Clone FI06005 Report

Search the DGRC for FI06005

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:60
Well:5
Vector:pOTB7
Associated Gene/Transcripttam-RA
Protein status:FI06005.pep: gold
Sequenced Size:3700

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
tam 2008-08-15 Release 5.9 accounting
tam 2008-12-18 5.12 accounting

Clone Sequence Records

FI06005.complete Sequence

3700 bp assembled on 2008-07-17

GenBank Submission: BT044244.1

> FI06005.complete
GCGCACAAAAATACCTAGGCTGGCGGCAATCTTACGGAGGAGTGTGTGGT
CGCAGGTTGGACTTCAGTTGCCTTAAAGGATGTTTCCTTTATTAAAACGA
GGATGCAGTTCCACCTGATCAGAAAGTACGCCAGCAAAGTTAGCCGGGAG
CACTACGCCAGCAGTAGCGTGAAGATCTTTCGGCGGGTCAAGCCTCCGCA
AAAGGTAAACAAACCAAAGAAGCCGGAGAATGTGGAGAATGGCCCAACGG
AATATGCGGAAAATCTGGTCAAGGTGCAGATGATCTCGCGGAATTTGCAC
GCCCAACTGTTCCCACAAGCGCCGCGAAGCATTTCGGAGCAGCAGGTGGC
CTCCGCTAAGGTTTACAAAGACGAGTTGCGCCGGCACGGAGTCGATATCG
AAAGTTCTGCTCCTGTTTCGGATGTCCAGTTGAAATTGCCCGCGCTTAGG
GGCGCCAATATTGAAGAGCACTTCCACAACATTGCCAAGGAGCAAGTGCA
GCCATACGAGGAGTTACTACTTCCCCTGGTCCAATGCGAGCAGCTGCCGA
AGCGTCCGAAGCGATGGGCTTTCCATACCGGCTGGACAGCTTATGATCCA
GAGGATGGAACAGCCACGCCGGTGGATCACCCACTGGAGAAGGGACTTGT
CTTCGATGTGGAGGTGTGCGTCAGCGAGGGGCAGGCTCCAGTTTTGGCCA
CCGCCGTCAGCACCAAGAGATGGTATTCGTGGGTGAGCTCAAAGCTGACG
AAACATCGCCTAAGCGTGGAGAAATTAGAGCCATTAGATGTGGACACGGA
CTCAGAGCGACCGCACTACACTACGGACGAACTCATACCACTGGGCACCA
CTGGACCTGGCCTGGTGGTGGGTCACAATGTCTCCTACGACAGGGCGCGA
CTGAAGGAGCAGTATTTGACCGAGGACACGGGCACTCGGTTCGTGGACAC
AATGTCGCTGCACATGTGTGTCAGTGGAGTGACCAGCTACCAGCGGGCCA
TGCTCAAATCCAAGAAGGAACCGGCTGCCGAGGATCTGGGCTGGCTGGAG
CAGAGCTCTCTTAACAGTCTGGTGGAGGTGCATCGCCTCTACTGCGGTGG
GGATACGCTATCCAAGGAGCCGAGGAACATTTTCGTCGAGGGAACTCTGG
AGCAAGTACGTCAGAGCTTTCAGTCGTTAACCAACTACTGCGCCAGCGAT
GTGGAGGCTACACATCGGATACTCCGAGTCCTGTATCCCTTGTACGCAGA
ACGATTTCCGCATCCTGCCTCCTTGGCTGGCATGTTGGAGATGGGATCCG
CCTATTTGCCAGTCAATTCCAACTGGGAGCGCTACATACGTGAGGCGCAG
CTCACCTACGAGGACCTCAGCATCGAGGCCAAGTACCATTTGGGCCGCAG
AGCTGAGGAAGCGTGCTCCTTGCTGCTCGACGATCAGTACCGCCAGAATT
TGTGGCTCTGGGACGAGGATTGGAGTGTGCAGGAACTGAAACTAAAGCAG
CCGCCGAAGCGCAAGCCTCTGCCTACTGTGGAGCTTAAGGATTCTGGAAA
CACACCGGAGGAGCGACGTCTGCAGGCCAAGTTTCAGCACCTCTATGATC
AACAGGCGCTACTGCCAGCTCGACGGCCATTGCTACCCGGTTATCCTCTG
TGGTATCGCAAACTGTGCCGCAAACCACCAGCCAAAAGGGCAGATGAAAT
TCTAGAGGATGACGAAGAGCCGTGGTCCCCGGGAGCCAGCGAGATTAGCA
CCGGCATGCAGATTGCCCCCAAGCTGCTTTCCCTCTGCTGGGAAGGATAT
CCCTTGCACTACGAGAGGGAGCAAGGCTGGGGCTTCCTGGTTCCATTTCG
CAGCGATTCAGAAGGAGTAGATCGACTGCCCATGGAGCAACTTCTGGCGC
ACTGTCCAGTGCCGGAGTTTGCTCGCCTCAGCGCCTCGAAGGCGGAAAGT
GATATGGCCTTTGACATGCTGCCTGGTCAGGTTGAGCAGCATTTGGGAAA
GCGGGAACACTACAAGAAGTTGTCCCAGAAGCAACAACGTCTGGAAACCC
AGTACCAAGGCTCTGGCGTGTGGTGCAACAAAGTACTGGATGATTGCTGC
TTCTTCCTCAAGCTGCCACACAAGAATGGACCTTCCTTTCGGGTGGGCAA
CCCCCTATCCAAGGACTTCCTTAACAAGTTCGCAGAAAACGTGCTGAGCA
GTGGTGATCCATCTTGTCAAGCTGCCGCCCGCGTCATCGACATTGCCCGC
ATGATGTCCTACTGGCGCAACAATAGGGATCGAATTATGGGTCAGATGGT
GGTCTGGCTGGATTCGCAGCAACTACCAAATGAATTCACTGGCGAAAAGT
GCCAGCCAATAGCCTACGGAGCCATTTGTCCACAAGTTGTTGCCTGTGGC
ACTTTAACACGTCGCGCGATGGAACCCACATGGATGACGGCCTCCAATTC
GCGACCTGATCGGCTGGGATCGGAGCTGCGCTCGATGGTACAGGCACCAC
CGGGTTATAGACTCGTTGGTGCCGATGTCGATTCGCAGGAGCTGTGGATC
GCTTCCGTGCTGGGTGATGCCTACGCCTGCGGTGAGCACGGTGCCACGCC
ACTCGGTTGGATGACCCTCAGCGGCAGTAAGTCGAATGGCAGCGATATGC
ACTCCATAACGGCAAAGGCGGTCGGCATTTCCCGAGATCACGCCAAAGTG
ATCAACTATGCCCGGATCTACGGAGCTGGTCAATTGTTTGCCGAGACCCT
GCTCCGTCAGTTTAATCCCACATTCAGTGCATCCGAGGCGAAGGCCAAGG
CAATGAAAATGTTCTCCATCACAAAGGGGAAGCGGGTGTATCGATTGCGA
GAAGAGTTCCATGACGAACTGGAGGACAGGGCCTACAGCAGCTACGAGGC
TTCCCGACTGGCCATTCAACGCAACCGCACCCTGGCAGAGGTATTTCATC
GTCCCAACTGGCAGGGAGGCACGGAGAGCGCCATGTTCAATCGCCTGGAA
GAGATTGCCACGGGATCGCAGCCACGAACGCCGTTCCTGGGCGGACGTCT
TAGTCGAGCATTGGAGGCGGATACTGGACCGGAGCAGGAGCAACGTTTCC
TGCCAACGCGCATCAATTGGGTGGTACAGAGCGGTGCAGTGGACTTCCTT
CATCTGATGCTGGTCAGCATGCGATGGCTGATGGGATCGCATGTTAGATT
CTGCTTGAGCTTCCATGATGAATTGCGCTATTTAGTCAAGGAAGAGCTAT
CGCCCAAAGCGGCGCTGGCCATGCACATCACAAACCTAATGACGCGCTCC
TTTTGTGTGTCCCGCATCGGACTGCAGGATCTGCCCATGTCGGTTGCCTT
CTTCTCGTCCGTGGAGGTAGACACTGTGCTGCGCAAGGAGTGCACCATGG
ACTGCAAGACGCCCTCGAATCCGCATGGCCTGCGCATCGGCTATGGTATT
CAGCCTGGTCAGAGCTTGAGCGTAGCGGAGGCAATCGAGAAGGCTGGAGG
CAACGATGTCAGTCAGTGGGATTGGATAAAGAAGAGTTAGCTGCCAAATA
CTATAGATTAAATCATAAGTACTAAGTTGTTACTCAGGAAGTCAAGGAGA
CTTGGAGGCTGTTACTAGTTCCTCTTAAATTGTAAGGCCCAAAATGTTAA
ATATACATAAATCAAGTGTATTTGAAAAAAAAAAAAAAAAAAAAAAAAAA

FI06005.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
tam-RA 3804 tam-RA 1..3677 1..3677 18220 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:40:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13824477..13826536 2060..1 10300 100 Minus
chr2L 23010047 chr2L 13823600..13824424 2882..2058 4110 99.9 Minus
chr2L 23010047 chr2L 13822749..13823540 3674..2883 3885 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:15:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13825734..13827793 2060..1 10300 100 Minus
2L 23513712 2L 13824857..13825681 2882..2058 4050 99.4 Minus
2L 23513712 2L 13824003..13824797 3677..2883 3885 99.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13825734..13827793 2060..1 10300 100 Minus
2L 23513712 2L 13824857..13825681 2882..2058 4050 99.3 Minus
2L 23513712 2L 13824003..13824797 3677..2883 3885 99.2 Minus
Blast to na_te.dros performed on 2019-03-16 00:40:09 has no hits.

FI06005.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:40:50 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13822749..13823540 2883..3674 99 <- Minus
chr2L 13823600..13824422 2060..2882 99 <- Minus
chr2L 13824478..13826536 1..2059 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:51:41 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3438 103..3540 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:06:43 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3438 103..3540 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:51:35 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3438 103..3540 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:54:11 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3438 103..3540 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:08:32 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3438 103..3540 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:30:19 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3674 1..3674 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:06:42 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3674 1..3674 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:51:35 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3653 22..3674 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:54:11 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3674 1..3674 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:08:32 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
tam-RA 1..3653 22..3674 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:40:50 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13824006..13824797 2883..3674 99 <- Minus
2L 13824857..13825679 2060..2882 99 <- Minus
2L 13825735..13827793 1..2059 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:40:50 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13824006..13824797 2883..3674 99 <- Minus
2L 13824857..13825679 2060..2882 99 <- Minus
2L 13825735..13827793 1..2059 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:40:50 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13824006..13824797 2883..3674 99 <- Minus
2L 13824857..13825679 2060..2882 99 <- Minus
2L 13825735..13827793 1..2059 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:51:35 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13824006..13824797 2883..3674 99 <- Minus
arm_2L 13824857..13825679 2060..2882 99 <- Minus
arm_2L 13825735..13827793 1..2059 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:35:47 Download gff for FI06005.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13824006..13824797 2883..3674 99 <- Minus
2L 13824857..13825679 2060..2882 99 <- Minus
2L 13825735..13827793 1..2059 100   Minus

FI06005.pep Sequence

Translation from 102 to 3539

> FI06005.pep
MQFHLIRKYASKVSREHYASSSVKIFRRVKPPQKVNKPKKPENVENGPTE
YAENLVKVQMISRNLHAQLFPQAPRSISEQQVASAKVYKDELRRHGVDIE
SSAPVSDVQLKLPALRGANIEEHFHNIAKEQVQPYEELLLPLVQCEQLPK
RPKRWAFHTGWTAYDPEDGTATPVDHPLEKGLVFDVEVCVSEGQAPVLAT
AVSTKRWYSWVSSKLTKHRLSVEKLEPLDVDTDSERPHYTTDELIPLGTT
GPGLVVGHNVSYDRARLKEQYLTEDTGTRFVDTMSLHMCVSGVTSYQRAM
LKSKKEPAAEDLGWLEQSSLNSLVEVHRLYCGGDTLSKEPRNIFVEGTLE
QVRQSFQSLTNYCASDVEATHRILRVLYPLYAERFPHPASLAGMLEMGSA
YLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNL
WLWDEDWSVQELKLKQPPKRKPLPTVELKDSGNTPEERRLQAKFQHLYDQ
QALLPARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASEIST
GMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVDRLPMEQLLAH
CPVPEFARLSASKAESDMAFDMLPGQVEQHLGKREHYKKLSQKQQRLETQ
YQGSGVWCNKVLDDCCFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSS
GDPSCQAAARVIDIARMMSYWRNNRDRIMGQMVVWLDSQQLPNEFTGEKC
QPIAYGAICPQVVACGTLTRRAMEPTWMTASNSRPDRLGSELRSMVQAPP
GYRLVGADVDSQELWIASVLGDAYACGEHGATPLGWMTLSGSKSNGSDMH
SITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEAKAKA
MKMFSITKGKRVYRLREEFHDELEDRAYSSYEASRLAIQRNRTLAEVFHR
PNWQGGTESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPEQEQRFL
PTRINWVVQSGAVDFLHLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELS
PKAALAMHITNLMTRSFCVSRIGLQDLPMSVAFFSSVEVDTVLRKECTMD
CKTPSNPHGLRIGYGIQPGQSLSVAEAIEKAGGNDVSQWDWIKKS*

FI06005.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:05:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15619-PA 1134 GF15619-PA 1..1132 1..1137 5237 85 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10182-PA 1142 GG10182-PA 1..1142 1..1145 5919 95.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10618-PA 1147 GH10618-PA 1..1142 3..1144 4839 78 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:26:55
Subject Length Description Subject Range Query Range Score Percent Strand
tam-PA 1145 CG8987-PA 1..1145 1..1145 6053 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19730-PA 1143 GI19730-PA 3..1141 5..1145 4699 75.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21087-PA 1153 GL21087-PA 1..1149 1..1144 5249 83.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21456-PA 1153 GA21456-PA 1..1149 1..1144 5245 83.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15104-PA 1145 GM15104-PA 1..1145 1..1145 6047 97.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22040-PA 1078 GD22040-PA 1..1078 1..1145 5602 92.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:05:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18089-PA 1150 GJ18089-PA 3..1145 5..1144 4815 77.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:05:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24652-PA 1162 GK24652-PA 23..1162 5..1145 4835 77.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:05:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11427-PA 1145 GE11427-PA 1..1145 1..1145 5942 95.7 Plus

FI06005.hyp Sequence

Translation from 102 to 3539

> FI06005.hyp
MQFHLIRKYASKVSREHYASSSVKIFRRVKPPQKVNKPKKPENVENGPTE
YAENLVKVQMISRNLHAQLFPQAPRSISEQQVASAKVYKDELRRHGVDIE
SSAPVSDVQLKLPALRGANIEEHFHNIAKEQVQPYEELLLPLVQCEQLPK
RPKRWAFHTGWTAYDPEDGTATPVDHPLEKGLVFDVEVCVSEGQAPVLAT
AVSTKRWYSWVSSKLTKHRLSVEKLEPLDVDTDSERPHYTTDELIPLGTT
GPGLVVGHNVSYDRARLKEQYLTEDTGTRFVDTMSLHMCVSGVTSYQRAM
LKSKKEPAAEDLGWLEQSSLNSLVEVHRLYCGGDTLSKEPRNIFVEGTLE
QVRQSFQSLTNYCASDVEATHRILRVLYPLYAERFPHPASLAGMLEMGSA
YLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNL
WLWDEDWSVQELKLKQPPKRKPLPTVELKDSGNTPEERRLQAKFQHLYDQ
QALLPARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASEIST
GMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVDRLPMEQLLAH
CPVPEFARLSASKAESDMAFDMLPGQVEQHLGKREHYKKLSQKQQRLETQ
YQGSGVWCNKVLDDCCFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSS
GDPSCQAAARVIDIARMMSYWRNNRDRIMGQMVVWLDSQQLPNEFTGEKC
QPIAYGAICPQVVACGTLTRRAMEPTWMTASNSRPDRLGSELRSMVQAPP
GYRLVGADVDSQELWIASVLGDAYACGEHGATPLGWMTLSGSKSNGSDMH
SITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEAKAKA
MKMFSITKGKRVYRLREEFHDELEDRAYSSYEASRLAIQRNRTLAEVFHR
PNWQGGTESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPEQEQRFL
PTRINWVVQSGAVDFLHLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELS
PKAALAMHITNLMTRSFCVSRIGLQDLPMSVAFFSSVEVDTVLRKECTMD
CKTPSNPHGLRIGYGIQPGQSLSVAEAIEKAGGNDVSQWDWIKKS*

FI06005.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
tam-PA 1145 CG8987-PA 1..1145 1..1145 6053 100 Plus