Clone FI06007 Report

Search the DGRC for FI06007

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:60
Well:7
Vector:pOTB7
Associated Gene/TranscriptCG13436-RA
Protein status:FI06007.pep: gold
Sequenced Size:1935

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13436 2008-08-15 Release 5.9 accounting
CG13436 2008-12-18 5.12 accounting

Clone Sequence Records

FI06007.complete Sequence

1935 bp assembled on 2008-08-11

GenBank Submission: BT044246.1

> FI06007.complete
CACGTATCAAAAACTTAGCAAGCAAACCACATTACACATTTCCTTTCATC
GAAATAGGTTAAATTGTTCTGTTTACCAAAATGCCGCGACACAAAACACT
AGTGAGCATTGGTCATCGTATTATGAAGCGCTTCAAACAGTTGGATCTCA
GGGTCGACAAGGAGTTCGTCATCTACATGGTTCATCTGCTGGCAAGAGAT
CGGCGCAAAGGTCTCCTGAAGTACGACCTCAATAAGCCAACCGCCTGTGC
CATTGAGGGTTTCGTGAATACAATTGTGGATAGCTATGTCAATTCGAAAG
ATTGCACTATGGCCAACATGAAGATGGCTTGGGTAATGAAAAAGGGAGTA
ACCATAGACCTTGAATACGTCAAGAAGAAGTACGAGGAAAAGTTCCAAAC
CGAACTGCAGCTGCTAATCAAGGATATCCTTCAGTATCCCGAGACTTGCA
GTAAAGTGCAGTTGGACCAGCTCTTCGCAAAGATGCAGGTCTTCATAGTG
GCCTGCTACAGTCTGGGCTCGCCCAAGAATCATGTTCTGCTTAAGCTGAC
TGCCCAGGCTCTCAACAGCGTCATCGGTCGAAGTGACCTACAGAATTATG
TCCTGAAGAAGAAGTACCATCGGCTAGAGTATCTTCAACGCTTGTCGGCG
ACCGTGGGCGGCATTGTGATCTATAACAACGATGGCCCCGATGGAGATCG
GGAGAATGTTAGAAGCGTGGTCGATGATCTGGAAATGGCCCAGAAAAACA
CGGAAGCCGCATTTGCAGCCAGTATGGGAAGGGCGGTCAAGATGCAGTCC
ACTTGCCAGGCGGCACTGGATGACCTCATAAACATAGATCATAAGGACGA
GACCTTGACCTACCGCGTGCCCCTCGAGCACCTGGATCGGCTGAACCAGT
TTGCGGCGACCTACTTTATGCTCCATCGCTGTCTGACGACTCTGAACGAA
CATTACCAGAAGACAGTGTACCTAATTGAAGTGGAGCATAAGCGATATCA
ATGCGTGATCTGCAAGATTGATGATACCCTATCCATGCGCACGGCTATTG
ATTCGGAGCTTATATTTCCGCACTTTGTGTACCTCTCTCAGGTGTGGGGC
AATCTGAACAACTACCTGAACCACATTGTTGAGTTAAACAAGCTGAGGGA
GCAGGTGGAGGCATTGGTCGTCGACGACTTGATGACCCTGACAAAGGCTA
CGATTGCCGAGCTGCAGGCGCTTCATAAGCGGATAAAGAAGCCCAAGGTC
TGCAGCTTTGAGGAACGCATGGATGCCGTGAAGGAGTTGCAGACCGATGG
CAACTTTTGCAAGCTCAACAAGGCAGATATAAAGGAGTTTTGCTCTCTAG
CCATGACCATCACCAACGGCCTGCTTATGCCGGCCCAGGTGACCAGAAAG
CTGTGCTCCAATGTGGACATTACATTTGGTTTCCGGGACCCAAGATACGC
TCGATTCGCGGAGCTGCGATTTGAGCCTTTCATAGCCGCCTTTAGAAAAG
TGGTTTTCAACAATGCGAACCTGGCTCTGCTGTTCAAATTGGACGATGCG
CTAATAGAGCAGGAACTGCAGAATCTGGTAGTTGAGCCACCAAAGCAGAC
AGATTTTGAGTGTCAAACCGAAATGGTCGTCACCAACGACCTAACGCCAG
CCAACTGGATAAACGTAACGTGGAATGCGTGGGATTATCATCGGGAGACA
ATCCACTTGGCCAATATACGTAAGAAGCAGACCAACGACGCGCAGACCAA
CATCAGTTACGGAAGGCGCAACGCACAGAATCAAACCTACAACTGTCGGC
AACATAAGTAGAGAACGGCAAAGAACATATACTCACCGATTTTCGATTTT
CTTAAATCGAAGAACCCTAGAACACGATTCACAATAAAGTATATAAAGTG
GTCCTGCCACACCAGGGAAAAAAAAAAAAAAAAAA

FI06007.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG13436-RA 1972 CG13436-RA 56..1967 1..1912 9335 99.2 Plus
rig-RB 4206 rig-RB 2112..2187 1912..1837 350 97.3 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:33:24
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16524287..16525136 1068..1917 4130 99.1 Plus
chr2R 21145070 chr2R 16523105..16523821 1..717 3495 99.2 Plus
chr2R 21145070 chr2R 16523877..16524227 717..1067 1680 98.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:15:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20637574..20638418 1068..1912 4120 99.2 Plus
2R 25286936 2R 20636392..20637108 1..717 3540 99.6 Plus
2R 25286936 2R 20637164..20637514 717..1067 1680 98.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 20638773..20639617 1068..1912 4120 99.1 Plus
2R 25260384 2R 20637591..20638307 1..717 3540 99.5 Plus
2R 25260384 2R 20638363..20638713 717..1067 1680 98.5 Plus
Blast to na_te.dros performed on 2019-03-15 16:33:22 has no hits.

FI06007.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:34:06 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16523105..16523821 1..717 99 -> Plus
chr2R 16523878..16524227 718..1067 98 -> Plus
chr2R 16524287..16525136 1068..1917 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:51:44 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1731 81..1811 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:10 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1731 81..1811 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:18:37 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1731 81..1811 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:05 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1731 81..1811 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:42:11 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1731 81..1811 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:48:15 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1917 1..1917 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:10 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1917 1..1917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:18:37 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1917 1..1917 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:29:27 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1917 1..1917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:42:11 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
CG13436-RA 1..1917 1..1917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:34:06 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20636392..20637108 1..717 99 -> Plus
2R 20637165..20637514 718..1067 98 -> Plus
2R 20637574..20638423 1068..1917 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:34:06 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20636392..20637108 1..717 99 -> Plus
2R 20637165..20637514 718..1067 98 -> Plus
2R 20637574..20638423 1068..1917 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:34:06 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20636392..20637108 1..717 99 -> Plus
2R 20637165..20637514 718..1067 98 -> Plus
2R 20637574..20638423 1068..1917 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:18:37 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16523897..16524613 1..717 99 -> Plus
arm_2R 16524670..16525019 718..1067 98 -> Plus
arm_2R 16525079..16525928 1068..1917 98   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:38:55 Download gff for FI06007.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20637591..20638307 1..717 99 -> Plus
2R 20638364..20638713 718..1067 98 -> Plus
2R 20638773..20639622 1068..1917 98   Plus

FI06007.pep Sequence

Translation from 80 to 1810

> FI06007.pep
MPRHKTLVSIGHRIMKRFKQLDLRVDKEFVIYMVHLLARDRRKGLLKYDL
NKPTACAIEGFVNTIVDSYVNSKDCTMANMKMAWVMKKGVTIDLEYVKKK
YEEKFQTELQLLIKDILQYPETCSKVQLDQLFAKMQVFIVACYSLGSPKN
HVLLKLTAQALNSVIGRSDLQNYVLKKKYHRLEYLQRLSATVGGIVIYNN
DGPDGDRENVRSVVDDLEMAQKNTEAAFAASMGRAVKMQSTCQAALDDLI
NIDHKDETLTYRVPLEHLDRLNQFAATYFMLHRCLTTLNEHYQKTVYLIE
VEHKRYQCVICKIDDTLSMRTAIDSELIFPHFVYLSQVWGNLNNYLNHIV
ELNKLREQVEALVVDDLMTLTKATIAELQALHKRIKKPKVCSFEERMDAV
KELQTDGNFCKLNKADIKEFCSLAMTITNGLLMPAQVTRKLCSNVDITFG
FRDPRYARFAELRFEPFIAAFRKVVFNNANLALLFKLDDALIEQELQNLV
VEPPKQTDFECQTEMVVTNDLTPANWINVTWNAWDYHRETIHLANIRKKQ
TNDAQTNISYGRRNAQNQTYNCRQHK*

FI06007.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12186-PA 576 GF12186-PA 1..575 1..575 2466 77.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:27:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22046-PA 576 GG22046-PA 1..576 1..576 2975 94.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21985-PA 578 GH21985-PA 4..577 2..575 1987 65.3 Plus
Dgri\GH22432-PA 456 GH22432-PA 123..455 243..575 1206 66.1 Plus
Dgri\GH22432-PA 456 GH22432-PA 4..130 2..128 305 50.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13436-PA 576 CG13436-PA 1..576 1..576 3000 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19688-PA 579 GI19688-PA 7..577 5..575 1963 62.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17037-PA 575 GL17037-PA 1..575 1..576 2317 74.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:27:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12286-PA 575 GA12286-PA 1..575 1..576 2325 74.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:27:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22030-PA 576 GM22030-PA 1..576 1..576 3047 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:27:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11527-PA 576 GD11527-PA 1..576 1..576 3038 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:27:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17257-PA 577 GJ17257-PA 6..576 4..574 1980 64.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21484-PA 577 GK21484-PA 1..575 1..574 2134 68.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:27:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12127-PA 576 GE12127-PA 1..576 1..576 2993 95.8 Plus

FI06007.hyp Sequence

Translation from 80 to 1810

> FI06007.hyp
MPRHKTLVSIGHRIMKRFKQLDLRVDKEFVIYMVHLLARDRRKGLLKYDL
NKPTACAIEGFVNTIVDSYVNSKDCTMANMKMAWVMKKGVTIDLEYVKKK
YEEKFQTELQLLIKDILQYPETCSKVQLDQLFAKMQVFIVACYSLGSPKN
HVLLKLTAQALNSVIGRSDLQNYVLKKKYHRLEYLQRLSATVGGIVIYNN
DGPDGDRENVRSVVDDLEMAQKNTEAAFAASMGRAVKMQSTCQAALDDLI
NIDHKDETLTYRVPLEHLDRLNQFAATYFMLHRCLTTLNEHYQKTVYLIE
VEHKRYQCVICKIDDTLSMRTAIDSELIFPHFVYLSQVWGNLNNYLNHIV
ELNKLREQVEALVVDDLMTLTKATIAELQALHKRIKKPKVCSFEERMDAV
KELQTDGNFCKLNKADIKEFCSLAMTITNGLLMPAQVTRKLCSNVDITFG
FRDPRYARFAELRFEPFIAAFRKVVFNNANLALLFKLDDALIEQELQNLV
VEPPKQTDFECQTEMVVTNDLTPANWINVTWNAWDYHRETIHLANIRKKQ
TNDAQTNISYGRRNAQNQTYNCRQHK*

FI06007.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG13436-PA 576 CG13436-PA 1..576 1..576 3000 100 Plus