Clone FI06139 Report

Search the DGRC for FI06139

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:61
Well:39
Vector:pOTB7
Associated Gene/TranscriptAPP-BP1-RA
Protein status:FI06139.pep: gold
Sequenced Size:1775

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7828 2008-12-18 5.12 accounting

Clone Sequence Records

FI06139.complete Sequence

1775 bp assembled on 2008-11-04

GenBank Submission: BT050569.1

> FI06139.complete
TAATAGTCAATAAATGTTTTAAATAAGCAACAGTTAAAATTACCAACGTG
TTTTTTCCAACACTCCACCCAATAAACAAATTGTGTCAGAAGTATTGGCT
GCCGGCGCTTTACAGTACTGGATTATTTGCAACCGGCTTATTATTGCACA
AAAATCTAGTGAAATGTCCTCGCCAGCCCCCAAATCGCCGGAGCTTTCGG
ATAAAAGCAAGAAATACGACAGACAAATCAGGCTGTGGGGAGAGCATGGA
CAGACGCTATTGGAGGCAGCCACAGTATGTTTGGTGAATGTTACGGCCGT
CGGCTGTGAAACTGCCAAGGGACTGGTGCTACCCGGTATCGGAGGCTTCA
CTGTGGCCGATGGCAGCACCGTCAAGGAGGAGGATCTGGGCAACAATTTC
TTCCTCGATTCCAGCTATCTGGGCAAATCTAAAGCATTGGCTTGCATGCA
ACTTCTCCAGGAACTCAATCCCGACGTAAATGGCGATTATGTCGACGAGA
GTGCCGACTTTTTGTTAGCCAACAGACCGAACTTCTTCGACAGCTTCGAT
TTAGTGATTGCCTCCAATCTCAATGAGCAGACTTTGCTTCTCTTGGCCGA
ACGGTTATGGGAGCTTAACGTTCCATTAATCTACTGCCGATCGCTTGGCA
TGCTGGGCACAATACGCTTGCAAATACGGGAACACTGCATCGTGGAGGCG
CATCCGGATAATCGACAGTTTGATCTGCGTCTGGAGCATCCATTCGATGC
TTTGCGGGAGCATCTCGACGGCACCGAGGTGACCAGTAAGGTGCCCTGGC
TGCTGGTGCTTCACAAATATCTTAATGTGTGGCAAAAACAACAAGCGGAT
GGGACTCAAACGCCTCGAAATTACAAAGAGAAGAATCAGTTGAAGGAGAC
CATTAGAGAGGAGATGAAGGCGGATGAGGAAAACTATGAAGAGGCCATCA
AGGCGGTCAATACAGCCTTTGGAGCGGGACAGGTTCCCAAAAGCCTGAAA
GCCATATTCGAAGATGATGCCTGCGAACAGTTAAACAAGAAGAGCAACGT
CTTTTGGATCATGGCCAAGGCCCTAAAGCACTTTGTGATACATGAGAATG
AGGGCCATCTCCCTCTGCCTGGCGTTCTGCCGGACATGACTGCCAATACG
GACTCCTATATCGCCCTGCAGCACATCTACCGCCAACAGGCGCTGCAAGA
CGCCGACCAGGTGTATCACAAGTGCCAGGAGTACCTTAAGCAGTTGGCTT
TGCCTGCCGACAGCATTGATGAGAGAAGTGTGCGTCTCATTTGCAAAGAA
GCAGCCGGACTGGCGGTCATAAGGGGTACACGCATTGCAGAGGAGTACGA
GAAGAGCAGTCGCCTGCTACCACTGGTTGAGGACAACGAGCTGCAGGGCA
ACCTCACGGCATACAACTTTGCGCTGCGCGCCTACGAGCGCTTCCTCAGC
GAGTGTGGCAACATTCCCGGCGAGTGCATCGTTGAGCAGGACATTGGACG
TCTGAAGAGCATTGCCGCCAAGATGCTAAGCGATTTGGGCATGCACGCCA
CCATCAGCGATGATGTTCTGCACGAGATTTGTCGATATGGCGGAGCTGAG
TTGCATGCAGTGTCTGCTTTTATTGGTGGCTGCGCTGCCCAGGAGGTGAT
CAAGATCATTACGAAGCAATACAAGCCAATCGATAATACTTTTATATACA
ATGCTATAACCACAGAAAGTGTCACATTGAAGCTATAAACAAATGGTATT
TTCATAGAAAAAAAAAAAAAAAAAA

FI06139.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:12:34
Subject Length Description Subject Range Query Range Score Percent Strand
APP-BP1.f 2866 APP-BP1.f 1021..2780 1..1760 8665 99.4 Plus
APP-BP1.e 2614 APP-BP1.e 787..2546 1..1760 8665 99.4 Plus
APP-BP1.a 2058 APP-BP1.a 231..1990 1..1760 8665 99.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:05:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11089913..11090558 397..1042 3140 99.1 Plus
chr3L 24539361 chr3L 11090624..11090959 1041..1376 1680 100 Plus
chr3L 24539361 chr3L 11091021..11091272 1376..1627 1260 100 Plus
chr3L 24539361 chr3L 11089404..11089635 1..232 1145 99.6 Plus
chr3L 24539361 chr3L 11089690..11089856 230..396 835 100 Plus
chr3L 24539361 chr3L 11091329..11091461 1625..1757 650 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
pncr011:3L-RA 874 CR33947-RA 836..874 1..39 195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:05:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11099031..11099676 397..1042 3155 99.2 Plus
3L 28110227 3L 11099741..11100076 1041..1376 1680 100 Plus
3L 28110227 3L 11100138..11100389 1376..1627 1230 99.2 Plus
3L 28110227 3L 11098522..11098753 1..232 1145 99.6 Plus
3L 28110227 3L 11098808..11098974 230..396 835 100 Plus
3L 28110227 3L 11100446..11100581 1625..1760 665 99.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11092131..11092776 397..1042 3155 99.2 Plus
3L 28103327 3L 11092841..11093176 1041..1376 1680 100 Plus
3L 28103327 3L 11093238..11093489 1376..1627 1230 99.2 Plus
3L 28103327 3L 11091622..11091853 1..232 1145 99.5 Plus
3L 28103327 3L 11091908..11092074 230..396 835 100 Plus
3L 28103327 3L 11093546..11093681 1625..1760 665 99.2 Plus
Blast to na_te.dros performed on 2019-03-15 21:05:51 has no hits.

FI06139.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:06:56 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11091022..11091270 1377..1625 100 -> Plus
chr3L 11091330..11091461 1626..1757 99   Plus
chr3L 11090626..11090959 1043..1376 100 -> Plus
chr3L 11089404..11089634 1..231 99 -> Plus
chr3L 11089692..11089856 232..396 100 -> Plus
chr3L 11089913..11090558 397..1042 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:52:22 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
CG7828-RA 1..1575 164..1738 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:18:20 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
APP-BP1-RA 1..1575 164..1738 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:37:32 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
APP-BP1-RB 1..1575 164..1738 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:43:29 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
APP-BP1-RB 1..1575 164..1738 99   Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:16:11 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
pncr011:3L-RA 836..874 1..39 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:58:44 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
CG7828-RA 111..1867 1..1757 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:18:20 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
APP-BP1-RA 111..1867 1..1757 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:37:32 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
APP-BP1-RA 111..1867 1..1757 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-11-04 16:28:28 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
CG7828-RA 111..1867 1..1757 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:29 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
APP-BP1-RA 111..1867 1..1757 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:06:56 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11098522..11098752 1..231 99 -> Plus
3L 11098810..11098974 232..396 100 -> Plus
3L 11099031..11099676 397..1042 99 -> Plus
3L 11099743..11100076 1043..1376 100 -> Plus
3L 11100139..11100387 1377..1625 99 -> Plus
3L 11100447..11100578 1626..1757 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:06:56 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11098522..11098752 1..231 99 -> Plus
3L 11098810..11098974 232..396 100 -> Plus
3L 11099031..11099676 397..1042 99 -> Plus
3L 11099743..11100076 1043..1376 100 -> Plus
3L 11100139..11100387 1377..1625 99 -> Plus
3L 11100447..11100578 1626..1757 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:06:56 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11098522..11098752 1..231 99 -> Plus
3L 11098810..11098974 232..396 100 -> Plus
3L 11099031..11099676 397..1042 99 -> Plus
3L 11099743..11100076 1043..1376 100 -> Plus
3L 11100139..11100387 1377..1625 99 -> Plus
3L 11100447..11100578 1626..1757 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:37:32 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11091622..11091852 1..231 99 -> Plus
arm_3L 11091910..11092074 232..396 100 -> Plus
arm_3L 11092131..11092776 397..1042 99 -> Plus
arm_3L 11092843..11093176 1043..1376 100 -> Plus
arm_3L 11093239..11093487 1377..1625 99 -> Plus
arm_3L 11093547..11093678 1626..1757 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:49:32 Download gff for FI06139.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11091910..11092074 232..396 100 -> Plus
3L 11091622..11091852 1..231 99 -> Plus
3L 11092131..11092776 397..1042 99 -> Plus
3L 11092843..11093176 1043..1376 100 -> Plus
3L 11093239..11093487 1377..1625 99 -> Plus
3L 11093547..11093678 1626..1757 99   Plus

FI06139.pep Sequence

Translation from 163 to 1737

> FI06139.pep
MSSPAPKSPELSDKSKKYDRQIRLWGEHGQTLLEAATVCLVNVTAVGCET
AKGLVLPGIGGFTVADGSTVKEEDLGNNFFLDSSYLGKSKALACMQLLQE
LNPDVNGDYVDESADFLLANRPNFFDSFDLVIASNLNEQTLLLLAERLWE
LNVPLIYCRSLGMLGTIRLQIREHCIVEAHPDNRQFDLRLEHPFDALREH
LDGTEVTSKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQLKETIREE
MKADEENYEEAIKAVNTAFGAGQVPKSLKAIFEDDACEQLNKKSNVFWIM
AKALKHFVIHENEGHLPLPGVLPDMTANTDSYIALQHIYRQQALQDADQV
YHKCQEYLKQLALPADSIDERSVRLICKEAAGLAVIRGTRIAEEYEKSSR
LLPLVEDNELQGNLTAYNFALRAYERFLSECGNIPGECIVEQDIGRLKSI
AAKMLSDLGMHATISDDVLHEICRYGGAELHAVSAFIGGCAAQEVIKIIT
KQYKPIDNTFIYNAITTESVTLKL*

FI06139.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23890-PA 524 GF23890-PA 1..524 1..524 2631 91 Plus
Dana\GF17042-PA 339 GF17042-PA 22..179 18..178 194 31.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15477-PA 524 GG15477-PA 1..524 1..524 2737 96.4 Plus
Dere\GG17124-PA 337 GG17124-PA 22..179 18..178 190 30.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15185-PA 519 GH15185-PA 1..519 1..524 2411 84 Plus
Dgri\GH23591-PA 337 GH23591-PA 22..179 18..178 189 30.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
APP-BP1-PA 524 CG7828-PA 1..524 1..524 2718 100 Plus
APP-BP1-PB 524 CG7828-PB 1..524 1..524 2718 100 Plus
Aos1-PA 337 CG12276-PA 18..179 14..178 188 29.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:41:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12125-PA 525 GI12125-PA 1..525 1..524 2431 84.8 Plus
Dmoj\GI10362-PA 337 GI10362-PA 13..179 10..178 200 31.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:41:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25218-PA 524 GL25218-PA 1..524 1..524 2516 87.2 Plus
Dper\GL27174-PA 340 GL27174-PA 24..181 18..178 200 31.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:41:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20612-PA 524 GA20612-PA 1..524 1..524 2510 87 Plus
Dpse\GA11527-PA 340 GA11527-PA 24..181 18..178 204 31.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:41:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25249-PA 524 GM25249-PA 1..524 1..524 2781 98.7 Plus
Dsec\GM26007-PA 337 GM26007-PA 22..179 18..178 189 29.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14283-PA 524 GD14283-PA 1..524 1..524 2797 99.2 Plus
Dsim\GD20565-PA 337 GD20565-PA 22..179 18..178 190 29.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13397-PA 519 GJ13397-PA 1..519 1..524 2386 83.8 Plus
Dvir\GJ22581-PA 337 GJ22581-PA 22..179 18..178 189 31.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12324-PA 498 GK12324-PA 1..498 1..498 2343 85.9 Plus
Dwil\GK12842-PA 342 GK12842-PA 13..181 8..178 185 31 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:42:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21787-PA 524 GE21787-PA 1..524 1..524 2744 96.9 Plus
Dyak\GE24516-PA 337 GE24516-PA 22..179 18..178 192 30.7 Plus

FI06139.hyp Sequence

Translation from 163 to 1737

> FI06139.hyp
MSSPAPKSPELSDKSKKYDRQIRLWGEHGQTLLEAATVCLVNVTAVGCET
AKGLVLPGIGGFTVADGSTVKEEDLGNNFFLDSSYLGKSKALACMQLLQE
LNPDVNGDYVDESADFLLANRPNFFDSFDLVIASNLNEQTLLLLAERLWE
LNVPLIYCRSLGMLGTIRLQIREHCIVEAHPDNRQFDLRLEHPFDALREH
LDGTEVTSKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQLKETIREE
MKADEENYEEAIKAVNTAFGAGQVPKSLKAIFEDDACEQLNKKSNVFWIM
AKALKHFVIHENEGHLPLPGVLPDMTANTDSYIALQHIYRQQALQDADQV
YHKCQEYLKQLALPADSIDERSVRLICKEAAGLAVIRGTRIAEEYEKSSR
LLPLVEDNELQGNLTAYNFALRAYERFLSECGNIPGECIVEQDIGRLKSI
AAKMLSDLGMHATISDDVLHEICRYGGAELHAVSAFIGGCAAQEVIKIIT
KQYKPIDNTFIYNAITTESVTLKL*

FI06139.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:21:28
Subject Length Description Subject Range Query Range Score Percent Strand
APP-BP1-PA 524 CG7828-PA 1..524 1..524 2718 100 Plus
APP-BP1-PB 524 CG7828-PB 1..524 1..524 2718 100 Plus
Aos1-PA 337 CG12276-PA 18..179 14..178 188 29.9 Plus