Clone FI06027 Report

Search the DGRC for FI06027

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:60
Well:27
Vector:pOTB7
Associated Gene/TranscriptAats-trp-RB
Protein status:FI06027.pep: gold
Sequenced Size:1745

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Aats-trp 2008-08-15 Release 5.9 accounting
Aats-trp 2008-12-18 5.12 accounting

Clone Sequence Records

FI06027.complete Sequence

1745 bp assembled on 2008-08-11

GenBank Submission: BT044253.1

> FI06027.complete
GCATAACAATTACCATTAACAGGAGAGCAGATGAAATAATCGATGGTGTA
ATCGATGGTTGGGACACTAATAAGCGCCTCATTTCACATGTGAAGGGCCC
AATTACACTGGCCAGTATTAAATTATCTGTTAAATTCTTAACAATCAGAC
TGACAGAATGGCGGACACCAAGGAGACGGTTGTGGAGGGCGTGGAGGCGT
TGACACTAAATGGAAAACCGGACGCAGAACCCGTGGAAACGGGCACGGAT
GCCCAGGCACAGGAGGGAGCCACTGCACCCACTGAAGATGTTGTGGATCC
ATGGAATGTGGCCAGTAGTAATGACGCGGGCGTCGACTATGATAAGCTGA
TAAAACGGTTTGGCTCCAGCAAAATCGATGAGGAGCTTATCGCGCGTTTC
GAGAAAATCACGGGAAAGCCCGCCCACCACTTCATCCGAAGGGGCATGTT
CTTCTCGCACCGGGATCTTCATACGATTCTAACACTGCGCGAACAGGGCA
AACCCTTCTATTTGTACACTGGTCGCGGTCCCAGTTCCGGATCCCTGCAC
GTGGGCCACCTGGTGCCCTTCATCATGACCAAGTGGCTGCAGGAGACCTT
TGATGTGCCGCTGGTTATTCAATTGACCGACGACGAGAAGACCTTGTGGA
AGGATCTGAAAGTGGAGGATGCCATCAAGCTTGGACGTGAAAACGCCAAG
GATATTGTGGCCATTGGATTCGATGTCAACAAGACGTTCATTTTTAATAA
CCTGGAATTCGTGGGAAAATGTCCTGCCATGTATCAGAACATCATTCGCA
TCCAGAAGTGCGTTACCTTCAATCAGGTCAAGGGCATCTTTGGCTTCGGG
GACTCAGACATCATTGGCAAGATTGGTTTCCCAGCCGCTCAAGCAGCTCC
CGCGATTTCCAGCACCTTCCCCTTCATCTTCGGCAACAGGAAGGTGCACT
GCCTCATCCCGTGCGCCATCGATCAGGACCCATATTTCCGCATGACTCGC
GATGTGGCTCCACGTCTTGGTTTTCCCAAATGCGCGCTCATCCATTCGAC
CTTCTTCCCGGCGCTGCAGGGTGCCAAGACGAAGATGTCGGCTAGCGACC
AGAACTCGGCTGTTTATCTGACGGACACGCCCAAGCAGATTAAGAACAAG
ATCAACAAGTACGCCTTCTCCGGAGGACGCGTATCTGTGGAGGAGCACCG
CAAGCTGGGCGGAGTTCCGGAAGTTGATGTCTCCTATCAGCTGTTGAAGT
TCTTCCTGGAGGACGATGCCAAGTTGGAGGAGGTGAGAGTGGCTTACAGC
AAAGGCGAAATGCTTACGGGCGAGATCAAGAAGCTGGCAGTTGAGACGCT
CACACCCATTGTGGAACAGCATCAGGCCGCCCGCAAGCTGATTACGGACG
AAGTGCTGGACAAGTACTTCGAACTACGACCCCTGAAGTTCGGAAGTTAG
AACGGTAGCCGAATTGAGGTACCTGCATTTGCTTGACATCGATTCTTACT
ACCAGTTTATATGAAATTAGCTTAAATCGAACTAAGCGATATTAGTTTAG
CACCGAACCGACTAAGGCACTTCTATGTAAATAGCTATACAGAATTGATC
TATGCCTTGGCTCTGAGTCCGTGTGGCGCCCACTTAATGCATCGTTGTAC
TCGCTATTTATTTTATTTTTTACACAGCGTGTTTATTTTTATAAAGCAGA
AAACAATAAACTTCGGCTTCGATTTGCAAAAAAAAAAAAAAAAAA

FI06027.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:39
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-trp.a 1918 Aats-trp.a 1..1729 1..1729 8645 100 Plus
Aats-trp-RB 1937 Aats-trp-RB 20..1748 1..1729 8645 100 Plus
Aats-trp-RA 2709 Aats-trp-RA 1..1468 1..1468 7340 100 Plus
Aats-trp-RA 2709 Aats-trp-RA 1467..1501 1695..1729 175 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:32:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5091257..5091837 1345..765 2860 99.5 Minus
chr3R 27901430 chr3R 5091895..5092306 765..354 2045 99.8 Minus
chr3R 27901430 chr3R 5090804..5091187 1727..1344 1920 100 Minus
chr3R 27901430 chr3R 5092373..5092725 353..1 1765 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:15:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9265480..9266060 1345..765 2905 100 Minus
3R 32079331 3R 9266118..9266529 765..354 2060 100 Minus
3R 32079331 3R 9265025..9265410 1729..1344 1930 100 Minus
3R 32079331 3R 9266596..9266948 353..1 1765 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9006311..9006891 1345..765 2905 100 Minus
3R 31820162 3R 9006949..9007360 765..354 2060 100 Minus
3R 31820162 3R 9005856..9006241 1729..1344 1930 100 Minus
3R 31820162 3R 9007427..9007779 353..1 1765 100 Minus
Blast to na_te.dros performed on 2019-03-16 13:32:22 has no hits.

FI06027.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:33:14 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5090804..5091185 1346..1727 100 <- Minus
chr3R 5091257..5091836 766..1345 99 <- Minus
chr3R 5091895..5092306 354..765 99 <- Minus
chr3R 5092373..5092725 1..353 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:52:01 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1293 158..1450 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:41 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1293 158..1450 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:29:31 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1293 158..1450 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:13 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RA 1..1293 158..1450 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:21:06 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1293 158..1450 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:49:01 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1727 1..1727 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:41 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1727 1..1727 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:31 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1683 45..1727 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:29:28 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1727 1..1727 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:21:06 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-trp-RB 1..1683 45..1727 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:33:14 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9265027..9265408 1346..1727 100 <- Minus
3R 9265480..9266059 766..1345 100 <- Minus
3R 9266118..9266529 354..765 100 <- Minus
3R 9266596..9266948 1..353 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:33:14 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9265027..9265408 1346..1727 100 <- Minus
3R 9265480..9266059 766..1345 100 <- Minus
3R 9266118..9266529 354..765 100 <- Minus
3R 9266596..9266948 1..353 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:33:14 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9265027..9265408 1346..1727 100 <- Minus
3R 9265480..9266059 766..1345 100 <- Minus
3R 9266118..9266529 354..765 100 <- Minus
3R 9266596..9266948 1..353 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:31 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5090749..5091130 1346..1727 100 <- Minus
arm_3R 5091202..5091781 766..1345 100 <- Minus
arm_3R 5091840..5092251 354..765 100 <- Minus
arm_3R 5092318..5092670 1..353 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:39:36 Download gff for FI06027.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9006949..9007360 354..765 100 <- Minus
3R 9005858..9006239 1346..1727 100 <- Minus
3R 9006311..9006890 766..1345 100 <- Minus
3R 9007427..9007779 1..353 100   Minus

FI06027.pep Sequence

Translation from 157 to 1449

> FI06027.pep
MADTKETVVEGVEALTLNGKPDAEPVETGTDAQAQEGATAPTEDVVDPWN
VASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGMFFS
HRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDV
PLVIQLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLE
FVGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAI
SSTFPFIFGNRKVHCLIPCAIDQDPYFRMTRDVAPRLGFPKCALIHSTFF
PALQGAKTKMSASDQNSAVYLTDTPKQIKNKINKYAFSGGRVSVEEHRKL
GGVPEVDVSYQLLKFFLEDDAKLEEVRVAYSKGEMLTGEIKKLAVETLTP
IVEQHQAARKLITDEVLDKYFELRPLKFGS*

FI06027.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18421-PA 431 GF18421-PA 1..431 1..430 2175 93.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17386-PA 430 GG17386-PA 1..430 1..430 2261 97.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13981-PA 431 GH13981-PA 1..431 1..430 1967 84 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:56
Subject Length Description Subject Range Query Range Score Percent Strand
TrpRS-PB 430 CG9735-PB 1..430 1..430 2236 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22326-PA 432 GI22326-PA 1..432 1..430 2099 89.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13546-PA 431 GL13546-PA 1..431 1..430 2141 94.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:29:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21996-PA 431 GA21996-PA 1..431 1..430 2141 94.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26274-PA 430 GM26274-PA 1..430 1..430 2267 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20809-PA 430 GD20809-PA 1..430 1..430 2275 98.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10514-PA 430 GJ10514-PA 1..430 1..430 2111 89.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12984-PA 426 GK12984-PA 1..426 1..430 1993 86.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:29:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24790-PA 430 GE24790-PA 1..430 1..430 2277 98.4 Plus

FI06027.hyp Sequence

Translation from 157 to 1449

> FI06027.hyp
MADTKETVVEGVEALTLNGKPDAEPVETGTDAQAQEGATAPTEDVVDPWN
VASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGMFFS
HRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDV
PLVIQLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLE
FVGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAI
SSTFPFIFGNRKVHCLIPCAIDQDPYFRMTRDVAPRLGFPKCALIHSTFF
PALQGAKTKMSASDQNSAVYLTDTPKQIKNKINKYAFSGGRVSVEEHRKL
GGVPEVDVSYQLLKFFLEDDAKLEEVRVAYSKGEMLTGEIKKLAVETLTP
IVEQHQAARKLITDEVLDKYFELRPLKFGS*

FI06027.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-trp-PB 430 CG9735-PB 1..430 1..430 2236 100 Plus