Clone FI05616 Report

Search the DGRC for FI05616

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:56
Well:16
Vector:pOT2
Associated Gene/Transcriptboss-RA
Protein status:FI05616.pep: gold
Sequenced Size:3012

Clone Sequence Records

FI05616.complete Sequence

3012 bp assembled on 2009-09-29

GenBank Submission: BT088800.1

> FI05616.complete
TTTAAACGTGGACGTGGTCCGTCGGTAAGATATTGCTATCAAAATAAAAA
TAAAATGATATCAATTATCAGTACATGTTGAAGGAAAGACTGCTGCATTG
CTTAATTATCAACGGACATTTTTTGTATTTAATTGTAAAACCTTTAAAAC
TTTAGAAATGAAGGTCATGGACGCTTTGCAATCTGGACGGAGAAAGCCAT
TACCAGTGGCTCTTCTATGCATCCTAGTCACTGTGTTCTGCGTCTTGGAG
TGCCATGGAGCTGACCTGACATCACCCACCAAGAAGTCCGCTCCCCTTCG
AATAACCAAACCACAGCCCACAAGTCAGCAGGCCAAGCCCATCAGTATTA
CCACAAGGGCCCCAACAACGGTGGCATCAACCACCGATGATGAAGTCTCC
AGCTCCGTCGATGGTCAGCTGGCCCCGCTCATCTCATCCACAACCGAGGG
ACCCAGCAGTGGAACAACTGCCAGCTTAGTGCCGGAAATATGTCTCAATG
GTCTGCAGTTGACGGTCAATAGTGCGGATGAGGGAACGGTTATACGGAAG
CAGGAGGAGTTTGTCAAGATACTCGAAGGAGATGTGGTGCTCAGTGTCTT
GACCAAGGACCCCGACTCCGCGTTGTTCGTAATCAATCGTGTGAACCAGG
CGAATCTTATAATGGCAGACTTTGAAATTGGAATTCGCGCCATCAGCATC
GACAACGCCAGCTTGGCAGAGAACTTGCTTATTCAAGAAGTTCAGTTTCT
GCAGCAGTGCACGACGTACTCGATGGGCATATTCGTTGACTGGGAGCTGT
ACAAACAACTGGAGTCTGTTATCAAGGACTTGGAATACAATATCTGGCCA
ATACCGGGAACGCGGGCGCACCTCTTTCCCAAAGTTGCGCACTTGCTGCA
TCAAATGCCTTGGGGCGAAAAAATCGCATCCGTGGAAATAGCAACCGAAA
CGCTGGAGATGTACAATGAATTCATGGAAGCCGCTCGCCAGGAGCACATG
TGCCTCATGCACTTCAAAAGTGACGATAATGTTTACATAATGTTTGGCAA
TAAGCTAGCTAGTCACTTCAAGGAAAACGGCACTCTGTTTTCCGTGCCCA
CCGATAGAACGGACGATGAATTTCTGGCAGACTTACCAAACAGAGCTTTT
GTCCTAATGGAAAACGAAATTGACCTGAGCACCGCCGTTGAATTGGACGC
CACGCCCACCGCTTTGGACGAGATCCTGATCGGGAAGAGTGTGTTACCAT
CGCGAGTCCTGAGCTTTGCCGGCTCCATAATCGACCTGATGAACTGGCTG
CGCGGATCCCTGTCCAAGCACTGTAAGCGTGGTGAGGAGCACGACTTGTA
TGTGCTGGAGAGCTGTTTCAACTTCCTGAACTTCATCGAGGACTGGCGAA
CCTCGGAGTACCGACAAGCCCATGATACGGCTGAGATCCTGTCGCTGCTG
CTGATGCGCAAGTTGGGCACCGCCATGAACTTTCAGATGTACCAGAAGAA
AGTGTTGACGCTGGACAAGATCACAGGTGAATCGCGTACCGAACTGCGCG
AGATTGCGTCGCAGAACTTTGTGACCAATGTGACCACGTACTATCACTAT
AATCGGGACAATCACACCAGTTTGGAGCTGAAGACCAAGTTTGGTCAGGT
GTTCAACTGCCAGTACAGTGCTGGTGACAATAGGAGATATCCATTCCTTT
TCGATGGTGAATCCGTTATGTTCTGGCGCATCAAGATGGACACATGGGTG
GCAACTGGGCTGACGGCTGCTATCCTGGGCCTGATTGCCACGCTCGCCAT
CCTGGTGTTCATTGTGGTGCGCATCTCGTTGGGCGATGTCTTCGAGGGAA
ATCCGACCACCTCGATTCTCCTTCTACTCTCCCTCATCTTAGTGTTTTGC
TCCTTTGTGCCCTATTCGATTGAATACGTGGGTGAGCAGCGCAATTCGCA
TGTGACCTTCGAGGATGCCCAGACTCTGAATACCCTGTGCGCGGTGAGGG
TGTTCATCATGACTCTGGTCTACTGTTTTGTTTTTTCCCTGCTCCTCTGT
CGCGCCGTGATGTTGGCTTCAATTGGTTCCGAAGGTGGCTTCCTATCCCA
TGTGAATGGATATATTCAGGCAGTGATTTGCGCCTTTAGTGTTGTGGCCC
AAGTGGGCATGTCCGTGCAACTTCTGGTGGTGATGCACGTCGCCTCGGAG
ACTGTGTCCTGTGAGAATATTTACTATGGTCGATGGTTGTGGGGACTGTT
GGCCTACGACTTTGCTCTACTGTGCTGTGTGGGCGCCTTGATACCCTCTA
TATACAGATCCCAACGAAACTATCGCGAGGGAATACTCATTGTCATTGGA
TCGGTTTTAATTATGGTAATTTGGGTGGCCTGGATAGCGCTATCCTTATT
CGGGGACGAGTGGAGGGATGCGGCCATTCCATTGGGATTGCAGGCCTCTG
GTTGGGCGGTACTGGTGGGCATTCTGATACCACGCACCTTCCTCATCGTA
AGGGGTATCGAGCGGTCGGATATTGCCCAAGCTCTGCCTTCACTCACTTC
GCTGGCTTTTGCCCAGAACAATCAATACTCCTCGGAACAGAGTGTTTACG
AGTGCGTGAATCCCGCCATGCGCCATTGTTCCCAGGATGAGGTGAACCAC
CAGTCGCCTAGTGAGATTCCCACGTTACCCCTTCGAGGAGGTGGCCCACG
TCGCCAGCAGTTCTTTGCCAATCTCCGCCAGGCCAATGCCAACATTAATC
CACAACGTCCTCCACCTCGACCCCAGCAGAGTCCCTCCCGATCCTCGGTG
TCCTCGCTGCCGCCCTCGCCCGATCACAACAAGATCACCCGGTTTTAGCC
CACGAGTGTACAATGTGGCACTTCTAGTCAACGCTCCCAGTACGTGAATT
CAGCTAAGAACTGTCCAACATTTTGAATCACTGACGAACCAAGAACTTAT
TGAAGTTGATAAAATAAATAATAAATCGATACAAATTAATATAATCACAA
AAAAAAAAAAAA

FI05616.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
boss-RA 3155 boss-RA 35..3034 1..3000 15000 100 Plus
boss.a 3155 boss.a 69..3034 35..3000 14830 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:02:35
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21788007..21789468 1129..2590 7220 99.6 Plus
chr3R 27901430 chr3R 21786907..21787379 209..681 2365 100 Plus
chr3R 27901430 chr3R 21787437..21787887 680..1130 2255 100 Plus
chr3R 27901430 chr3R 21789526..21789937 2587..2998 2045 99.8 Plus
chr3R 27901430 chr3R 21786423..21786597 35..209 845 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:15:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:02:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25965018..25966479 1129..2590 7310 100 Plus
3R 32079331 3R 25963918..25964390 209..681 2365 100 Plus
3R 32079331 3R 25964448..25964898 680..1130 2255 100 Plus
3R 32079331 3R 25966537..25966950 2587..3000 2070 100 Plus
3R 32079331 3R 25963441..25963615 35..209 875 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25705849..25707310 1129..2590 7310 100 Plus
3R 31820162 3R 25704749..25705221 209..681 2365 100 Plus
3R 31820162 3R 25705279..25705729 680..1130 2255 100 Plus
3R 31820162 3R 25707368..25707781 2587..3000 2070 100 Plus
3R 31820162 3R 25704272..25704446 35..209 875 100 Plus
3R 31820162 3R 25702840..25702874 1..35 175 100 Plus
Blast to na_te.dros performed on 2019-03-16 17:02:34 has no hits.

FI05616.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:03:20 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21784989..21785023 1..35 97 -> Plus
chr3R 21786424..21786597 36..209 98 -> Plus
chr3R 21786908..21787378 210..680 100 -> Plus
chr3R 21787438..21787887 681..1130 100 -> Plus
chr3R 21788009..21789468 1131..2590 99 -> Plus
chr3R 21789530..21789937 2591..2998 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:56:06 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
boss-RA 1..2691 158..2848 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:35:37 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
boss-RA 1..2691 158..2848 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:27:45 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
boss-RA 1..2691 158..2848 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:49:43 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
boss-RA 1..2691 158..2848 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-29 10:52:13 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
boss-RA 16..3013 1..2998 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:35:37 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
boss-RA 16..3013 1..2998 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:45 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
boss-RA 16..3013 1..2998 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:49:43 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
boss-RA 16..3013 1..2998 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:03:20 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25962009..25962043 1..35 100 -> Plus
3R 25963442..25963615 36..209 100 -> Plus
3R 25963919..25964389 210..680 100 -> Plus
3R 25964449..25964898 681..1130 100 -> Plus
3R 25965020..25966479 1131..2590 100 -> Plus
3R 25966541..25966948 2591..2998 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:03:20 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25962009..25962043 1..35 100 -> Plus
3R 25963442..25963615 36..209 100 -> Plus
3R 25963919..25964389 210..680 100 -> Plus
3R 25964449..25964898 681..1130 100 -> Plus
3R 25965020..25966479 1131..2590 100 -> Plus
3R 25966541..25966948 2591..2998 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:03:20 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25962009..25962043 1..35 100 -> Plus
3R 25963442..25963615 36..209 100 -> Plus
3R 25963919..25964389 210..680 100 -> Plus
3R 25964449..25964898 681..1130 100 -> Plus
3R 25965020..25966479 1131..2590 100 -> Plus
3R 25966541..25966948 2591..2998 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:45 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21789164..21789337 36..209 100 -> Plus
arm_3R 21787731..21787765 1..35 100 -> Plus
arm_3R 21789641..21790111 210..680 100 -> Plus
arm_3R 21790171..21790620 681..1130 100 -> Plus
arm_3R 21790742..21792201 1131..2590 100 -> Plus
arm_3R 21792263..21792670 2591..2998 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:19:09 Download gff for FI05616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25704750..25705220 210..680 100 -> Plus
3R 25705280..25705729 681..1130 100 -> Plus
3R 25705851..25707310 1131..2590 100 -> Plus
3R 25707372..25707779 2591..2998 100   Plus
3R 25702840..25702874 1..35 100 -> Plus
3R 25704273..25704446 36..209 100 -> Plus

FI05616.pep Sequence

Translation from 157 to 2847

> FI05616.pep
MKVMDALQSGRRKPLPVALLCILVTVFCVLECHGADLTSPTKKSAPLRIT
KPQPTSQQAKPISITTRAPTTVASTTDDEVSSSVDGQLAPLISSTTEGPS
SGTTASLVPEICLNGLQLTVNSADEGTVIRKQEEFVKILEGDVVLSVLTK
DPDSALFVINRVNQANLIMADFEIGIRAISIDNASLAENLLIQEVQFLQQ
CTTYSMGIFVDWELYKQLESVIKDLEYNIWPIPGTRAHLFPKVAHLLHQM
PWGEKIASVEIATETLEMYNEFMEAARQEHMCLMHFKSDDNVYIMFGNKL
ASHFKENGTLFSVPTDRTDDEFLADLPNRAFVLMENEIDLSTAVELDATP
TALDEILIGKSVLPSRVLSFAGSIIDLMNWLRGSLSKHCKRGEEHDLYVL
ESCFNFLNFIEDWRTSEYRQAHDTAEILSLLLMRKLGTAMNFQMYQKKVL
TLDKITGESRTELREIASQNFVTNVTTYYHYNRDNHTSLELKTKFGQVFN
CQYSAGDNRRYPFLFDGESVMFWRIKMDTWVATGLTAAILGLIATLAILV
FIVVRISLGDVFEGNPTTSILLLLSLILVFCSFVPYSIEYVGEQRNSHVT
FEDAQTLNTLCAVRVFIMTLVYCFVFSLLLCRAVMLASIGSEGGFLSHVN
GYIQAVICAFSVVAQVGMSVQLLVVMHVASETVSCENIYYGRWLWGLLAY
DFALLCCVGALIPSIYRSQRNYREGILIVIGSVLIMVIWVAWIALSLFGD
EWRDAAIPLGLQASGWAVLVGILIPRTFLIVRGIERSDIAQALPSLTSLA
FAQNNQYSSEQSVYECVNPAMRHCSQDEVNHQSPSEIPTLPLRGGGPRRQ
QFFANLRQANANINPQRPPPRPQQSPSRSSVSSLPPSPDHNKITRF*

FI05616.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16791-PA 892 GF16791-PA 1..892 4..896 4037 88.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\boss-PA 900 GG11445-PA 1..900 1..896 4724 97.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:54:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19447-PA 922 GH19447-PA 40..922 14..896 3613 78.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
boss-PA 896 CG8285-PA 1..896 1..896 4610 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:54:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24680-PA 886 GI24680-PA 8..886 18..896 3626 80 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21808-PA 886 GL21808-PA 1..886 4..896 3715 83 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:54:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20955-PA 899 GA20955-PA 1..899 4..896 3865 85.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\boss-PA 896 GD21254-PA 1..896 1..896 4762 98.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:54:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\boss-PA 878 GJ23899-PA 1..878 19..896 3642 79.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:54:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12877-PA 902 GK12877-PA 1..864 4..859 3670 81.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\boss-PA 896 GE23639-PA 1..896 1..896 4729 98 Plus

FI05616.hyp Sequence

Translation from 157 to 2847

> FI05616.hyp
MKVMDALQSGRRKPLPVALLCILVTVFCVLECHGADLTSPTKKSAPLRIT
KPQPTSQQAKPISITTRAPTTVASTTDDEVSSSVDGQLAPLISSTTEGPS
SGTTASLVPEICLNGLQLTVNSADEGTVIRKQEEFVKILEGDVVLSVLTK
DPDSALFVINRVNQANLIMADFEIGIRAISIDNASLAENLLIQEVQFLQQ
CTTYSMGIFVDWELYKQLESVIKDLEYNIWPIPGTRAHLFPKVAHLLHQM
PWGEKIASVEIATETLEMYNEFMEAARQEHMCLMHFKSDDNVYIMFGNKL
ASHFKENGTLFSVPTDRTDDEFLADLPNRAFVLMENEIDLSTAVELDATP
TALDEILIGKSVLPSRVLSFAGSIIDLMNWLRGSLSKHCKRGEEHDLYVL
ESCFNFLNFIEDWRTSEYRQAHDTAEILSLLLMRKLGTAMNFQMYQKKVL
TLDKITGESRTELREIASQNFVTNVTTYYHYNRDNHTSLELKTKFGQVFN
CQYSAGDNRRYPFLFDGESVMFWRIKMDTWVATGLTAAILGLIATLAILV
FIVVRISLGDVFEGNPTTSILLLLSLILVFCSFVPYSIEYVGEQRNSHVT
FEDAQTLNTLCAVRVFIMTLVYCFVFSLLLCRAVMLASIGSEGGFLSHVN
GYIQAVICAFSVVAQVGMSVQLLVVMHVASETVSCENIYYGRWLWGLLAY
DFALLCCVGALIPSIYRSQRNYREGILIVIGSVLIMVIWVAWIALSLFGD
EWRDAAIPLGLQASGWAVLVGILIPRTFLIVRGIERSDIAQALPSLTSLA
FAQNNQYSSEQSVYECVNPAMRHCSQDEVNHQSPSEIPTLPLRGGGPRRQ
QFFANLRQANANINPQRPPPRPQQSPSRSSVSSLPPSPDHNKITRF*

FI05616.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
boss-PA 896 CG8285-PA 1..896 1..896 4610 100 Plus