BDGP Sequence Production Resources |
Search the DGRC for FI06021
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 60 |
Well: | 21 |
Vector: | pOTB7 |
Associated Gene/Transcript | coil-RD |
Protein status: | FI06021.pep: gold |
Sequenced Size: | 2061 |
Gene | Date | Evidence |
---|---|---|
coilin | 2008-12-18 | 5.12 accounting |
2061 bp assembled on 2008-10-24
GenBank Submission: BT050478.1
> FI06021.complete GCACATTTAAAATCATTTTAATCATAAGAAAACTAAGTCAAAAATGCAAC ACTCCAGCATGAAGGTGGATCTATCAAACTTTTTCAAGGACGAACGACGA AATTCGTTGGTTTTCATCGATGCAGCATGGAACAACATCAAGGACCTCCA GGACCACATACAAAACCTCTTCAGCTTGAAGGACATTAGTCTGCTCACCT CAGATGGATGCTATCTGCCCCCGAGGGAGTCTATCAAAGTGTTGAACTCT GCCGAAGGACTCAAAGCCTTTCGGTTTGCCAGCCACGATAGTGATACCTT TGTGAGCCCTGCTCCTGTAAAATCCAGTAAAAAGCGCAAGAATCGATCCG TCGAGGAACAGGTTCACCTAACCGCCTCCACTCCCCTCCGACCTTCAAAG CGCTCCAAGAACCAGAACAACTCAGAATGGATAAATATTGCAGAAAACCC ATCTCGTGTGAGAAAGAAGGAGTTGCTAGATATGGCTCCTGGACCTTCTG TACAATCAAAGCTCTTGACAAACAAAGGCACTCCAAAGGCCCCTGAAACT CAGACAGAAGTTTCTAACATGTCAGCGAACATCGAGACAGAGAACAAGGA ATCTGCTCCTCAGATTAAAAATAAATCCAAAAACAAGAAACCGACCAAAT CGCCCGAGGCATCTGACCAGGTAGAGAATGAACCTGCTCCTAAGAGTATT TCTCGATGCACGCTCAAGGAGGGTAAAATGTCAGAAAGCAAGAATCAAGA GACATCGCCTGACATTCTATCAGAAAAATCTGGTGTGGTAACGAAGGAAA ACGAAACTCGAGAGGAGCAACAGGACAAAACACACTTGGAGTCCAACAAA ATTCCGGATAAACTATCTCAACTGAAAGCAGGGGACCAAATTGAGAAGAG TCCTGGCATTGCTGCTAGCCTCCTATCGATTTCGTTCCGCTCCCCTCTCT TGGAGATGCCCTTTAATGTTCCGCGCATATTTCAATTTCCCACTAAAAAA CAACAAATTGAAATTCTGGAATATAAAAAACTTAAGCCCATCAGTCCTCG TTTTTTGCTGCAGAAAGGGGCTAAGAGTGATGATACGGCTAAACAATTCC CAAGCAATGGGAAGGATTCAACCTTAAAGCCTAAATCCTACGAAATTTTG CACGACGAAGAATTACCAGATGTAAAGGATAAAAAAAATGTTTCAGAAGG TATAAAGAGAGCAGTTGCACCTCTTTGCGAAGACATCATTGAAACATCAA CCACTCTTCCGGGGGCCATAGGAGCAGTTGAATCCGCTTATCTGGACAAT TCGACTGAAGCTGAGACCACTCTTCCGTCCGAAGCTGAAGCAACTAATCC ACTTGAACTTACTGAGTCATTTCTACAGAACAACACATCTATGGAAAAAA CACCCAAAGTCGAAAAAATTTTGCCAGATGACGGAAGTGCATCTCCGATT AAAAATAACGTTGATTCGAAGGATGTTAAAACGGTAACAGTGCCCATTTT TGAGGAACAACTAGTATCCGATTCCGACGACGATGTGATGTTGGTAGACG ACTCCAATATCGACGTTTCATACGGCGACTCTGATATTGAACCGATTCCA GTAGTAGAAAATAGGCAATCTTTGGATATTATAAGGGACCTACTGCGGAC TGCAACTCCACTCAATAGCCTGCCGTCCAGGGGCGATACGGTTATATTTA AACTGCTGAAGATTAAGGGAAACGCCAATTCTGGCACAACCGAATTTGTC GCCGGGAGGTGCACTTACGTTAACCGGCGCACCAAAATTGTCACAGTGGA AACAATAACTTATCCCCCCGAAATCGGTCGCATGTTGCGTCAATATTATA TGAGTGGGTTGGACGAGTCTTCTGAGGATGTGCGAACTTTAAGTATTCAT CTCAAAGATATGCTTGAAGCGAAAATCATTGTAGCCACAATTGACTGATT ATCATTTTTGTGTGTACATTCTTGAGTTCTATTTCCAGGGTTTCGTACAT TTATAGCTTTTAAAATACAAACGATTAAACAACATCTAAAAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
coilin-RD | 2123 | coilin-RD | 80..2117 | 1..2038 | 10160 | 99.9 | Plus |
coilin-RC | 2079 | coilin-RC | 300..2073 | 265..2038 | 8840 | 99.8 | Plus |
coilin-RC | 2079 | coilin-RC | 1..245 | 20..264 | 1225 | 100 | Plus |
CG2158-RA | 1986 | CG2158-RA | 1891..1986 | 2038..1943 | 480 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4013022..4014358 | 1601..265 | 6670 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 4012470..4012698 | 2037..1809 | 1130 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 4012756..4012964 | 1808..1600 | 1045 | 100 | Minus |
chr2R | 21145070 | chr2R | 4014554..4014731 | 178..1 | 890 | 100 | Minus |
chr2R | 21145070 | chr2R | 4014413..4014499 | 264..178 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8125533..8126869 | 1601..265 | 6670 | 99.9 | Minus |
2R | 25286936 | 2R | 8124980..8125209 | 2038..1809 | 1135 | 99.6 | Minus |
2R | 25286936 | 2R | 8125267..8125475 | 1808..1600 | 1045 | 100 | Minus |
2R | 25286936 | 2R | 8127065..8127242 | 178..1 | 890 | 100 | Minus |
2R | 25286936 | 2R | 8126924..8127010 | 264..178 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8126732..8128068 | 1601..265 | 6670 | 99.9 | Minus |
2R | 25260384 | 2R | 8126179..8126408 | 2038..1809 | 1135 | 99.5 | Minus |
2R | 25260384 | 2R | 8126466..8126674 | 1808..1600 | 1045 | 100 | Minus |
2R | 25260384 | 2R | 8128264..8128441 | 178..1 | 890 | 100 | Minus |
2R | 25260384 | 2R | 8128123..8128209 | 264..178 | 435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4012470..4012698 | 1809..2037 | 99 | <- | Minus |
chr2R | 4012756..4012962 | 1602..1808 | 100 | <- | Minus |
chr2R | 4013022..4014358 | 265..1601 | 99 | <- | Minus |
chr2R | 4014413..4014498 | 179..264 | 100 | <- | Minus |
chr2R | 4014554..4014731 | 1..178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coilin-RD | 1..1905 | 44..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coil-RD | 1..1905 | 44..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coil-RD | 1..1905 | 44..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coil-RD | 1..1905 | 44..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coilin-RD | 1..2037 | 1..2037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coil-RD | 1..2037 | 1..2037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coil-RD | 1..2037 | 1..2037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coilin-RD | 1..2037 | 1..2037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
coil-RD | 1..2037 | 1..2037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8124981..8125209 | 1809..2037 | 99 | <- | Minus |
2R | 8125267..8125473 | 1602..1808 | 100 | <- | Minus |
2R | 8125533..8126869 | 265..1601 | 99 | <- | Minus |
2R | 8126924..8127009 | 179..264 | 100 | <- | Minus |
2R | 8127065..8127242 | 1..178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8124981..8125209 | 1809..2037 | 99 | <- | Minus |
2R | 8125267..8125473 | 1602..1808 | 100 | <- | Minus |
2R | 8125533..8126869 | 265..1601 | 99 | <- | Minus |
2R | 8126924..8127009 | 179..264 | 100 | <- | Minus |
2R | 8127065..8127242 | 1..178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8124981..8125209 | 1809..2037 | 99 | <- | Minus |
2R | 8125267..8125473 | 1602..1808 | 100 | <- | Minus |
2R | 8125533..8126869 | 265..1601 | 99 | <- | Minus |
2R | 8126924..8127009 | 179..264 | 100 | <- | Minus |
2R | 8127065..8127242 | 1..178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4014429..4014514 | 179..264 | 100 | <- | Minus |
arm_2R | 4014570..4014747 | 1..178 | 100 | Minus | |
arm_2R | 4012486..4012714 | 1809..2037 | 99 | <- | Minus |
arm_2R | 4012772..4012978 | 1602..1808 | 100 | <- | Minus |
arm_2R | 4013038..4014374 | 265..1601 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8126180..8126408 | 1809..2037 | 99 | <- | Minus |
2R | 8126466..8126672 | 1602..1808 | 100 | <- | Minus |
2R | 8126732..8128068 | 265..1601 | 99 | <- | Minus |
2R | 8128123..8128208 | 179..264 | 100 | <- | Minus |
2R | 8128264..8128441 | 1..178 | 100 | Minus |
Translation from 43 to 1947
> FI06021.pep MQHSSMKVDLSNFFKDERRNSLVFIDAAWNNIKDLQDHIQNLFSLKDISL LTSDGCYLPPRESIKVLNSAEGLKAFRFASHDSDTFVSPAPVKSSKKRKN RSVEEQVHLTASTPLRPSKRSKNQNNSEWINIAENPSRVRKKELLDMAPG PSVQSKLLTNKGTPKAPETQTEVSNMSANIETENKESAPQIKNKSKNKKP TKSPEASDQVENEPAPKSISRCTLKEGKMSESKNQETSPDILSEKSGVVT KENETREEQQDKTHLESNKIPDKLSQLKAGDQIEKSPGIAASLLSISFRS PLLEMPFNVPRIFQFPTKKQQIEILEYKKLKPISPRFLLQKGAKSDDTAK QFPSNGKDSTLKPKSYEILHDEELPDVKDKKNVSEGIKRAVAPLCEDIIE TSTTLPGAIGAVESAYLDNSTEAETTLPSEAEATNPLELTESFLQNNTSM EKTPKVEKILPDDGSASPIKNNVDSKDVKTVTVPIFEEQLVSDSDDDVML VDDSNIDVSYGDSDIEPIPVVENRQSLDIIRDLLRTATPLNSLPSRGDTV IFKLLKIKGNANSGTTEFVAGRCTYVNRRTKIVTVETITYPPEIGRMLRQ YYMSGLDESSEDVRTLSIHLKDMLEAKIIVATID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11211-PA | 802 | GF11211-PA | 1..133 | 1..137 | 423 | 61.6 | Plus |
Dana\GF11211-PA | 802 | GF11211-PA | 683..802 | 516..634 | 304 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10675-PA | 606 | GG10675-PA | 1..606 | 1..634 | 1979 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19986-PA | 166 | GH19986-PA | 13..166 | 484..634 | 327 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
coil-PD | 634 | CG8710-PD | 1..634 | 1..634 | 3205 | 100 | Plus |
coil-PE | 633 | CG8710-PE | 1..633 | 1..634 | 3189 | 99.8 | Plus |
coil-PC | 488 | CG8710-PC | 1..488 | 147..634 | 2457 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20273-PA | 487 | GI20273-PA | 1..139 | 1..140 | 363 | 53.6 | Plus |
Dmoj\GI20273-PA | 487 | GI20273-PA | 355..487 | 498..634 | 298 | 42.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17381-PA | 632 | GL17381-PA | 477..629 | 477..630 | 284 | 43.2 | Plus |
Dper\GL17381-PA | 632 | GL17381-PA | 1..125 | 1..127 | 264 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21272-PA | 586 | GA21272-PA | 432..583 | 476..630 | 276 | 40.4 | Plus |
Dpse\GA21272-PA | 586 | GA21272-PA | 1..125 | 1..127 | 264 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20722-PA | 613 | GM20722-PA | 1..613 | 1..634 | 2637 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10190-PA | 442 | GD10190-PA | 1..442 | 176..634 | 1774 | 80.9 | Plus |
Dsim\GD10189-PA | 119 | GD10189-PA | 8..117 | 46..155 | 528 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20226-PA | 525 | GJ20226-PA | 25..297 | 1..326 | 361 | 34.5 | Plus |
Dvir\GJ20226-PA | 525 | GJ20226-PA | 384..525 | 490..634 | 343 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22926-PA | 468 | GK22926-PA | 330..468 | 490..634 | 369 | 49.7 | Plus |
Dwil\GK22926-PA | 468 | GK22926-PA | 1..125 | 1..124 | 331 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23301-PA | 624 | GE23301-PA | 1..624 | 1..634 | 2062 | 69.2 | Plus |
Translation from 43 to 1947
> FI06021.hyp MQHSSMKVDLSNFFKDERRNSLVFIDAAWNNIKDLQDHIQNLFSLKDISL LTSDGCYLPPRESIKVLNSAEGLKAFRFASHDSDTFVSPAPVKSSKKRKN RSVEEQVHLTASTPLRPSKRSKNQNNSEWINIAENPSRVRKKELLDMAPG PSVQSKLLTNKGTPKAPETQTEVSNMSANIETENKESAPQIKNKSKNKKP TKSPEASDQVENEPAPKSISRCTLKEGKMSESKNQETSPDILSEKSGVVT KENETREEQQDKTHLESNKIPDKLSQLKAGDQIEKSPGIAASLLSISFRS PLLEMPFNVPRIFQFPTKKQQIEILEYKKLKPISPRFLLQKGAKSDDTAK QFPSNGKDSTLKPKSYEILHDEELPDVKDKKNVSEGIKRAVAPLCEDIIE TSTTLPGAIGAVESAYLDNSTEAETTLPSEAEATNPLELTESFLQNNTSM EKTPKVEKILPDDGSASPIKNNVDSKDVKTVTVPIFEEQLVSDSDDDVML VDDSNIDVSYGDSDIEPIPVVENRQSLDIIRDLLRTATPLNSLPSRGDTV IFKLLKIKGNANSGTTEFVAGRCTYVNRRTKIVTVETITYPPEIGRMLRQ YYMSGLDESSEDVRTLSIHLKDMLEAKIIVATID*