BDGP Sequence Production Resources |
Search the DGRC for FI06002
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 60 |
Well: | 2 |
Vector: | pOTB7 |
Associated Gene/Transcript | Rcd7-RA |
Protein status: | FI06002.pep: gold |
Sequenced Size: | 1865 |
Gene | Date | Evidence |
---|---|---|
CG14098 | 2008-08-15 | Release 5.9 accounting |
CG14098 | 2008-12-18 | 5.12 accounting |
1865 bp assembled on 2008-08-11
GenBank Submission: BT044243.1
> FI06002.complete CCAAAGTTTTTTTATTCAACGGAAATTTAAATATATAGCGAAAGCACACT TATATCCCTTCTAGCAGAGATATGGTGCCTCTTGAGATATTTCGCGTTAT TGTCATTATCATACTACTGATTAGCATCACCGTGGTTTTTTCCCTTCGGC TAAGCACCCCAGAGCAAGAATAAAGACTTGAAAGGACACATCCGCTTACC TGCATATTCTCGTGCTTCTCCTTGCGATTGGCGATCGCTTTGAGCTCCTC GCTGCAAATCAAAGAACTCACGTAGTTTGTGGTCAGGTTGTCTATGAAGT TCTTCTGCCTGGACTGAGTGGCGTTCCACCACCTGCGCACCACAGCAGGC AGCTTGCGGAGCACCTCCGTGTACAAGTGGCAGGCATATCGCTCCAGGGG TAGATGTCGATCTGCAAAATGGATCAAGAAATGTAACAAGCATGGAAAAC CCAATAAACTTCAAGGATATACCCTCCGAGATGCCGCAGCCAAAGCGCAT TCAACTTGAGGGCGAGACTTCGGTGGCCGAAGCCATAAACTTCCTGAAGA CGCAATGCGATACGCGCAAGGAGCACAAGCCTGAGGAGTTTCAGCAGGAT GGACCAACCGTAGCGGACGAGTTAAACGCTCGCCTGGCCATGGTTCATGT GCGCGAGACTCGTGCCAAACGCATTCGCCGCTTAGTTAAGTTTTCCCCCA ATGAGACGCAAGCATTGTACAGGTTCATCTGTGTCTGTCCCCGCTACCAT CCTTGCTATGTGCCCTGCCAACACACGGGACAAATAATCATCGACCGGGA CGTGTTGTCCCGCGAGGAACACATATGTTTTCTAGCTACACCCAAGAAGG ACTTCTCCTCACCCCAGTTGGCCAAACAGGCGCGCTACTACACCAAAAAG ATCTACGTTAACCAATGTACAGCACGGGTTGAACGACTTGCCGATCCTCA CCCAATGCGAGTGAGTGACACATACAATTTCTTTAAGGACTACCTCTCGC CTCGTCATATAGCGGCTCTAGAGAACCAGATGAAACCCAAACCTCCGGTA GAAGCCATGTCAATGGAGAAGGCGCTGGAATACATGGAGGAGGAGATGCG TCAGCGCAAGGCAGCGAAGCGTGTCCAAAAGCGACGATGCAAGGGTCTAA AAAAACGAATCATTTTGCGCCAGCGCAAGCAGATGCAAAAGATAATTTGC GTACTGTTCGAGGAAATGAAGGACTTTCTACTCAACGATCAGTTTATTGT TGACGAGAACTCCCCTCTATGTTGCGTAATTCTTGAGAGACTTCGAGAAT TTACAGATCAAGAATTCTATACGACAAGTAATTTGCAAGAGTATCAGAGG ATATTGGCCAACAACCTAACCGTTTGGGTCAACAAGTTCATATCAAACTT AAACATTTACTTGACACCTCAGCAAATACCTGTAAAACGACAGATGATGG CAGAGAACGATCCCGAACAGTTTGTGCCCTTGTCAGATTTCATTTCTGTA TCCGATGAGGCGGATGCAGAGGAAATGATGAACGATGTCGAGCACGGAGC CGCTGAATATGACGACTATGGATATGGGGAGGACTACTTGCCCGACGTTC TCAATACGGATATATCGGAGGAAACAATAATCTAAGTAATGTTCAGCTTA CCCTTCTGCTGAGACCAGGTCAGCTCTTTGTAAACGCCGTTGCTGTGGAC CTTGGCACCGTGGTTCTTAAGTATGTCCACGGGCATTGCGCGGAAAAGGA AGTGAAGGAAATTCTGTGGAGCAAAGAAATTGAAAGTGTAAATTTAAAAT TATTAGTAAATTTAATGTATCGTTTCCAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19535504..19536089 | 721..1306 | 2930 | 100 | Plus |
chr3L | 24539361 | chr3L | 19536144..19536666 | 1305..1827 | 2615 | 100 | Plus |
chr3L | 24539361 | chr3L | 19534483..19534922 | 1..440 | 2170 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 19535053..19535339 | 438..724 | 1435 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19546131..19546716 | 721..1306 | 2930 | 100 | Plus |
3L | 28110227 | 3L | 19546771..19547295 | 1305..1829 | 2625 | 100 | Plus |
3L | 28110227 | 3L | 19545110..19545549 | 1..440 | 2170 | 99.5 | Plus |
3L | 28110227 | 3L | 19545680..19545966 | 438..724 | 1435 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19539231..19539816 | 721..1306 | 2930 | 100 | Plus |
3L | 28103327 | 3L | 19539871..19540395 | 1305..1829 | 2625 | 100 | Plus |
3L | 28103327 | 3L | 19538210..19538649 | 1..440 | 2170 | 99.5 | Plus |
3L | 28103327 | 3L | 19538780..19539066 | 438..724 | 1435 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Juan | 4236 | Juan JUAN 4236bp | 2429..2492 | 413..474 | 117 | 67.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19534483..19534922 | 1..440 | 99 | -> | Plus |
chr3L | 19535056..19535337 | 441..722 | 100 | -> | Plus |
chr3L | 19535506..19536089 | 723..1306 | 100 | -> | Plus |
chr3L | 19536146..19536624 | 1307..1785 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14098-RB | 1..1194 | 442..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd7-RB | 1..1194 | 442..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd7-RA | 1..1194 | 442..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14098-RA | 1..1194 | 442..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd7-RA | 1..1194 | 442..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14098-RA | 1..1826 | 1..1826 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd7-RA | 1..1827 | 1..1827 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd7-RA | 1..1827 | 1..1827 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14098-RA | 1..1826 | 1..1826 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcd7-RA | 1..1827 | 1..1827 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19545110..19545549 | 1..440 | 99 | -> | Plus |
3L | 19545683..19545964 | 441..722 | 100 | -> | Plus |
3L | 19546133..19546716 | 723..1306 | 100 | -> | Plus |
3L | 19546773..19547293 | 1307..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19545110..19545549 | 1..440 | 99 | -> | Plus |
3L | 19545683..19545964 | 441..722 | 100 | -> | Plus |
3L | 19546133..19546716 | 723..1306 | 100 | -> | Plus |
3L | 19546773..19547293 | 1307..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19545110..19545549 | 1..440 | 99 | -> | Plus |
3L | 19545683..19545964 | 441..722 | 100 | -> | Plus |
3L | 19546133..19546716 | 723..1306 | 100 | -> | Plus |
3L | 19546773..19547293 | 1307..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19538210..19538649 | 1..440 | 99 | -> | Plus |
arm_3L | 19538783..19539064 | 441..722 | 100 | -> | Plus |
arm_3L | 19539233..19539816 | 723..1306 | 100 | -> | Plus |
arm_3L | 19539873..19540393 | 1307..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19538210..19538649 | 1..440 | 99 | -> | Plus |
3L | 19538783..19539064 | 441..722 | 100 | -> | Plus |
3L | 19539233..19539816 | 723..1306 | 100 | -> | Plus |
3L | 19539873..19540393 | 1307..1827 | 100 | Plus |
Translation from 441 to 1634
> FI06002.pep MENPINFKDIPSEMPQPKRIQLEGETSVAEAINFLKTQCDTRKEHKPEEF QQDGPTVADELNARLAMVHVRETRAKRIRRLVKFSPNETQALYRFICVCP RYHPCYVPCQHTGQIIIDRDVLSREEHICFLATPKKDFSSPQLAKQARYY TKKIYVNQCTARVERLADPHPMRVSDTYNFFKDYLSPRHIAALENQMKPK PPVEAMSMEKALEYMEEEMRQRKAAKRVQKRRCKGLKKRIILRQRKQMQK IICVLFEEMKDFLLNDQFIVDENSPLCCVILERLREFTDQEFYTTSNLQE YQRILANNLTVWVNKFISNLNIYLTPQQIPVKRQMMAENDPEQFVPLSDF ISVSDEADAEEMMNDVEHGAAEYDDYGYGEDYLPDVLNTDISEETII*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10054-PA | 405 | GF10054-PA | 7..404 | 4..397 | 1758 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16043-PA | 398 | GG16043-PA | 1..397 | 1..397 | 2048 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17181-PA | 392 | GH17181-PA | 5..391 | 4..397 | 1248 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rcd7-PB | 397 | CG14098-PB | 1..397 | 1..397 | 2088 | 100 | Plus |
Rcd7-PA | 397 | CG14098-PA | 1..397 | 1..397 | 2088 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11794-PA | 389 | GI11794-PA | 3..388 | 2..397 | 1293 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20940-PA | 399 | GL20940-PA | 3..386 | 2..389 | 1435 | 69.1 | Plus |
Dper\GL23096-PA | 399 | GL23096-PA | 5..396 | 4..397 | 1434 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27139-PA | 401 | GA27139-PA | 3..386 | 2..389 | 1428 | 69.7 | Plus |
Dpse\GA28638-PA | 399 | GA28638-PA | 3..394 | 2..392 | 1424 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19590-PA | 398 | GM19590-PA | 1..397 | 1..397 | 2098 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14811-PA | 398 | GD14811-PA | 1..397 | 1..397 | 2103 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13497-PA | 392 | GJ13497-PA | 3..391 | 2..397 | 1362 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20231-PA | 409 | GK20231-PA | 3..408 | 2..397 | 1427 | 68.1 | Plus |
Translation from 441 to 1634
> FI06002.hyp MENPINFKDIPSEMPQPKRIQLEGETSVAEAINFLKTQCDTRKEHKPEEF QQDGPTVADELNARLAMVHVRETRAKRIRRLVKFSPNETQALYRFICVCP RYHPCYVPCQHTGQIIIDRDVLSREEHICFLATPKKDFSSPQLAKQARYY TKKIYVNQCTARVERLADPHPMRVSDTYNFFKDYLSPRHIAALENQMKPK PPVEAMSMEKALEYMEEEMRQRKAAKRVQKRRCKGLKKRIILRQRKQMQK IICVLFEEMKDFLLNDQFIVDENSPLCCVILERLREFTDQEFYTTSNLQE YQRILANNLTVWVNKFISNLNIYLTPQQIPVKRQMMAENDPEQFVPLSDF ISVSDEADAEEMMNDVEHGAAEYDDYGYGEDYLPDVLNTDISEETII*