Clone FI05918 Report

Search the DGRC for FI05918

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:59
Well:18
Vector:pOT2
Associated Gene/TranscripteIF3-S8-RA
Protein status:FI05918.pep: gold
Sequenced Size:3246

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
eIF3-S8 2008-12-18 5.12 accounting

Clone Sequence Records

FI05918.complete Sequence

3246 bp assembled on 2008-09-12

GenBank Submission: BT044242.1

> FI05918.complete
AATACATAAATCAAACGCCCCGCCCCGTGACTTTGAGCAATATATATCGC
CAACGAAAACACATGCAACCATCGCCCATCTCTAGTCTCTCTTTTTGATG
TCTTGTGCATTCGACATCGTTTAGTTTTGCTGTAAAATAGCGCAGACAAA
CGGCCGCGTAGAAAGTCAACAAAGATGTCGCGTTTCTTTGCCAACGGGTC
CGAATCGGAGTCCGAGTCCAGCGAGGAGGAGATCCAAGCGACCAACTTCA
ACAAAGCCAGCGCCTTCCAATTCAGCGACGATGAGGAGGAGGTCAAGCGC
GTGGTCCGCTCCACGAAGGAGAAGCGTTACGAGAACCTCACCAGCATCAT
CAAAACCATTCGCAACCACAAGAAAATCAAGGATATTCCCAATACCCTGA
GCAGCTTCGAGGATCTGACGCGCGCCTACCAGAAGGCACTGCCGGTCATC
TCAAAGGAGGAGAACGGCATTACGCCGCGATTTTACATTCGCTGCCTGGC
CGAGCTGGAGGACTTCATCAACGAGGTGTGGGAGGATCGCGAGGGCAGGA
AAAACCTTTCCAAGAACAACTCCAAGTCGCTGGGCACTTTGCGCCAGAAG
GTACGCAAGTACATCAAGGACTTCGAGGACGATCTGTCGCGTTTCCGTGA
AGCACCCGACCAGGAGAGCGAGGCCGAGGACGAGGTGGTTGCCCTGGAGA
GCGACGGCGGCGATGCTGGTGATGACAGCGACGCCGGAGTGAAGCCTACA
GAAGCGGTTCCGAAAGCTGTGAAGTCCGCGCCGGCAAAGGCTGCGCCCGC
CGATGATGACGATTCCGATGACTCCATTGATTGGGACTCGGACTCTGAAT
CGGAGACCGAGTCCTCTGACGATGAGAACCAGTATCAGAACATGCGCGAG
CGATTCTTGAAGCGTACTACCGAAAAGGAGGAAAAGGATGATGACAAGAG
GAAGGACAAGCGTAAGGAGCAGAAGACCAAGATCCGCAAGCGCGCCGAGG
ACGATGAAGATGGCGAGTGGGAGACTGTGGTCAAGGGTCATGTAGTAGAG
AAGCCCAAGATGTTCGAAAAGGACGCAGAGATCGATGTTCCCCTAGTGCT
GGCCAAGCTGTTGGAAATTATGTCGGCTCGCGGCAAGAAGCGCACCGATC
GCCGTCTGCAGATCGATCTGCTTTTCGAGTTGAGGGACATCTCTGATCAG
CACAACCTGGGAACCGCCGTCTCCGTGAAGATTCATTTTAACATCATCTC
GGCTATCTACGATTACAACCAGAAGATTTCCGAGCCCATGAAGCTAGAAC
ACTGGGCCCTGCTTCTGGAGGTAATGCAGAGCATGATGAAGCTCCTGCTG
GCCAACGCCGACATTATTATGAGCGAGAGCGTGGCCGAGGAGCATGAGGA
GTACGCTACGTCACCGTTTTATGTGAGGGGATGCCCACTGGCTGCCGTGG
AGCGCCTGGATGACGAATTTGTTAAGCTGCTGAAGGAATGCGATCCACAC
TCCAACGACTACGTGTCCCGGCTGAAGGACGAGGTGAACGTGGTTAAGAC
TATTGAACTGGTGCTGCAGTATTTCGAGCGCTCTGGCACCAACAACGAGC
GCTGTCGCATCTACCTGCGCAAGATCGAACATCTCTACTATAAGTTCGAT
CCGGAGGTGCTGAAGAAGAAGCGCGGTGAGCTGCCAGCCACTACCTCCAC
CTCCGTAGACGTGATGGATAAGCTGTGCAAATTCATCTACGCTAAGGACG
ATACGGATCGTATCCGTACGAGGGCCATCCTGGCGCACATCTACCATCAT
GCTATGCACGACAACTGGTTCCAGGCCCGTGATTTGGTGCTGATGTCTCA
TCTGCAGGACAACATTGATGCCGCCGATCCCGCCACCCGCATCCTGTACA
ACCGTATGATGGCCAATCTGGGTCTGTGTGCCTTCCGCCAGGGCAACGTC
AAGGATGCGCATCACTGTCTAGTGGACTTGATGGTCACCGGCAAGCCCAA
GGAGCTGCTCGCTCAAGGACTGCTGCCTCAGCGCCAGCACGAGCGATCTG
CCGAGCAGGAGAAAATCGAGAAGCAACGCCAGATGCCATTCCATATGCAC
ATCAACCTTGAGTTGCTTGAATGTGTCTACCTGGTGTCCGCTATGCTGCT
CGAAATTCCTTACATTGCCGCCCATGAATTCGACGCCCGCCGCCGCATGA
TCAGTAAGACCTTCTACCAGCAGTTGCGTTCCTCGGAGCGTCAATCACTG
GTGGGTCCACCAGAGTCGATGCGTGAGCATGTCGTGGCTGCTGCCAAGGC
TATGCGTTGCGGCAACTGGCAGGCGTGTGCCAACTTCATTGTCAACAAGA
AGATGAACACGAAAGTGTGGGACCTCTTCTACGAGTCTGATCGCGTGCGC
GAGATGCTGACCAAGTTCATTAAGGAAGAATCGCTGCGCACCTACCTGTT
CACCTACTCGAACGTCTACACCTCGATCAGCATTCCTTCGCTGGCGCAGA
TGTACGAGCTGCCCGTGCCGAAAGTGCACTCCATCATCAGTAAGATGATC
ATCAACGAGGAGCTCATGGCCAGCCTGGACGATCCATCCGAAACCGTGGG
TATGCATCGTTCGGAGCCATCGCGTCTTCAGGCCCTGGCCATGCAATTCG
TGGACAAGGTCACAAATCTGGTGGACGTCAACGAAAAGGTGTTCGACATG
AAGCAGGGCAACTTCTTCCAGCGCGGCAACATGGGCAATCGCGGTGACCG
TGGCTACAACCGCAACCAGAACAACCAGGGCGGCAATTGGCTCGGCCAGC
GGCGGGATCGCAACAACCGGAACCGTAACCAGCGCGGGCACCACAAGAAC
AACCAAGATAGGCAGCAGCAGCAACAGCAACAAGTCCAAACGATCGACGA
GGAGTAGACGTTGCTGCAACCTCAGCCCATCCTCTCTAGCGAGCGTTAGC
TTAAACATCAGCAAAACTTAAACAGATCAAATTTGTAGCACTTCGACTAT
TAAAATGGAATGGCCATGGACAACACGTTGGGTCACATGCTTTCAGGCCT
CCGATTCGGTTTCAGGCTGGGTCGGAGGTCTGTTTTTATCATGTCCATTG
CATATTGTTGTAGCCAAGTCACACGAACATTTGTTTCAGCGCTCATTACG
TTAAATGATAATACTAATAACTACATTTTGTATGAACCCAAAACCGAAAA
AGAAACCTTAAAAACAAGAGACACAAAAAAAAAAAAAAAAAAAAAA

FI05918.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:00:40
Subject Length Description Subject Range Query Range Score Percent Strand
eIF3-S8-RA 3368 eIF3-S8-RA 48..3275 1..3228 16140 100 Plus
eIF3-S8.a 3294 eIF3-S8.a 1..3232 1..3228 16075 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 13553303..13556259 268..3224 14605 99.6 Plus
chr2R 21145070 chr2R 13552759..13552898 1..140 685 99.3 Plus
chr2R 21145070 chr2R 13553113..13553240 140..267 640 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:15:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17666222..17669182 268..3228 14805 100 Plus
2R 25286936 2R 17665678..17665817 1..140 700 100 Plus
2R 25286936 2R 17666032..17666159 140..267 640 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 17667421..17670381 268..3228 14805 100 Plus
2R 25260384 2R 17666877..17667016 1..140 700 100 Plus
2R 25260384 2R 17667231..17667358 140..267 640 100 Plus
Blast to na_te.dros performed 2019-03-15 14:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6902 2719..2890 187 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6948 2757..2966 171 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..6923 2702..2881 169 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2288..2396 2776..2883 163 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2429 2752..2883 156 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6912 2811..2963 155 59.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2623 2724..3037 146 54.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6894 2797..2966 143 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2374 2814..2882 135 68.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6727..6796 2810..2883 135 68.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6852 2828..2963 131 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2352..2525 2719..2889 123 55.4 Plus
roo 9092 roo DM_ROO 9092bp 1053..1156 2789..2883 120 63.5 Plus

FI05918.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:52:31 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 13552759..13552897 1..139 99 -> Plus
chr2R 13553113..13553240 140..267 100 -> Plus
chr2R 13553303..13556259 268..3224 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:51:39 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..2733 175..2907 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:00:39 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..2733 175..2907 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:46:55 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..2733 175..2907 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:12:43 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..2733 175..2907 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:18:38 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..3224 1..3224 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:00:39 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..3224 1..3224 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:46:55 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..3143 82..3224 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-12 09:26:45 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..3224 1..3224 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:12:43 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 1..3143 82..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:31 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17665678..17665816 1..139 100 -> Plus
2R 17666032..17666159 140..267 100 -> Plus
2R 17666222..17669178 268..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:31 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17665678..17665816 1..139 100 -> Plus
2R 17666032..17666159 140..267 100 -> Plus
2R 17666222..17669178 268..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:31 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17665678..17665816 1..139 100 -> Plus
2R 17666032..17666159 140..267 100 -> Plus
2R 17666222..17669178 268..3224 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:46:55 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13553183..13553321 1..139 100 -> Plus
arm_2R 13553537..13553664 140..267 100 -> Plus
arm_2R 13553727..13556683 268..3224 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:27:44 Download gff for FI05918.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17667421..17670377 268..3224 100   Plus
2R 17666877..17667015 1..139 100 -> Plus
2R 17667231..17667358 140..267 100 -> Plus

FI05918.pep Sequence

Translation from 174 to 2906

> FI05918.pep
MSRFFANGSESESESSEEEIQATNFNKASAFQFSDDEEEVKRVVRSTKEK
RYENLTSIIKTIRNHKKIKDIPNTLSSFEDLTRAYQKALPVISKEENGIT
PRFYIRCLAELEDFINEVWEDREGRKNLSKNNSKSLGTLRQKVRKYIKDF
EDDLSRFREAPDQESEAEDEVVALESDGGDAGDDSDAGVKPTEAVPKAVK
SAPAKAAPADDDDSDDSIDWDSDSESETESSDDENQYQNMRERFLKRTTE
KEEKDDDKRKDKRKEQKTKIRKRAEDDEDGEWETVVKGHVVEKPKMFEKD
AEIDVPLVLAKLLEIMSARGKKRTDRRLQIDLLFELRDISDQHNLGTAVS
VKIHFNIISAIYDYNQKISEPMKLEHWALLLEVMQSMMKLLLANADIIMS
ESVAEEHEEYATSPFYVRGCPLAAVERLDDEFVKLLKECDPHSNDYVSRL
KDEVNVVKTIELVLQYFERSGTNNERCRIYLRKIEHLYYKFDPEVLKKKR
GELPATTSTSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQ
ARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQGNVKDAHHCLV
DLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLEC
VYLVSAMLLEIPYIAAHEFDARRRMISKTFYQQLRSSERQSLVGPPESMR
EHVVAAAKAMRCGNWQACANFIVNKKMNTKVWDLFYESDRVREMLTKFIK
EESLRTYLFTYSNVYTSISIPSLAQMYELPVPKVHSIISKMIINEELMAS
LDDPSETVGMHRSEPSRLQALAMQFVDKVTNLVDVNEKVFDMKQGNFFQR
GNMGNRGDRGYNRNQNNQGGNWLGQRRDRNNRNRNQRGHHKNNQDRQQQQ
QQQVQTIDEE*

FI05918.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:55:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11658-PA 906 GF11658-PA 1..906 1..910 4094 93 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21805-PA 910 GG21805-PA 1..910 1..910 4860 98.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20077-PA 928 GH20077-PA 1..928 1..910 3915 87.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:47
Subject Length Description Subject Range Query Range Score Percent Strand
eIF3c-PB 910 CG4954-PB 1..910 1..910 4706 100 Plus
eIF3c-PA 910 CG4954-PA 1..910 1..910 4706 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18792-PA 913 GI18792-PA 1..897 1..891 3952 90.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16787-PA 911 GL16787-PA 1..911 1..910 4088 91.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18551-PA 911 GA18551-PA 1..911 1..910 4090 91.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21808-PA 910 GM21808-PA 1..910 1..910 4910 99.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11297-PA 435 GD11297-PA 1..433 1..433 2252 99.3 Plus
Dsim\GD11299-PA 308 GD11299-PA 1..308 603..910 1685 100 Plus
Dsim\GD11298-PA 139 GD11298-PA 11..132 449..570 665 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:55:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21821-PA 913 GJ21821-PA 1..897 1..891 3913 89.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:55:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15661-PA 919 GK15661-PA 1..893 1..891 3888 89.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:55:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11882-PA 910 GE11882-PA 1..910 1..910 4847 98.6 Plus

FI05918.hyp Sequence

Translation from 174 to 2906

> FI05918.hyp
MSRFFANGSESESESSEEEIQATNFNKASAFQFSDDEEEVKRVVRSTKEK
RYENLTSIIKTIRNHKKIKDIPNTLSSFEDLTRAYQKALPVISKEENGIT
PRFYIRCLAELEDFINEVWEDREGRKNLSKNNSKSLGTLRQKVRKYIKDF
EDDLSRFREAPDQESEAEDEVVALESDGGDAGDDSDAGVKPTEAVPKAVK
SAPAKAAPADDDDSDDSIDWDSDSESETESSDDENQYQNMRERFLKRTTE
KEEKDDDKRKDKRKEQKTKIRKRAEDDEDGEWETVVKGHVVEKPKMFEKD
AEIDVPLVLAKLLEIMSARGKKRTDRRLQIDLLFELRDISDQHNLGTAVS
VKIHFNIISAIYDYNQKISEPMKLEHWALLLEVMQSMMKLLLANADIIMS
ESVAEEHEEYATSPFYVRGCPLAAVERLDDEFVKLLKECDPHSNDYVSRL
KDEVNVVKTIELVLQYFERSGTNNERCRIYLRKIEHLYYKFDPEVLKKKR
GELPATTSTSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQ
ARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQGNVKDAHHCLV
DLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLEC
VYLVSAMLLEIPYIAAHEFDARRRMISKTFYQQLRSSERQSLVGPPESMR
EHVVAAAKAMRCGNWQACANFIVNKKMNTKVWDLFYESDRVREMLTKFIK
EESLRTYLFTYSNVYTSISIPSLAQMYELPVPKVHSIISKMIINEELMAS
LDDPSETVGMHRSEPSRLQALAMQFVDKVTNLVDVNEKVFDMKQGNFFQR
GNMGNRGDRGYNRNQNNQGGNWLGQRRDRNNRNRNQRGHHKNNQDRQQQQ
QQQVQTIDEE*

FI05918.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
eIF3-S8-PB 910 CG4954-PB 1..910 1..910 4706 100 Plus
eIF3-S8-PA 910 CG4954-PA 1..910 1..910 4706 100 Plus