Clone FI06213 Report

Search the DGRC for FI06213

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:62
Well:13
Vector:pOTB7
Associated Gene/TranscriptCG6220-RA
Protein status:FI06213.pep: gold
Sequenced Size:1374

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6220 2008-08-15 Release 5.9 accounting
CG6220 2008-12-18 5.12 accounting

Clone Sequence Records

FI06213.complete Sequence

1374 bp assembled on 2008-08-14

GenBank Submission: BT044265.1

> FI06213.complete
CAGAATCGGAGTGCGTATCGTTAAAAAAAAAATATATAAATTTTAACAAG
CTAGAATTTGAGTGTGCGAATTAAGCGTGAAAAACAACCGAAATGGATCC
TATTCTAAAGACCCTTACCGAGACCATGACCGTGGAGGCCATCGCAATCA
TCAAGGCCAAGCGCTTGGCGATGAAGCAGAGCGTCGATAAGAACGCCATG
CAGATGAGGGCCCAGGAGCGGGAGAAGGGTCGTAATTTGGATAACATGCA
AAAGGAACTGGGCAGGCGGGCCATGAAGCGGGAGCGACCGTGCCGCGTTT
TCGAGGAGCAGCTGCTGGGCGAGAAGGAGATGACGACTGCTCAGGAATAC
CTCAAACTGGCTCACCATTCCATGATGCGTAGCTTGGACTCTACGGTGCC
GGAATTATCACAGCTGGAAATGCCGCCCCCGCCGGAGATCATGACAGAGC
CGCCTTGGCCAAAGACCAAGTACAATCGCTATGGCCAGGAGAAATTCCTC
AAGGCACAGCAGGAGTTCGGCATAAATCCGCAGGGCAGCAACTTGGAGAA
TTGCGCGACTTTTCACGAAAGTCAAAAGGACAAGCGCAACCGATCTGTGA
GTAGGGAAAGCATTGAAAGGTCGAGAAGCAACAGCAAGGATCGTCGCTCA
TCGAAGCTTTACGCACGAATGCCCATCATTGTGGTTCCGGATGCAATGAC
CAGCATGATCAGCCTGAACAATATCAAGACACTGCTCGAGGAGTTGCACT
ACGAGCCAGAGCGTAACGGCCGGCAGTCTAACCCTCCTGAGTGTCGGCCC
AAGGAGGTCATAGTCGAGCATCGATTTCAGAACGAGCTTGTTAGCTACCG
GGTCATCGACAACGTGACCAACCTAACACCCGTCGAATGGGATCGGGTGG
TCGCCGTGTTCGCCATGGGACCCAAGTGGCAATTCAAGGGCTGGCCGGAT
GGCGCTGACCCCGCCGCCATCTTCCACAAGGTCTGCGCCTTCCATCTGCA
CTTTAGGAATACGCCGATGTGCCCGGAGCTGACCAAGCTGCAGGTGCACT
CACTGGCTCTCTCGCCCACCGAGCGCCATTCGGACAGCGGCATCATTATG
GAGTTCTGGAACAGAGTGGACCGACACATGGCCGTCCATGCCCGTCAGTT
TGCGTTTATCTGGCAAAAGTAGGGTTCTTGTGATTACATTCCCCCTGGCG
CACATACATACATAGATGCCAGATAAGCAGGGAAATCAATAAGTGAAATT
GAATAAGCCAGAACAAAGGACGAAGGACAAAGAGTGACAACACACACGCA
CACACACGCACACACACACACACACACACACAAACACTAAATAAAAATAA
AAAACAAAAAAAAAAAAAAAAAAA

FI06213.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG6220-RA 1528 CG6220-RA 20..1357 1..1337 6560 99.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9579839..9580669 830..1 4105 99.9 Minus
chr2R 21145070 chr2R 9579096..9579609 1337..824 2540 99.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:16:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13692538..13693368 830..1 4045 99.4 Minus
2R 25286936 2R 13691795..13692308 1337..824 2540 99.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13693737..13694567 830..1 4055 99.3 Minus
2R 25260384 2R 13692994..13693507 1337..824 2540 99.6 Minus
Blast to na_te.dros performed on 2019-03-15 23:34:46 has no hits.

FI06213.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:35:34 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9579144..9579602 831..1289 100 <- Minus
chr2R 9579839..9580669 1..830 96   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:52:30 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 1..1080 93..1172 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:06:45 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 1..1080 93..1172 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:50:59 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 1..1080 93..1172 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:18 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 1..1080 93..1172 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:40:41 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 1..1080 93..1172 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:31:39 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 2..1334 1..1332 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:06:45 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 2..1334 1..1332 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:50:59 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 2..1339 1..1337 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:28:31 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 2..1334 1..1332 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:40:41 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
CG6220-RA 2..1339 1..1337 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:35:34 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13691792..13692301 831..1339 99 <- Minus
2R 13692538..13693368 1..830 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:35:34 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13691792..13692301 831..1339 99 <- Minus
2R 13692538..13693368 1..830 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:35:34 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13691792..13692301 831..1339 99 <- Minus
2R 13692538..13693368 1..830 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:50:59 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9579297..9579806 831..1339 99 <- Minus
arm_2R 9580043..9580873 1..830 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:35:50 Download gff for FI06213.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13692991..13693500 831..1339 99 <- Minus
2R 13693737..13694567 1..830 99   Minus

FI06213.pep Sequence

Translation from 92 to 1171

> FI06213.pep
MDPILKTLTETMTVEAIAIIKAKRLAMKQSVDKNAMQMRAQEREKGRNLD
NMQKELGRRAMKRERPCRVFEEQLLGEKEMTTAQEYLKLAHHSMMRSLDS
TVPELSQLEMPPPPEIMTEPPWPKTKYNRYGQEKFLKAQQEFGINPQGSN
LENCATFHESQKDKRNRSVSRESIERSRSNSKDRRSSKLYARMPIIVVPD
AMTSMISLNNIKTLLEELHYEPERNGRQSNPPECRPKEVIVEHRFQNELV
SYRVIDNVTNLTPVEWDRVVAVFAMGPKWQFKGWPDGADPAAIFHKVCAF
HLHFRNTPMCPELTKLQVHSLALSPTERHSDSGIIMEFWNRVDRHMAVHA
RQFAFIWQK*

FI06213.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11166-PA 351 GF11166-PA 1..348 1..356 789 48.8 Plus
Dana\GF16578-PA 537 GF16578-PA 167..537 1..355 430 31.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22473-PA 363 GG22473-PA 1..363 1..359 1119 59.5 Plus
Dere\GG14760-PA 538 GG14760-PA 167..538 1..355 429 31.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19383-PA 539 GH19383-PA 168..539 1..355 419 31.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG6220-PA 359 CG6220-PA 1..359 1..359 1893 100 Plus
hyx-PB 538 CG11990-PB 170..530 5..347 440 31.3 Plus
hyx-PA 538 CG11990-PA 170..530 5..347 440 31.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22586-PA 541 GI22586-PA 168..532 1..346 418 31.1 Plus
Dmoj\GI20980-PA 636 GI20980-PA 472..623 192..346 327 41.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12117-PA 540 GL12117-PA 167..540 1..355 433 31.7 Plus
Dper\GL17469-PA 280 GL17469-PA 191..266 280..356 186 41.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11316-PA 540 GA11316-PA 167..540 1..355 433 31.7 Plus
Dpse\GA24204-PA 352 GA24204-PA 131..343 113..356 422 36.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20257-PA 367 GM20257-PA 1..367 1..359 1387 73.3 Plus
Dsec\GM23781-PA 538 GM23781-PA 167..532 1..349 431 31.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25743-PA 367 GD25743-PA 1..367 1..359 1387 72.5 Plus
Dsim\GD18591-PA 538 GD18591-PA 167..532 1..349 431 31.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10306-PA 540 GJ10306-PA 168..540 1..355 424 31.5 Plus
Dvir\GJ20699-PA 536 GJ20699-PA 371..532 192..355 343 43 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17947-PA 362 GK17947-PA 8..362 6..359 628 41.3 Plus
Dwil\GK11679-PA 545 GK11679-PA 167..545 1..355 459 31.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:41:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13343-PA 368 GE13343-PA 1..368 1..359 1146 62.2 Plus
Dyak\GE25925-PA 538 GE25925-PA 167..538 1..355 429 31.2 Plus

FI06213.hyp Sequence

Translation from 92 to 1171

> FI06213.hyp
MDPILKTLTETMTVEAIAIIKAKRLAMKQSVDKNAMQMRAQEREKGRNLD
NMQKELGRRAMKRERPCRVFEEQLLGEKEMTTAQEYLKLAHHSMMRSLDS
TVPELSQLEMPPPPEIMTEPPWPKTKYNRYGQEKFLKAQQEFGINPQGSN
LENCATFHESQKDKRNRSVSRESIERSRSNSKDRRSSKLYARMPIIVVPD
AMTSMISLNNIKTLLEELHYEPERNGRQSNPPECRPKEVIVEHRFQNELV
SYRVIDNVTNLTPVEWDRVVAVFAMGPKWQFKGWPDGADPAAIFHKVCAF
HLHFRNTPMCPELTKLQVHSLALSPTERHSDSGIIMEFWNRVDRHMAVHA
RQFAFIWQK*

FI06213.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:21:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG6220-PA 359 CG6220-PA 1..359 1..359 1893 100 Plus
hyx-PB 538 CG11990-PB 170..530 5..347 440 31.3 Plus
hyx-PA 538 CG11990-PA 170..530 5..347 440 31.3 Plus