Clone FI05339 Report

Search the DGRC for FI05339

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:53
Well:39
Vector:pOT2
Associated Gene/TranscriptCG30493-RB
Protein status:FI05339.pep: gold
Sequenced Size:1611

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30493 2008-12-18 5.12 accounting

Clone Sequence Records

FI05339.complete Sequence

1611 bp assembled on 2008-09-17

GenBank Submission: BT044540.1

> FI05339.complete
CCAAACAAACCGATTTCAATTGCCTCAACGATTTCAAGCCGCTTAAATGG
CAAACGTGCGCTGTTTATACAAGCTTATTCGTCTGCAGAAGCTCCTGCTG
CCGCTCAATGCGACTAGCTCCCGTTTGGCTCCACTGCAGCCGAGACCATT
GACATTTTTAATAGCAAGGAGTTATGGAAAGGATGAGAAGAAAGCCAATC
TAGAAGACTTTAGAGCCCGCGAGGAGCAGCGCGAAAGGGAGCGGGATGCG
GCCGATCAAGCTGCCGAAAAGGCATCACAAAAAGAAGCAGGCGGAGGTGG
TGGACTGGGTGCAAAAGGATCAGAGTCTACAGGCCCAGAAGATGACGCCA
AGCAAGCCAAGGTGGATGCCATAAGGGCAAAGATCCTGGACGCTGCATTG
CAGCATGTGCCCCAGCAGGGCTGGACCCGCCAGGCCATCATTCTGGGTGC
CGAGGAAAGTGGCTATCCTAGCGTGGTGCACGGCATGTTTCCCGAGGGTG
GCTTCGCGCTGGTCTCCCACTTCAACGGCAAGTGCAACGCCCAGCTGGTG
GAAAGCCTGCAGCAAAAGACAGATGGTGGCAAGCAGGAGGTGGAGGATCC
TCTAGATTTTCTGGTACAAGCAGTGCGCCAGCGTCTGGAGATGGTTACTC
CCTACAAGACGCATTGGCCCCAGGCGATGGCCCTATTAGCCCAGCCCCAG
CATGCGCCCACAGCTCTGGCCCAGGTGCTCACCCTGGTGGATGACATCTG
CTACTACTCCGGAGATCGATCTGTGGATTTCGGTTGGTACACGAGACGTG
TGGGTCTGGCGACCATCATGAAGATGACCGAGTTGTACTTCCTGCAGGAC
AAGTCCCCAGGACATGCGCAGACCTGGGAGTTCCTCAAGAGCCGCATGGA
CGAGGCTGTGCAACTCCAAATGATGCTATCCCAAACAGAGGGCATGACGC
ACACGTTCCAACGCTCCTTTAACTCGGCGTTCATCACGGCGCGTAATATT
CTCGGTCTGGGCTACAATCGTAACTAGCACGGAAGTGAAACCATGTCGGG
ATCCGATGCCTTGAGTGCCACACGCAGTCCAAAGATTAATAATTTTAGTG
AGAACGGTTCTGCTAGCCCTTAAAGATCTACACCTATACTTACCTTAGAT
CCATATGTATATATGTGCATATAAGTACATCCTATTCAACACCCAATGAC
AGTTTTAAGCTTATTTGTATTTTCGGGGAAGTTGATTTTAAATATTTTGT
TACGACATATTCTCGATTTTTCTTACTTTGCTGATATTCGTAGCCCAATA
CTGCAAATAAAGGGGGAAAACGGGAATGTGTCCATAATTTTTAAAGTTTG
TTTCCTTATTAGTGTTTCCTATTAACGTTGCCAATTTTCTGAATAGTTGG
CTCTGTCCAATCGCTGACTAATCAAGCGCATGACCTTCGTGCCCTCAAAC
TTGCAGTTGAAACGCTTAAGTGATTTTGCATAGATACAGCTCACGGAAAT
TTAAGGTTTACTTAAGGCTTAGGTAAATATAATAAAGGTTAAACAAGCTG
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

FI05339.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:37:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG30493-RB 1727 CG30493-RB 179..1727 1..1550 7695 99.8 Plus
torso-RB 3067 torso-RB 2988..3067 1303..1223 365 98.7 Minus
torso.a 3050 torso.a 2973..3050 1303..1225 355 98.7 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3589263..3589933 108..778 3310 99.6 Plus
chr2R 21145070 chr2R 3590259..3590820 988..1550 2765 99.8 Plus
chr2R 21145070 chr2R 3589993..3590203 779..989 1055 100 Plus
chr2R 21145070 chr2R 3586600..3586706 1..107 520 99.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:14:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7701944..7702614 108..778 3355 100 Plus
2R 25286936 2R 7702940..7703502 988..1551 2770 99.8 Plus
2R 25286936 2R 7702674..7702884 779..989 1055 100 Plus
2R 25286936 2R 7699281..7699387 1..107 520 99.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7703143..7703813 108..778 3355 100 Plus
2R 25260384 2R 7704139..7704701 988..1551 2780 99.8 Plus
2R 25260384 2R 7703873..7704083 779..989 1055 100 Plus
2R 25260384 2R 7700480..7700586 1..107 520 99 Plus
Blast to na_te.dros performed on 2019-03-15 14:57:24 has no hits.

FI05339.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:58:11 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3586600..3586706 1..107 99 -> Plus
chr2R 3589263..3589933 108..778 99 -> Plus
chr2R 3589993..3590202 779..988 100 -> Plus
chr2R 3590260..3590820 989..1550 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:50:35 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 1..981 47..1027 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:08:11 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 1..981 47..1027 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:54:50 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 1..981 47..1027 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:19:34 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 1..981 47..1027 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:05:34 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 1..1549 1..1550 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:08:11 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 1..1549 1..1550 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:54:50 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 29..1577 1..1550 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-19 10:47:17 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 1..1549 1..1550 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:19:34 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 29..1577 1..1550 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:58:11 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7699281..7699387 1..107 99 -> Plus
2R 7701944..7702614 108..778 100 -> Plus
2R 7702674..7702883 779..988 100 -> Plus
2R 7702941..7703501 989..1550 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:58:11 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7699281..7699387 1..107 99 -> Plus
2R 7701944..7702614 108..778 100 -> Plus
2R 7702674..7702883 779..988 100 -> Plus
2R 7702941..7703501 989..1550 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:58:11 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7699281..7699387 1..107 99 -> Plus
2R 7701944..7702614 108..778 100 -> Plus
2R 7702674..7702883 779..988 100 -> Plus
2R 7702941..7703501 989..1550 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:54:50 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3586786..3586892 1..107 99 -> Plus
arm_2R 3589449..3590119 108..778 100 -> Plus
arm_2R 3590179..3590388 779..988 100 -> Plus
arm_2R 3590446..3591006 989..1550 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:00:27 Download gff for FI05339.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7703143..7703813 108..778 100 -> Plus
2R 7703873..7704082 779..988 100 -> Plus
2R 7704140..7704700 989..1550 99   Plus
2R 7700480..7700586 1..107 99 -> Plus

FI05339.pep Sequence

Translation from 46 to 1026

> FI05339.pep
MANVRCLYKLIRLQKLLLPLNATSSRLAPLQPRPLTFLIARSYGKDEKKA
NLEDFRAREEQRERERDAADQAAEKASQKEAGGGGGLGAKGSESTGPEDD
AKQAKVDAIRAKILDAALQHVPQQGWTRQAIILGAEESGYPSVVHGMFPE
GGFALVSHFNGKCNAQLVESLQQKTDGGKQEVEDPLDFLVQAVRQRLEMV
TPYKTHWPQAMALLAQPQHAPTALAQVLTLVDDICYYSGDRSVDFGWYTR
RVGLATIMKMTELYFLQDKSPGHAQTWEFLKSRMDEAVQLQMMLSQTEGM
THTFQRSFNSAFITARNILGLGYNRN*

FI05339.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:38:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13196-PA 306 GF13196-PA 7..306 20..326 1310 79.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23297-PA 326 GG23297-PA 1..326 1..326 1564 95.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21886-PA 324 GH21886-PA 93..324 95..326 1042 83.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG30493-PB 326 CG30493-PB 1..326 1..326 1683 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20385-PA 322 GI20385-PA 27..322 31..326 1066 73.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10525-PA 324 GL10525-PA 7..324 16..326 1145 75.2 Plus
Dper\GL15417-PA 169 GL15417-PA 1..169 106..274 766 81.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15880-PA 324 GA15880-PA 7..324 16..326 1148 75.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:38:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20975-PA 108 GM20975-PA 1..108 219..326 585 98.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22111-PA 328 GJ22111-PA 47..328 41..326 1103 77.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17800-PA 311 GK17800-PA 30..310 40..325 1164 76 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:38:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19143-PA 323 GE19143-PA 1..323 1..326 1482 95.7 Plus

FI05339.hyp Sequence

Translation from 46 to 1026

> FI05339.hyp
MANVRCLYKLIRLQKLLLPLNATSSRLAPLQPRPLTFLIARSYGKDEKKA
NLEDFRAREEQRERERDAADQAAEKASQKEAGGGGGLGAKGSESTGPEDD
AKQAKVDAIRAKILDAALQHVPQQGWTRQAIILGAEESGYPSVVHGMFPE
GGFALVSHFNGKCNAQLVESLQQKTDGGKQEVEDPLDFLVQAVRQRLEMV
TPYKTHWPQAMALLAQPQHAPTALAQVLTLVDDICYYSGDRSVDFGWYTR
RVGLATIMKMTELYFLQDKSPGHAQTWEFLKSRMDEAVQLQMMLSQTEGM
THTFQRSFNSAFITARNILGLGYNRN*

FI05339.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:53:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG30493-PB 326 CG30493-PB 1..326 1..326 1683 100 Plus