BDGP Sequence Production Resources |
Search the DGRC for FI05303
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 53 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | Pal1-RA |
Protein status: | FI05303.pep: gold |
Sequenced Size: | 2641 |
Gene | Date | Evidence |
---|---|---|
CG12130 | 2008-12-18 | 5.12 accounting |
2641 bp assembled on 2008-11-04
GenBank Submission: BT050472.1
> FI05303.complete CCTGCCGGGTTTCTTGGCGGCGTTTATCCATTACCGTCAGTTCCTGCTTG TTGACCAGAATTTTGTCGGCCAACTCCTCGGTCTTGATTTGCTAAAAACA CGGAAGTAAACAAAAGTGAAGAAGTGAGACCCGAAAACGTACTAACGCCT CTTAAACAGCTGTTCGATCAGGGGCGCATCATAGAAGAGGGATTCATTTT ACATGCTAACTGTATGAGGAAACATTTAACTGTTAACCTGTTAATATTCT TCCTATTAGCGCTTGTAACCAAATATGGTTACATTATAGCACAGCATAAC TGCATAACATTGAGCCCCTGTAAACACACATTCTACCTGCGCCGCTGAAC AAATAACATCTCAATCGCAAGCAAAGATGGCCGCGTCATAAGTTGATTTG TAGTTCCAAAACGAGACGAGACGTTTGTTTACGAGCACAACTACGCCGGA CTGGATCTCCGCCAGCATTCGGGCAGCTATATATATACATTCGAAGGGAC ACCAAAGCAATGAAATCCACCGACAGCGCCAAGTGCCTGGGCAGCAAGTC CTTGGCAATCTGTTGCCTGCTCCTCCACCTCCTACTCTGCATTAGACCAG CAGTGTCGCAGACTCAAAGTCCACAGCGTTATCTGCATAATGTGGACAGC AATAGCAACAACAACGAACGCCTGCACCAGATACTCAAGGGATCCGGAGC AGGATCGGGAGCCACGCAGCTCAACTGGCCACAGCCTCCGAAGCAAACTG TCCCCAACGTCAAGACTGAGCTGGCCAAGCTAAACAACACTTACGTTTAC CAGAACGCCTGGCCGGCAAACAATGTGAAACTGGGTGCAGTGACAGCTGT AAGTTTCGACAAGGCCGGCAACGTGGTAATCTTCCATCGCGTGAATCGCG TCTGGGGACAGACCACATTTGATAACAGGAACCAGTACCAGGAGAAGTAC CGCGGGCCCATCAGGGAGAGCACCATCCTGGCACTGGAGCCCGCAACAGG CAAAGTGCAATACGACTGGGGCAAGAACTTTTTTTACATGCCACATGGCC TGACCGTGGACCCCGAAGACAACGTTTGGTTAACAGACGTCGCCATGCAC CAGGTTTTTAAGTTCCCGCCCCGTGGAGGCGATGGAAAACCAGCGTTGAC TCTGGGCGATGCCTTCCAGCCCGGTTCAGGACGCAAATTCTGCAAGCCCA CCTCGGTGGCGGTGTTGGATAATGGGGACTTCTTCGTGGCGGATGGATAC TGCAATGCTCGCATCCTTAAGTACTCACGAAAAGGCGAATTGATCCTCTT CTGGGGACAGAACACCTTCTCCGGCATATCCTACGACGTTGCGCCCCAGA ACTTCTTCGCGATTCCCCACGCTCTGACTCTCGTCCCGGAGTTGCAGTTA CTCTGCGCAGCTGATAGGGAGAATGGGCGCGTACAGTGCTTCCTCTCGAG CAACGGCACCTTTCACTCACAGTACCACAACCAGCTGATAGGGGACCGCC TCTTCAGCATGGCTTACACCCCGGCAGCGGGTGGGCAGCTGGTCATTGTC AACGGACCAACCGCCGAGTTAGGCATCCATCCTGAGCATTATAACGAGGT GCACGGTTTCGTGCTAAGCATGCGCAGCAAGCAACTGGTGTCTAAGTTCG GCCCCAATAACCTGCAGTTCCAGAACCCGCACGACGTGGCCGTTACAGCC GACGGCAATGAGATCTACGTGGCCGAGCTGAATCCAATGCGTATCCACAA GTTCGTCCACCGATCTCTGGCCAAGCCAATGTCCTTGTCGGCCAGCAAGG ACTCTAGGGACAGCGCTATTAGCCAAGCTGTGGGAGGGGACCAGGTTCCC GCAGTGGCTGTGCACCACCCGAGCGGCAAAGCAATCCTGGTGGCTTCGCT CATGCTCCTTTTCGCCGGCTCTACCTTTGCCTTGGCTTTGATCTTTGCGC GGCGGAGGAAACGAGGTTGCCTGCCTTTCGGAGCACGCGGTCGTCGCCAC GCGTGGGAGAAAAGCGATGGCTTCAAGCTGGGCGGACTTCTCGATCGGGA TCGCAACGGATTCGAGAAGCTGGACCAGCAGGCCAGCGACGAGGAGCAGG AGACGAAGACACTGGCGAGTGCCCAGTACGCCTAGGCGAAGGACCAAGAC TTACGCAGCTAACAAAGCATTCCTAGTTCTAACTACCTGTACCTCATTGA AATACCGACTTAGTTTTACGCGAGCTATGTATATGTGTGTACTTTAGGTA ACTTTATTTACCTTCCTTGTGGTGCATATCGCAGAGAATTCCGATCGTGG TGTATTTCTAGTTGATTTATTGAGCCGTTTGTTCAATGTATTTTAAACAG CTTATTTATGGAAACTTCTTTTGGAGAACCGACTATGCGATTTTTTTCCG GTTACTTATATTTATTCTTTATTTAAAAGAATACATTTTTAAAACGCATG CCTCTAAAGAGCTCGAAAATATCTGAAATATTGTAAGTGCCACAGAGTCC AATGACTTGACCACATCCTTTAAATTAATTTTTTTTTTCGAATTAAATCG AAGTTCTCAGCGAATGCGCCTCATATATTGCGATTAATTTGCCAAAAAGA ATATAGTCGTATGAATCTGTCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12130-RA | 2621 | CG12130-RA | 1..2621 | 1..2621 | 13105 | 100 | Plus |
CG12130-RB | 2690 | CG12130-RB | 1..1967 | 1..1967 | 9835 | 100 | Plus |
CG12130-RB | 2690 | CG12130-RB | 2035..2690 | 1966..2621 | 3280 | 100 | Plus |
CG15863-RA | 785 | CG15863-RA | 1..187 | 981..795 | 935 | 100 | Minus |
CG15863-RA | 785 | CG15863-RA | 260..345 | 86..1 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5850693..5851352 | 1964..2621 | 3220 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 5849060..5849562 | 1031..1533 | 2515 | 100 | Plus |
chr2R | 21145070 | chr2R | 5849722..5850159 | 1530..1967 | 2160 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 5847477..5847830 | 258..611 | 1755 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 5848292..5848532 | 790..1030 | 1205 | 100 | Plus |
chr2R | 21145070 | chr2R | 5848052..5848232 | 609..789 | 890 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 5847229..5847400 | 86..257 | 860 | 100 | Plus |
chr2R | 21145070 | chr2R | 5847077..5847162 | 1..86 | 415 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9963196..9963854 | 1964..2622 | 3295 | 100 | Plus |
2R | 25286936 | 2R | 9961563..9962065 | 1031..1533 | 2515 | 100 | Plus |
2R | 25286936 | 2R | 9962225..9962662 | 1530..1967 | 2190 | 100 | Plus |
2R | 25286936 | 2R | 9959949..9960302 | 258..611 | 1770 | 100 | Plus |
2R | 25286936 | 2R | 9960763..9961003 | 790..1030 | 1205 | 100 | Plus |
2R | 25286936 | 2R | 9960523..9960703 | 609..789 | 905 | 100 | Plus |
2R | 25286936 | 2R | 9959701..9959872 | 86..257 | 860 | 100 | Plus |
2R | 25286936 | 2R | 9959549..9959634 | 1..86 | 430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9964395..9965053 | 1964..2622 | 3295 | 100 | Plus |
2R | 25260384 | 2R | 9962762..9963264 | 1031..1533 | 2515 | 100 | Plus |
2R | 25260384 | 2R | 9963424..9963861 | 1530..1967 | 2190 | 100 | Plus |
2R | 25260384 | 2R | 9961148..9961501 | 258..611 | 1770 | 100 | Plus |
2R | 25260384 | 2R | 9961962..9962202 | 790..1030 | 1205 | 100 | Plus |
2R | 25260384 | 2R | 9961722..9961902 | 609..789 | 905 | 100 | Plus |
2R | 25260384 | 2R | 9960900..9961071 | 86..257 | 860 | 100 | Plus |
2R | 25260384 | 2R | 9960748..9960833 | 1..86 | 430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5848292..5848532 | 790..1030 | 100 | -> | Plus |
chr2R | 5847077..5847162 | 1..86 | 98 | -> | Plus |
chr2R | 5847230..5847400 | 87..257 | 100 | -> | Plus |
chr2R | 5847477..5847830 | 258..611 | 99 | -> | Plus |
chr2R | 5848055..5848232 | 612..789 | 99 | -> | Plus |
chr2R | 5849060..5849559 | 1031..1530 | 100 | -> | Plus |
chr2R | 5849723..5850157 | 1531..1965 | 99 | -> | Plus |
chr2R | 5850695..5851352 | 1966..2621 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12130-RA | 1..1626 | 510..2135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pal1-RD | 1..1626 | 510..2135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pal1-RD | 1..1626 | 510..2135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12130-RA | 1..2621 | 1..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12130-RA | 1..2621 | 1..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pal1-RA | 1..2621 | 1..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12130-RA | 1..2621 | 1..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pal1-RA | 1..2621 | 1..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9960763..9961003 | 790..1030 | 100 | -> | Plus |
2R | 9959549..9959634 | 1..86 | 100 | -> | Plus |
2R | 9959702..9959872 | 87..257 | 100 | -> | Plus |
2R | 9959949..9960302 | 258..611 | 100 | -> | Plus |
2R | 9960526..9960703 | 612..789 | 100 | -> | Plus |
2R | 9961563..9962062 | 1031..1530 | 100 | -> | Plus |
2R | 9962226..9962660 | 1531..1965 | 100 | -> | Plus |
2R | 9963198..9963853 | 1966..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9960763..9961003 | 790..1030 | 100 | -> | Plus |
2R | 9959549..9959634 | 1..86 | 100 | -> | Plus |
2R | 9959702..9959872 | 87..257 | 100 | -> | Plus |
2R | 9959949..9960302 | 258..611 | 100 | -> | Plus |
2R | 9960526..9960703 | 612..789 | 100 | -> | Plus |
2R | 9961563..9962062 | 1031..1530 | 100 | -> | Plus |
2R | 9962226..9962660 | 1531..1965 | 100 | -> | Plus |
2R | 9963198..9963853 | 1966..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9960763..9961003 | 790..1030 | 100 | -> | Plus |
2R | 9959549..9959634 | 1..86 | 100 | -> | Plus |
2R | 9959702..9959872 | 87..257 | 100 | -> | Plus |
2R | 9959949..9960302 | 258..611 | 100 | -> | Plus |
2R | 9960526..9960703 | 612..789 | 100 | -> | Plus |
2R | 9961563..9962062 | 1031..1530 | 100 | -> | Plus |
2R | 9962226..9962660 | 1531..1965 | 100 | -> | Plus |
2R | 9963198..9963853 | 1966..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5847054..5847139 | 1..86 | 100 | -> | Plus |
arm_2R | 5847207..5847377 | 87..257 | 100 | -> | Plus |
arm_2R | 5847454..5847807 | 258..611 | 100 | -> | Plus |
arm_2R | 5848031..5848208 | 612..789 | 100 | -> | Plus |
arm_2R | 5848268..5848508 | 790..1030 | 100 | -> | Plus |
arm_2R | 5849068..5849567 | 1031..1530 | 100 | -> | Plus |
arm_2R | 5849731..5850165 | 1531..1965 | 100 | -> | Plus |
arm_2R | 5850703..5851358 | 1966..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9961148..9961501 | 258..611 | 100 | -> | Plus |
2R | 9961725..9961902 | 612..789 | 100 | -> | Plus |
2R | 9961962..9962202 | 790..1030 | 100 | -> | Plus |
2R | 9962762..9963261 | 1031..1530 | 100 | -> | Plus |
2R | 9963425..9963859 | 1531..1965 | 100 | -> | Plus |
2R | 9964397..9965052 | 1966..2621 | 100 | Plus | |
2R | 9960748..9960833 | 1..86 | 100 | -> | Plus |
2R | 9960901..9961071 | 87..257 | 100 | -> | Plus |
Translation from 509 to 2134
> FI05303.pep MKSTDSAKCLGSKSLAICCLLLHLLLCIRPAVSQTQSPQRYLHNVDSNSN NNERLHQILKGSGAGSGATQLNWPQPPKQTVPNVKTELAKLNNTYVYQNA WPANNVKLGAVTAVSFDKAGNVVIFHRVNRVWGQTTFDNRNQYQEKYRGP IRESTILALEPATGKVQYDWGKNFFYMPHGLTVDPEDNVWLTDVAMHQVF KFPPRGGDGKPALTLGDAFQPGSGRKFCKPTSVAVLDNGDFFVADGYCNA RILKYSRKGELILFWGQNTFSGISYDVAPQNFFAIPHALTLVPELQLLCA ADRENGRVQCFLSSNGTFHSQYHNQLIGDRLFSMAYTPAAGGQLVIVNGP TAELGIHPEHYNEVHGFVLSMRSKQLVSKFGPNNLQFQNPHDVAVTADGN EIYVAELNPMRIHKFVHRSLAKPMSLSASKDSRDSAISQAVGGDQVPAVA VHHPSGKAILVASLMLLFAGSTFALALIFARRRKRGCLPFGARGRRHAWE KSDGFKLGGLLDRDRNGFEKLDQQASDEEQETKTLASAQYA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13565-PA | 539 | GF13565-PA | 31..539 | 29..541 | 2299 | 82.7 | Plus |
Dana\GF13074-PA | 413 | GF13074-PA | 95..398 | 83..407 | 613 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24122-PA | 541 | GG24122-PA | 1..541 | 1..541 | 2643 | 91.7 | Plus |
Dere\GG22877-PA | 407 | GG22877-PA | 4..392 | 15..407 | 631 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21446-PA | 538 | GH21446-PA | 20..538 | 15..541 | 2074 | 74.1 | Plus |
Dgri\GH20345-PA | 389 | GH20345-PA | 88..373 | 101..406 | 609 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pal1-PD | 541 | CG12130-PD | 1..541 | 1..541 | 2862 | 100 | Plus |
Pal1-PA | 541 | CG12130-PA | 1..541 | 1..541 | 2862 | 100 | Plus |
Pal1-PC | 511 | CG12130-PC | 1..486 | 1..486 | 2570 | 100 | Plus |
Pal2-PE | 406 | CG5472-PE | 63..391 | 74..407 | 606 | 39.7 | Plus |
Pal2-PD | 406 | CG5472-PD | 63..391 | 74..407 | 606 | 39.7 | Plus |
Pal2-PA | 406 | CG5472-PA | 63..391 | 74..407 | 606 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20251-PA | 552 | GI20251-PA | 26..552 | 21..541 | 2074 | 73 | Plus |
Dmoj\GI20014-PA | 388 | GI20014-PA | 87..372 | 101..406 | 608 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16764-PA | 543 | GL16764-PA | 28..535 | 23..532 | 2232 | 79.6 | Plus |
Dper\GL16880-PA | 370 | GL16880-PA | 31..355 | 75..407 | 617 | 41.4 | Plus |
Dper\GL11758-PA | 461 | GL11758-PA | 363..459 | 265..354 | 235 | 54.5 | Plus |
Dper\GL11758-PA | 461 | GL11758-PA | 321..384 | 53..153 | 213 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11425-PA | 538 | GA11425-PA | 1..530 | 1..532 | 2254 | 78.1 | Plus |
Dpse\GA18906-PA | 391 | GA18906-PA | 73..376 | 83..407 | 617 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21169-PA | 541 | GM21169-PA | 1..541 | 1..541 | 2875 | 98 | Plus |
Dsec\GM16037-PA | 406 | GM16037-PA | 4..391 | 15..407 | 620 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10702-PA | 526 | GD10702-PA | 1..526 | 1..541 | 2758 | 95 | Plus |
Dsim\GD11785-PA | 406 | GD11785-PA | 4..391 | 15..407 | 618 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20204-PA | 543 | GJ20204-PA | 12..543 | 9..541 | 2054 | 72.4 | Plus |
Dvir\GJ21262-PA | 388 | GJ21262-PA | 87..372 | 101..406 | 610 | 42.1 | Plus |
Translation from 509 to 2134
> FI05303.hyp MKSTDSAKCLGSKSLAICCLLLHLLLCIRPAVSQTQSPQRYLHNVDSNSN NNERLHQILKGSGAGSGATQLNWPQPPKQTVPNVKTELAKLNNTYVYQNA WPANNVKLGAVTAVSFDKAGNVVIFHRVNRVWGQTTFDNRNQYQEKYRGP IRESTILALEPATGKVQYDWGKNFFYMPHGLTVDPEDNVWLTDVAMHQVF KFPPRGGDGKPALTLGDAFQPGSGRKFCKPTSVAVLDNGDFFVADGYCNA RILKYSRKGELILFWGQNTFSGISYDVAPQNFFAIPHALTLVPELQLLCA ADRENGRVQCFLSSNGTFHSQYHNQLIGDRLFSMAYTPAAGGQLVIVNGP TAELGIHPEHYNEVHGFVLSMRSKQLVSKFGPNNLQFQNPHDVAVTADGN EIYVAELNPMRIHKFVHRSLAKPMSLSASKDSRDSAISQAVGGDQVPAVA VHHPSGKAILVASLMLLFAGSTFALALIFARRRKRGCLPFGARGRRHAWE KSDGFKLGGLLDRDRNGFEKLDQQASDEEQETKTLASAQYA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pal1-PA | 541 | CG12130-PA | 1..541 | 1..541 | 2862 | 100 | Plus |
Pal1-PD | 541 | CG12130-PD | 1..541 | 1..541 | 2862 | 100 | Plus |
Pal1-PC | 511 | CG12130-PC | 1..486 | 1..486 | 2570 | 100 | Plus |
Pal2-PE | 406 | CG5472-PE | 63..391 | 74..407 | 606 | 39.7 | Plus |
Pal2-PD | 406 | CG5472-PD | 63..391 | 74..407 | 606 | 39.7 | Plus |