Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
FI05305.complete Sequence
2373 bp assembled on 2008-08-14
GenBank Submission: BT044215.1
> FI05305.complete
ATAAAATAAGATTCGCCGTTACCTGAATTTGGTCAAGTGCTGCGCAGGCG
CTGGTCCTTAAAAACCATTTGCGCATCGATTTTGAAGGAGTAAATATCGT
AGGAAAGAAAGAAACTAATGCGATCTGTGGTAGGTGTTCTATATTTGGCT
ACATTCTACATTCCGCTTAGACTTCTTCGAGCCATTTGACTTCTAAAGGC
GAACCTTGAAGACACAGTGAGACCTCTCAGGATCCGCACTGTATTGCTTG
CAAAACTGCAAAAACTAATAAGGCTTATCGATAATATTTTCAATATGTGT
GATGCAGCAATTGTCAATAGATATTAGATTGCACATTTGCCGTCTCTCCT
AATCTGCCAAAACTATCAAAACTGCAAGGGTGCAGTGAACTGGGCAAGAA
TTTAGCGACCTGGCAGCTCTTACTTCGCTTTGATCGGAACAACCTGAAGG
TAAAGAAGTCGCTACCTGCGAAGTTATTCGAGGAACTGATGGTAGCTAAA
TGGTTGAAACGGCTGGACGAGGTGAAAGGTGAAGAGAAATCCCAGCAGGA
CAAAGAAATGGAATCCGAGTCACCAGCTCAGAACCAAGAGAAACAGAAAG
TACTAGCTAACCCATCAGTTGTGGACCTTTGCAGCGATGAAGAAGTTGAG
AAATCAGTTGTTCGTTTTCGTGATATGGAAACACTGGACGTGGAATCAGT
TATCCCCAATTCCTCGCTTATGGTCCTTGACGATGAGCTGGGCGAGATCA
CCCTGCAGGACTATGCTGATCACATCAATGGAAAATTGGATGAAGCGTCT
TTGAGGAAGCGAAATCGCCGGGAGGAGGATAGCCCATCTCATAACGCCAA
AAAACAGAGATCGATAAAAGAGTTTTTGACTCCCAAGAAATCAAAGCAAG
GCCAAACATCATCTTTTGCCTTCCAGCGCTGTTTGAAAACGTATAGCAGA
CGACCAAAGCTAGAAAATTATACAAGTGGCGAAGCAGGCGGTATCACATC
CAACATAGTTATGGTTGATGAAAGTCAAGAAGAAGCCCGCGAATCTCTTA
TAATTGATAATCCAAAACCAAAAACCCCAACAGATTGGAGGGAGCCTAAC
CAAAGTGATATCATGAAAGAGGTATCAAATTCCGACGACTTGATCGAGAA
AGAAACTTCACCCTGTGATCCCTTAGCAAGCTTAGATATTAATGTTCCAA
GTAAATCCGACCCAGAAGTGCCTTCTGAAATTTATGGAGAAGCGAACAAA
AATATAAACATATTGAACGAATCACCAAAGAACATGCCGCTCCTGAAGGA
CATACTTTCAACTGACCCAGAGGCTCATAAAGAAAATAATCCTGATATGA
GTATAACACCAGAAGTTCCCACCCAATCCCCAATAAATGCGATACGAATT
CGTAGTGACCTGGTTCCCTACGCAGAGAATATGATTCGGGTTCGCACTGA
CCTGTTGCAGGAGCAAGTTGACCCGTCTGAACCTTTCAAGGCACTGGGAA
CAGCTGAAAAGCTAAGGTTGTTACCGCCAGGAAAACAGTGCAATAGCCTA
CAGCCGAAAACCACAGACATGGATGACTATAATCCCACATCAGTGACAAC
ATCTACAAATTCACCGAATTTTCCGGATGCCGATGCACCAGGAATTACCT
ATACCTATCAAATAAATAGGCTACCATCACCACCTGCTCCAGCCACAACA
TCCAGCAATCCGGCGACTGCTCCCTATAATGCTTCTCCAGTTTCTACCCA
ACCCTCTGGTCTGCTGCCCGCACCAGTATTCCACGACGAAAATCCACGAC
CTCTCTCGGTAGTTACTACTTCTGTAATCAACTCCCGCTATCCAGTGGAT
CCGCGACCAGCCAATTCGTATTGGTACACTCGACCAAATCATCATCCAGC
TACTCCGGTGGTTCCGACTCCGACCAGTACCACGTCCATTTATCAGCCGA
CCACCAGCTCCAGTTACCAAGGACAAAACCCTGTGCCTGCTGTACTGTCT
AGTGGTTATATTCCTGGGCCTCCTGATTCCAGAGCTGCAAATAATAATGC
GCCTATTGGAAGCAATCCTCGCACCGACTTGACCAACATCATGCGCATGC
TAGCTGACGTGTCGTTCTTTGCCTATTGTCAAAACAATAGGGAGGCTTAC
CATCTGGTCAATCAGCTACGCCACAGTCTTCAGACGGGAGCCTCAAATCG
TTTCCAAGCTCCCAGCGAAATGTTTGACCATTGAATCACATTGCAAATGA
CGTCCTCATCTCGAATATTTGTTTCTAGTCTAGTTTTAGGCCTTTGTTAA
ATGCGCAATTATAATTTGATAGTAAATATCAATAAAATCATAGTAATACA
ATATTAAAAAAAAAAAAAAAAAA
FI05305.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:05:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17129-RA | 2496 | CG17129-RA | 100..2455 | 1..2356 | 11780 | 100 | Plus |
CG17129-RB | 2410 | CG17129-RB | 228..2386 | 198..2356 | 10795 | 100 | Plus |
CG17129-RC | 2310 | CG17129-RC | 228..2277 | 307..2356 | 10250 | 100 | Plus |
CG17129-RB | 2410 | CG17129-RB | 100..229 | 1..130 | 650 | 100 | Plus |
CG17129-RC | 2310 | CG17129-RC | 100..228 | 1..129 | 645 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:14:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 677651..679597 | 2355..409 | 9615 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 679668..680074 | 407..1 | 1945 | 98.5 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:14:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:14:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 677878..679827 | 2356..407 | 9750 | 100 | Minus |
3L | 28110227 | 3L | 679896..680302 | 407..1 | 2035 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 677878..679827 | 2356..407 | 9750 | 100 | Minus |
3L | 28103327 | 3L | 679896..680302 | 407..1 | 2035 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 23:14:52 has no hits.
FI05305.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:15:37 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 677651..679599 | 407..2355 | 99 | <- | Minus |
chr3L | 679669..680074 | 1..406 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:50:26 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RB | 1..1746 | 489..2234 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:08:42 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RB | 1..1746 | 489..2234 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:34:55 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RC | 1..1746 | 489..2234 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:57 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RC | 1..1746 | 489..2234 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:26:06 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RC | 1..1746 | 489..2234 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:35:04 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RA | 1..2355 | 1..2355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:08:42 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RA | 21..2375 | 1..2355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:34:55 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RA | 25..2379 | 1..2355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:29:33 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RA | 1..2355 | 1..2355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:26:06 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17129-RA | 25..2379 | 1..2355 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:37 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 677879..679827 | 407..2355 | 100 | <- | Minus |
3L | 679897..680302 | 1..406 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:37 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 677879..679827 | 407..2355 | 100 | <- | Minus |
3L | 679897..680302 | 1..406 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:37 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 677879..679827 | 407..2355 | 100 | <- | Minus |
3L | 679897..680302 | 1..406 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:34:55 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 677879..679827 | 407..2355 | 100 | <- | Minus |
arm_3L | 679897..680302 | 1..406 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:38:18 Download gff for
FI05305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 677879..679827 | 407..2355 | 100 | <- | Minus |
3L | 679897..680302 | 1..406 | 100 | | Minus |
FI05305.pep Sequence
Translation from 488 to 2233
> FI05305.pep
MVAKWLKRLDEVKGEEKSQQDKEMESESPAQNQEKQKVLANPSVVDLCSD
EEVEKSVVRFRDMETLDVESVIPNSSLMVLDDELGEITLQDYADHINGKL
DEASLRKRNRREEDSPSHNAKKQRSIKEFLTPKKSKQGQTSSFAFQRCLK
TYSRRPKLENYTSGEAGGITSNIVMVDESQEEARESLIIDNPKPKTPTDW
REPNQSDIMKEVSNSDDLIEKETSPCDPLASLDINVPSKSDPEVPSEIYG
EANKNINILNESPKNMPLLKDILSTDPEAHKENNPDMSITPEVPTQSPIN
AIRIRSDLVPYAENMIRVRTDLLQEQVDPSEPFKALGTAEKLRLLPPGKQ
CNSLQPKTTDMDDYNPTSVTTSTNSPNFPDADAPGITYTYQINRLPSPPA
PATTSSNPATAPYNASPVSTQPSGLLPAPVFHDENPRPLSVVTTSVINSR
YPVDPRPANSYWYTRPNHHPATPVVPTPTSTTSIYQPTTSSSYQGQNPVP
AVLSSGYIPGPPDSRAANNNAPIGSNPRTDLTNIMRMLADVSFFAYCQNN
REAYHLVNQLRHSLQTGASNRFQAPSEMFDH*
FI05305.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:52:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14651-PA | 730 | GG14651-PA | 60..726 | 2..575 | 1345 | 53.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17129-PB | 581 | CG17129-PB | 1..581 | 1..581 | 3037 | 100 | Plus |
CG17129-PA | 581 | CG17129-PA | 1..581 | 1..581 | 3037 | 100 | Plus |
CG17129-PC | 581 | CG17129-PC | 1..581 | 1..581 | 3037 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:52:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14264-PA | 655 | GM14264-PA | 60..651 | 2..551 | 1692 | 65.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:52:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13520-PA | 635 | GD13520-PA | 115..631 | 114..575 | 1228 | 57.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:52:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21009-PA | 705 | GE21009-PA | 60..699 | 2..572 | 1353 | 52.4 | Plus |
FI05305.hyp Sequence
Translation from 488 to 2233
> FI05305.hyp
MVAKWLKRLDEVKGEEKSQQDKEMESESPAQNQEKQKVLANPSVVDLCSD
EEVEKSVVRFRDMETLDVESVIPNSSLMVLDDELGEITLQDYADHINGKL
DEASLRKRNRREEDSPSHNAKKQRSIKEFLTPKKSKQGQTSSFAFQRCLK
TYSRRPKLENYTSGEAGGITSNIVMVDESQEEARESLIIDNPKPKTPTDW
REPNQSDIMKEVSNSDDLIEKETSPCDPLASLDINVPSKSDPEVPSEIYG
EANKNINILNESPKNMPLLKDILSTDPEAHKENNPDMSITPEVPTQSPIN
AIRIRSDLVPYAENMIRVRTDLLQEQVDPSEPFKALGTAEKLRLLPPGKQ
CNSLQPKTTDMDDYNPTSVTTSTNSPNFPDADAPGITYTYQINRLPSPPA
PATTSSNPATAPYNASPVSTQPSGLLPAPVFHDENPRPLSVVTTSVINSR
YPVDPRPANSYWYTRPNHHPATPVVPTPTSTTSIYQPTTSSSYQGQNPVP
AVLSSGYIPGPPDSRAANNNAPIGSNPRTDLTNIMRMLADVSFFAYCQNN
REAYHLVNQLRHSLQTGASNRFQAPSEMFDH*
FI05305.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:53:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17129-PB | 581 | CG17129-PB | 1..581 | 1..581 | 3037 | 100 | Plus |
CG17129-PA | 581 | CG17129-PA | 1..581 | 1..581 | 3037 | 100 | Plus |
CG17129-PC | 581 | CG17129-PC | 1..581 | 1..581 | 3037 | 100 | Plus |