Clone FI06006 Report

Search the DGRC for FI06006

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:60
Well:6
Vector:pOTB7
Associated Gene/TranscriptCG31161-RB
Protein status:FI06006.pep: gold
Sequenced Size:1683

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31161 2008-08-15 Release 5.9 accounting
CG31161 2008-12-18 5.12 accounting

Clone Sequence Records

FI06006.complete Sequence

1683 bp assembled on 2008-08-11

GenBank Submission: BT044245.1

> FI06006.complete
CAGACAAATATGTAAATTTTTACGTGCCTAGCAATAGATTATTTTGTGAT
CCAATACATGTCGGACCCATACATATTCTGTTGATCACTTTCCGAACCGA
CCCTCAACCCTCATTTTTAAATAGTGTTGTAAATTCGCATGATAGATTAG
TTGTTTTTGTGTTAAGCACTAGGCGAATTCATGGCGTTCTCCACACAAAA
AGAGTTCTTTCACGTACCCTTCAACAATGAGACATACGAATTTGAGTGTG
TCGATGCGTGTGTTAAACTTAAGAGGTATCCATCCACAGTTGACGACAGA
TCATGGTCAGCAAACGAAGATATGAAGTCACAGTTCGTGGCTGACCTGGT
GGCCTGCAACTCACCGATAAAGAAGGACCGTGGTGCCGAGCCTACCGCTA
GATCTGCTCCATTGGGTCCTGAGGATGAGTACGGCAGTAATTTAGTGGTG
GGCGACAGTTTAATAAATGCCGCGGACGACACAATTGGTCGCATGCAGGA
TCTGATGATCAAGAATAATATTCTAAAGAAGAAACTGGCCGATTCTGATG
ATAAATTGAGGACAGCCAACCAGGAGACCGCCGAGATCAAGCGGATTATG
GACCAGCGCTATGACCCCGACAAGAGCAAGGCTCTAAAAAAGAAAATCAA
GCAACTGGCCGATGACAACAAGATAACTCCGCAGGACGAGAAGGAACTGA
ACGGTCTGCAGGCGGCCATTGACGACATGAACAAGGCACACGACATCCTG
GAGGCTGAAAATGCCAATCTAAAGCGGCTGCTCGAAAAACAATCGAAGCG
CTGCAAGATGGATAGCATTAAAGTCGATCCGGAAAAGAGCAACGATATAC
CCTACCTGCAGAAGAAGATCGACGACTTGGGTAAGGAGGTGGCGCTACTG
CGTGAGTTCGAGGACGAAGTCATGAAGCGTTGCGCCAAAAAGTGCGGTGC
TGAAGGTGGTGGTGGTGGTGGAGGTGGCAATGCTGGTCGTGCCGCTAGGG
GTCCTCCTGGAAAGGGCAGTTTCTCGCCGGACAAGGATGCCGAGAACATC
AAAAAGATTCTAGCCGATCGTGATGCCCTGCGAAAGAAGTGTAAGGAACT
GGAGGAGCTCGGCGACAAAGTCAATCAACTGGAGGAGAAGGCCAATGAGG
CGGAGTGTCTGACATGCAACCTGGAGGAAAATCTACGGAAACAGTGCCGA
TGCATGGAGCAAATGCAGTGTGAAATGCGAGATATGCAGAACTACTACGA
AAACGAGGTAGACAAGGCTAGGGGCAATGAGGAAATCCTTAAGTGCCGTT
GTAATCAGATGAAGCAGGAACTGGTGGCAGCCAAATGTGCCGTCCAGCGG
GCCCAGTGTCAACAAATGGAGATCGATGTGCTGCGAAACGAGCTGCGAAA
ACGGGACACTGCCCTCAACGCATACGACTGCCAGTTCCAGCAGATTATGA
TGAAGGCCAAGATGTTCAAGGCCGCCGGTTACCGCTTCCTTGACGACTTG
CCTCCCGACTGCAGCGAAAGTTGCGTGGATGGCCCTGGTGAAGAGGAAGA
GGGAAATTGAAGCCCCCAGAAGGCATATCTTATCTATTGTTCAGATTTTT
TCAAAATTCAAGCAGCTATCTATCAAAATCTATAGTTTTATTAAATTAAA
CCATTACTTCAAGCGTAAAAAAAAAAAAAAAAA

FI06006.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31161-RA 1740 CG31161-RA 63..1729 1..1667 8260 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18440053..18441345 1..1293 6450 99.9 Plus
chr3R 27901430 chr3R 18441625..18441842 1449..1666 1045 98.6 Plus
chr3R 27901430 chr3R 18441414..18441571 1292..1449 775 99.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:15:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22616511..22617803 1..1293 6450 99.9 Plus
3R 32079331 3R 22618083..22618301 1449..1667 1050 98.6 Plus
3R 32079331 3R 22617872..22618029 1292..1449 775 99.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22357342..22358634 1..1293 6450 99.9 Plus
3R 31820162 3R 22358914..22359132 1449..1667 1050 98.6 Plus
3R 31820162 3R 22358703..22358860 1292..1449 775 99.3 Plus
Blast to na_te.dros performed 2019-03-16 01:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
FB 1106 FB DMTNFB 1106bp AKA(J01084) Derived from V00246 (g8708) (Rel. 36, Last updated, Version 3). 237..280 1611..1568 121 75 Minus

FI06006.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:29:32 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18441626..18441842 1450..1666 98   Plus
chr3R 18440053..18441345 1..1293 99 -> Plus
chr3R 18441416..18441571 1294..1449 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:51:43 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RA 1..1380 181..1560 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:37 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RB 1..1380 181..1560 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:07:04 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RB 1..1380 181..1560 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:12 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RA 1..1380 181..1560 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:34:48 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RB 1..1380 181..1560 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:48:56 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RA 1..1664 1..1664 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:37 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RB 1..1666 1..1666 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:07:04 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RB 1..1666 1..1666 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:29:16 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RA 1..1664 1..1664 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:34:48 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
CG31161-RB 1..1666 1..1666 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:29:32 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22616511..22617803 1..1293 99 -> Plus
3R 22617874..22618029 1294..1449 99 -> Plus
3R 22618084..22618300 1450..1666 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:29:32 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22616511..22617803 1..1293 99 -> Plus
3R 22617874..22618029 1294..1449 99 -> Plus
3R 22618084..22618300 1450..1666 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:29:32 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22616511..22617803 1..1293 99 -> Plus
3R 22617874..22618029 1294..1449 99 -> Plus
3R 22618084..22618300 1450..1666 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:07:04 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18443806..18444022 1450..1666 98   Plus
arm_3R 18442233..18443525 1..1293 99 -> Plus
arm_3R 18443596..18443751 1294..1449 99 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:39:32 Download gff for FI06006.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22358705..22358860 1294..1449 99 -> Plus
3R 22358915..22359131 1450..1666 98   Plus
3R 22357342..22358634 1..1293 99 -> Plus

FI06006.hyp Sequence

Translation from 180 to 1559

> FI06006.hyp
MAFSTQKEFFHVPFNNETYEFECVDACVKLKRYPSTVDDRSWSANEDMKS
QFVADLVACNSPIKKDRGAEPTARSAPLGPEDEYGSNLVVGDSLINAADD
TIGRMQDLMIKNNILKKKLADSDDKLRTANQETAEIKRIMDQRYDPDKSK
ALKKKIKQLADDNKITPQDEKELNGLQAAIDDMNKAHDILEAENANLKRL
LEKQSKRCKMDSIKVDPEKSNDIPYLQKKIDDLGKEVALLREFEDEVMKR
CAKKCGAEGGGGGGGGNAGRAARGPPGKGSFSPDKDAENIKKILADRDAL
RKKCKELEELGDKVNQLEEKANEAECLTCNLEENLRKQCRCMEQMQCEMR
DMQNYYENEVDKARGNEEILKCRCNQMKQELVAAKCAVQRAQCQQMEIDV
LRNELRKRDTALNAYDCQFQQIMMKAKMFKAAGYRFLDDLPPDCSESCVD
GPGEEEEGN*

FI06006.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31161-PB 459 CG31161-PB 1..459 1..459 2410 100 Plus
Ccy-PA 1333 CG45930-PA 1..410 1..424 1115 52.2 Plus

FI06006.pep Sequence

Translation from 180 to 1559

> FI06006.pep
MAFSTQKEFFHVPFNNETYEFECVDACVKLKRYPSTVDDRSWSANEDMKS
QFVADLVACNSPIKKDRGAEPTARSAPLGPEDEYGSNLVVGDSLINAADD
TIGRMQDLMIKNNILKKKLADSDDKLRTANQETAEIKRIMDQRYDPDKSK
ALKKKIKQLADDNKITPQDEKELNGLQAAIDDMNKAHDILEAENANLKRL
LEKQSKRCKMDSIKVDPEKSNDIPYLQKKIDDLGKEVALLREFEDEVMKR
CAKKCGAEGGGGGGGGNAGRAARGPPGKGSFSPDKDAENIKKILADRDAL
RKKCKELEELGDKVNQLEEKANEAECLTCNLEENLRKQCRCMEQMQCEMR
DMQNYYENEVDKARGNEEILKCRCNQMKQELVAAKCAVQRAQCQQMEIDV
LRNELRKRDTALNAYDCQFQQIMMKAKMFKAAGYRFLDDLPPDCSESCVD
GPGEEEEGN*

FI06006.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18866-PA 473 GF18866-PA 1..469 1..456 1630 70.4 Plus
Dana\GF19864-PA 65 GF19864-PA 1..53 372..424 225 75.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11152-PA 458 GG11152-PA 1..446 1..450 2038 91.8 Plus
Dere\GG10976-PA 212 GG10976-PA 156..210 371..425 210 65.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22472-PA 445 GH22472-PA 1..440 1..457 1035 46.8 Plus
Dgri\GH22463-PA 119 GH22463-PA 2..95 16..104 174 43.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31161-PB 459 CG31161-PB 1..459 1..459 2410 100 Plus
CCY-PB 1333 CG45930-PB 1..410 1..424 1115 52.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22248-PA 435 GI22248-PA 1..432 1..459 1079 50.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:29:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13750-PA 439 GL13750-PA 1..429 1..447 1347 59.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:29:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26783-PB 1208 GA26783-PB 231..557 74..423 1042 60 Plus
Dpse\GA26783-PB 1208 GA26783-PB 1..60 1..60 249 73.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26452-PA 460 GM26452-PA 1..460 1..459 2348 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20968-PA 668 GD20968-PA 339..668 132..459 1664 96.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10850-PA 448 GJ10850-PA 1..445 1..459 1190 52.8 Plus
Dvir\GJ10847-PA 119 GJ10847-PA 1..116 345..459 355 56.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18633-PA 451 GK18633-PA 1..433 1..441 1316 59.2 Plus
Dwil\GK23613-PA 1190 GK23613-PA 1..452 1..423 1088 49.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10318-PA 460 GE10318-PA 1..457 1..459 2111 92.6 Plus
Dyak\GE15172-PA 372 GE15172-PA 1..369 1..370 921 49.1 Plus