCCTGCTGCCTTCTC CTGCGCCACCAGTCTAAGTAATCTGAGCATGATGGACGACTCTAATGCAA ACGCTATTCGAGGACAGCGTGGAAATGACATCAACGGCAATGGGGATGCT CCTCGCAGCTATTGCACAGAGGACACTACTGCCGTGCTTTCCAAAGCGCC AAGCAATAGTGATCTGTCCATTTTGTCCATCCCGAATGATCTAAATGCGA ATGAAGCGCAGCCAGTGCCTGCTCCGCGAGCTGATGTTACCGGAATGGAC ACTCGGATGCCGGCAGAAGATGCAATCTCTAAGATGCGCTGCGGTGGCAA TGCATTGCCCAGTTATCTGCCAGTGTCGGATGAAATGAGCAAGTACTATG TCGAGGACAGTCCCTGCACGTTTTCGGTCATCTCGGGACTATCCCATCTC ACTGTTGGCTCTGCTAAGGCTGGGCCTGTTCTGAAGCTGCCAATGAGGAC TGCAGAAGAGGCTCAGGCACCCAAACTTCCTCCCAGACGTAGTGCCGTTC AAGGAGATGCGGAGCCACGCTTACCGCCGAAGAAAAGCGACTCACTGAGC TCATTGTCCATGGACTCGGATGACGACTGTAATCTTCTAAGTCAGGCCAT TGCTGCGGGAAGTTGTCGACCTCAGCCCAGCGGTGCCAGTACCAGCTCCA GCCTGGCGAACGCTAGTACCAGCACTCTATGCAGGGAAAATGGGCAGTCA AAGAAGCAGGTGGAGCATGGCGATAAGCCGAACTACAGCTCAGATGACTC GCTAGACGACGACGACGATGATGCACGGTCCAAGTCGCTATTTGAGCAGT GCATTCTGAGCGGCATGCATAAGTCCAACGACGCCTTGGAGTCGGAGGGT GAGCCGCCGGGGCAGCGCCAGGAGATCAGTGCCCGGGATCGATTTGTCAG TAACCAGGTGCGCCAGATTGAGTCCATGTTGGCTGGGCGTCAGCACTAGA AGCGGATGGTTGGTTAATTGAGAAGCGCATGCATTTGTTTAGTGGCTTTT AATCTTGTCTACGCAATAATATTCTCACGGTCTCAATTTTCCTATAGTTC AGATTAAAAATTTGCACTTAAATTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Apc2-RA | 4158 | Apc2-RA | 78..3604 | 1..3527 | 17635 | 100 | Plus |
Apc2.a | 4032 | Apc2.a | 436..3478 | 485..3527 | 15215 | 100 | Plus |
Apc2.a | 4032 | Apc2.a | 12..444 | 1..433 | 2135 | 99.5 | Plus |
CG5510-RA | 1690 | CG5510-RA | 1497..1690 | 3527..3334 | 970 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19988200..19990417 | 829..3046 | 10865 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 19987309..19988141 | 1..833 | 4165 | 100 | Plus |
chr3R | 27901430 | chr3R | 19990612..19991093 | 3044..3525 | 2410 | 100 | Plus |
chr3R | 27901430 | chr3R | 24661999..24662913 | 1290..370 | 880 | 73.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24164870..24167087 | 829..3046 | 11090 | 100 | Plus |
3R | 32079331 | 3R | 24163979..24164811 | 1..833 | 4165 | 100 | Plus |
3R | 32079331 | 3R | 24167282..24167765 | 3044..3527 | 2420 | 100 | Plus |
3R | 32079331 | 3R | 28838992..28839906 | 1290..370 | 895 | 73.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23905701..23907918 | 829..3046 | 11090 | 100 | Plus |
3R | 31820162 | 3R | 23904810..23905642 | 1..833 | 4165 | 100 | Plus |
3R | 31820162 | 3R | 23908113..23908596 | 3044..3527 | 2420 | 100 | Plus |
3R | 31820162 | 3R | 28579823..28580164 | 1290..949 | 690 | 80.1 | Minus |
3R | 31820162 | 3R | 28580568..28580677 | 539..430 | 190 | 78.1 | Minus |
3R | 31820162 | 3R | 28580448..28580554 | 659..553 | 175 | 77.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19987309..19988139 | 1..831 | 100 | -> | Plus |
chr3R | 19988203..19990416 | 832..3045 | 99 | -> | Plus |
chr3R | 19990614..19991093 | 3046..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 1..3204 | 196..3399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 1..3204 | 196..3399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 1..3204 | 196..3399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 1..3204 | 196..3399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 1..3204 | 196..3399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 12..3536 | 1..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 12..3536 | 1..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 14..3538 | 1..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 12..3536 | 1..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Apc2-RA | 14..3538 | 1..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24163979..24164809 | 1..831 | 100 | -> | Plus |
3R | 24164873..24167086 | 832..3045 | 100 | -> | Plus |
3R | 24167284..24167763 | 3046..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24163979..24164809 | 1..831 | 100 | -> | Plus |
3R | 24164873..24167086 | 832..3045 | 100 | -> | Plus |
3R | 24167284..24167763 | 3046..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24163979..24164809 | 1..831 | 100 | -> | Plus |
3R | 24164873..24167086 | 832..3045 | 100 | -> | Plus |
3R | 24167284..24167763 | 3046..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19989701..19990531 | 1..831 | 100 | -> | Plus |
arm_3R | 19990595..19992808 | 832..3045 | 100 | -> | Plus |
arm_3R | 19993006..19993485 | 3046..3525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23904810..23905640 | 1..831 | 100 | -> | Plus |
3R | 23905704..23907917 | 832..3045 | 100 | -> | Plus |
3R | 23908115..23908594 | 3046..3525 | 100 | Plus |
Translation from 0 to 3398
> FI05284.pep SAEPARLENGLNAGHLKQRSRISDQKELPVEATVQQDSSRSKAAKVYSQN PWYPNALIGEDTFKVMTLNESDATRLELTRNFLELSRNPETCTALRSSDC IQLLVQILHANDEGLSTAKKYASQALHNIVHNNPEEKERQREVKMLRLLD QILDYCNFLHTQLQSGGEAIADDEDRHPLAAMKLLMKASFDEEHRQTMCE LGALKAIPNLVHLDHAVHGPAAGREQCNALRSYGLMALTNLTFGDENVHN KSYLCGQRQFMEVVIAQLNTAPDELLQVLAGVLRNLSWRADKHMKTIFNE LGTVTSLARAAMQNKNENTLKAILSALWNLSAHCSTNKAEFCAVDGALAF LVGMLSYEGPSKTLKIIENAGGILRNVSSHIAVCEPYRQILRRYNCLAIL LQQLKSESLTVVSNSCGTLWNLSARCPEDQQYLIDHNAIPLLRALISSKN SMIAEGSASALKNLVNFRATQELMPNGDGGSLPLDKEAGHGGTLPRRFSS LRLSSNPTGSLKKVRPSTVSTTGFLNRKCESRESIYSGKSDSTKYSTKSE GAKNPFEIVTPTEEQPIDYSMKYMEHKPNSSKTFEIDLDQPTDFSARYKE RRSAQTAQPELKSETNEIRSKELQLTKSSSATELRNSPGLVAVSAAKQKI ATETETETAERPINYCEEGTPGSFSRFDSLNSLTEKPEKCMPPKTPTKTA VLPVHVDGNTPQNIDSALETPLMFSRRSSMDSLVGDDETVACEDNGSVIS EYSRMQSGVISPSELPDSPTQSMPQSPRRDRKVSTQNNLDTPEQKPSTVF EDKLNRFHVEHTPAAFSCATSLSNLSMMDDSNANAIRGQRGNDINGNGDA PRSYCTEDTTAVLSKAPSNSDLSILSIPNDLNANEAQPVPAPRADVTGMD TRMPAEDAISKMRCGGNALPSYLPVSDEMSKYYVEDSPCTFSVISGLSHL TVGSAKAGPVLKLPMRTAEEAQAPKLPPRRSAVQGDAEPRLPPKKSDSLS SLSMDSDDDCNLLSQAIAAGSCRPQPSGASTSSSLANASTSTLCRENGQS KKQVEHGDKPNYSSDDSLDDDDDDARSKSLFEQCILSGMHKSNDALESEG EPPGQRQEISARDRFVSNQVRQIESMLAGRQH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16111-PA | 1054 | GF16111-PA | 1..1046 | 66..1132 | 4548 | 85 | Plus |
Dana\GF16423-PA | 2409 | GF16423-PA | 239..1413 | 76..1094 | 2463 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11262-PA | 1067 | GG11262-PA | 1..1067 | 66..1132 | 5590 | 97.6 | Plus |
Dere\GG12051-PA | 2416 | GG12051-PA | 239..1423 | 76..1094 | 2420 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18502-PA | 1099 | GH18502-PA | 1..1075 | 66..1128 | 3166 | 64.1 | Plus |
Dgri\GH18063-PA | 2551 | GH18063-PA | 274..1490 | 76..1091 | 2210 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Apc2-PC | 1067 | CG6193-PC | 1..1067 | 66..1132 | 5480 | 100 | Plus |
Apc2-PA | 1067 | CG6193-PA | 1..1067 | 66..1132 | 5480 | 100 | Plus |
Apc2-PB | 1047 | CG6193-PB | 1..1047 | 66..1132 | 5343 | 98.1 | Plus |
Apc-PC | 1597 | CG1451-PC | 239..1446 | 76..1126 | 2494 | 48.9 | Plus |
Apc-PB | 2417 | CG1451-PB | 239..1446 | 76..1126 | 2494 | 48.9 | Plus |
Apc-PA | 2417 | CG1451-PA | 239..1446 | 76..1126 | 2494 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24175-PA | 1054 | GI24175-PA | 1..1032 | 66..1128 | 3022 | 63.8 | Plus |
Dmoj\GI10524-PA | 2520 | GI10524-PA | 263..653 | 76..468 | 1634 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23412-PA | 780 | GL23412-PA | 1..778 | 66..835 | 3427 | 84.4 | Plus |
Dper\GL23332-PA | 2381 | GL23332-PA | 243..1339 | 76..1091 | 1910 | 44.7 | Plus |
Dper\GL23413-PA | 237 | GL23413-PA | 1..221 | 912..1129 | 686 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19428-PA | 1088 | GA19428-PA | 1..1076 | 66..1132 | 4377 | 82.6 | Plus |
Dpse\GA13041-PA | 2440 | GA13041-PA | 243..1401 | 76..1091 | 2368 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26568-PA | 1067 | GM26568-PA | 1..1067 | 66..1132 | 5643 | 98.6 | Plus |
Dsec\GM12280-PA | 2420 | GM12280-PA | 239..1418 | 76..1094 | 2451 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21072-PA | 1067 | GD21072-PA | 1..1067 | 66..1132 | 5641 | 98.7 | Plus |
Dsim\GD18013-PA | 2135 | GD18013-PA | 239..1416 | 76..1094 | 2465 | 48.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14208-PA | 1063 | GJ14208-PA | 1..1041 | 66..1128 | 3215 | 65.6 | Plus |
Dvir\GJ24175-PA | 2504 | GJ24175-PA | 241..1430 | 76..1094 | 2450 | 49.4 | Plus |
Translation from 0 to 3398
> FI05284.hyp SAEPARLENGLNAGHLKQRSRISDQKELPVEATVQQDSSRSKAAKVYSQN PWYPNALIGEDTFKVMTLNESDATRLELTRNFLELSRNPETCTALRSSDC IQLLVQILHANDEGLSTAKKYASQALHNIVHNNPEEKERQREVKMLRLLD QILDYCNFLHTQLQSGGEAIADDEDRHPLAAMKLLMKASFDEEHRQTMCE LGALKAIPNLVHLDHAVHGPAAGREQCNALRSYGLMALTNLTFGDENVHN KSYLCGQRQFMEVVIAQLNTAPDELLQVLAGVLRNLSWRADKHMKTIFNE LGTVTSLARAAMQNKNENTLKAILSALWNLSAHCSTNKAEFCAVDGALAF LVGMLSYEGPSKTLKIIENAGGILRNVSSHIAVCEPYRQILRRYNCLAIL LQQLKSESLTVVSNSCGTLWNLSARCPEDQQYLIDHNAIPLLRALISSKN SMIAEGSASALKNLVNFRATQELMPNGDGGSLPLDKEAGHGGTLPRRFSS LRLSSNPTGSLKKVRPSTVSTTGFLNRKCESRESIYSGKSDSTKYSTKSE GAKNPFEIVTPTEEQPIDYSMKYMEHKPNSSKTFEIDLDQPTDFSARYKE RRSAQTAQPELKSETNEIRSKELQLTKSSSATELRNSPGLVAVSAAKQKI ATETETETAERPINYCEEGTPGSFSRFDSLNSLTEKPEKCMPPKTPTKTA VLPVHVDGNTPQNIDSALETPLMFSRRSSMDSLVGDDETVACEDNGSVIS EYSRMQSGVISPSELPDSPTQSMPQSPRRDRKVSTQNNLDTPEQKPSTVF EDKLNRFHVEHTPAAFSCATSLSNLSMMDDSNANAIRGQRGNDINGNGDA PRSYCTEDTTAVLSKAPSNSDLSILSIPNDLNANEAQPVPAPRADVTGMD TRMPAEDAISKMRCGGNALPSYLPVSDEMSKYYVEDSPCTFSVISGLSHL TVGSAKAGPVLKLPMRTAEEAQAPKLPPRRSAVQGDAEPRLPPKKSDSLS SLSMDSDDDCNLLSQAIAAGSCRPQPSGASTSSSLANASTSTLCRENGQS KKQVEHGDKPNYSSDDSLDDDDDDARSKSLFEQCILSGMHKSNDALESEG EPPGQRQEISARDRFVSNQVRQIESMLAGRQH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Apc2-PA | 1067 | CG6193-PA | 1..1067 | 66..1132 | 5480 | 100 | Plus |
Apc-PB | 2417 | CG1451-PB | 239..1446 | 76..1126 | 2494 | 48.9 | Plus |
Apc-PA | 2417 | CG1451-PA | 239..1446 | 76..1126 | 2494 | 48.9 | Plus |