Clone FI06410 Report

Search the DGRC for FI06410

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:64
Well:10
Vector:pOT2
Associated Gene/TranscriptCG13577-RB
Protein status:FI06410.pep: gold
Sequenced Size:1799

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13577 2008-12-18 5.12 accounting

Clone Sequence Records

FI06410.complete Sequence

1799 bp assembled on 2008-10-31

GenBank Submission: BT050485.1

> FI06410.complete
CTCGTGCTTGACGCACGTGTTTTCTTCTTTCCGAACTTTTCAGTTCAGAG
AATTGATTTCGATAAAACGCGATGTCAAAGCGCTGCTGGAACCGCAACCA
GCGCTCGGTGTCCCTGCCCAGGAGCGAATTCGTCGAAATAAACCCCATGA
TGCCCGGCAGGAGCACCGCAGCTGAAGGCGCACGCGGGAGAGCATCATCC
GGACCTCGGATGACCGTGGAGACCCTGTTCCATACTTCTCACTCGGCGAA
GAAGGAGCGTCCACAGCAGGGTGCAAAACCCATGGAAAACCGAGTTTTGA
AGGAAAGCTCCACGTCTAAGAATTCGCGTGAGATGCCTTCTCTGCTACTC
TCCACCAAGGGCAGGCCAGATGGCACTTGGAATAATATGAGAGCCAAGGA
AAACAAGCAGCATCGCAAAGAAGGGAGTCGCCACCTGGCTGCAACTTCCA
CGATGCCCAAGATGGATGAGCTTGGACCCGACTGGCGAAAACCTTGGCCG
ATCGGCGGTTTTTCTCGGAATAATCGTAGTAGCCCTCAGATGTTCAGTAC
AGTTCCTTCGAAAAGTTCTGTTAACATTTCAAGAGACAACAACAATTATC
CCGATTTAAAAATAGAAGACACTGGGAAAAAGAGCCACACAGTCACAGGA
AAGGCACCGAACACGCGTGCAGAAGATCAAAGGTCAGGAATGGTGGCCCA
TCTAAGCGGTCTAAATAGCAAGACTAAGCACACGAGGCTGATGAGTACTT
CCAAGCGCTGCAAAGCAGGTTCGGAAGATTCTGTTTACCATCAGACCCTG
AATGATGTCATCTCCCAGTGGGATTGCCAGCCGTCGACCAGTAAAAGTAA
TCCATGCCAGATTCCGAAGATTCCGAATCTGCCGTCCGGATGGACAGCTT
CGCCGAGCAAAGACGCGGACTTCCCTTTCATGGCGGATCTGGAAAATAGG
ATGGGGGTCGAAAGTCTGATGCCCGAGCTGCTGACTCCATCGCGCACCTC
CCAGCCGCTGACAAAGAATTCTCCGCCTTGGGACTTGTATGCCTTGATGG
GCAACGACGACAAATTTCCGCTTAGCATCTGCACCGATGAGAGATCCAAA
AATGATCCATTGTGGGGCTCCACTTGCATTAACTGGGAAGAAAGCAGCGG
CAGGAACTTGGACTTGAACCACGTCTGCGAGAGGGCCTTGGGAAAATTCC
CAGGCCCATCTGCTACTCCGGGAAACGTGGAAGATTGGCAGGCCATCGAG
ACTATTTGCATGCGTTTGAGGGGCTTCGATATGCCGGGCGACCTGGGTGT
TCTGATGGAACCTCCATCCTTGGATGATGTACTCGAGGTTATCGGGGACT
TGGAGGCGGAGAACAAGAAGGATCTGAAGAATTAGTTGCATATATGTGTA
AATCATGCTGAGTATAACTTCAGCCAAAGGAAAAATGACACTAGAAATAC
CAAAACTTTTTTTTATAAATATTTTTCAAAATTTTTCGAAACGAGACACG
TGATTATCCGCCGATCTATTTAATATTTGAGAAAAATCTGTATGTAAGAA
CCTGTGCATTTCTATTCCCCAAAACCAATAGTGCTTCCATACAACTGATA
CAAAAAACTGGTGAATTCTGCCAAGTTAGGCAAATATTTTATACCATTTC
ACTGACTCCCAGCATTTTTCCCCAGCTTGTAACAATAAATACTGTGTGCA
GCTGCAGCAACAATAGCTGGGAAAAACAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI06410.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:12:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG13577-RB 1961 CG13577-RB 102..1830 1..1728 8605 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 20153403..20155057 1727..74 8150 99.6 Minus
chr2R 21145070 chr2R 20155116..20155186 74..4 355 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:16:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:38:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24267376..24269031 1728..74 8230 99.9 Minus
2R 25286936 2R 24269090..24269163 74..1 370 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 24268575..24270230 1728..74 8240 99.9 Minus
2R 25260384 2R 24270289..24270362 74..1 370 100 Minus
Blast to na_te.dros performed on 2019-03-16 13:38:05 has no hits.

FI06410.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:38:43 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 20153403..20155056 75..1727 97 <- Minus
chr2R 20155116..20155189 1..74 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:52:45 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RB 1..1314 72..1385 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:17:49 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RB 1..1314 72..1385 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:49:58 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RB 1..1314 72..1385 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:16:11 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RB 1..1314 72..1385 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:57:56 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RB 1..1728 1..1727 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:17:49 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RB 1..1728 1..1727 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:49:58 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RB 17..1744 1..1727 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-31 09:52:10 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RA 1..1279 147..1425 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:16:11 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
CG13577-RB 17..1744 1..1727 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:38:43 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24267377..24269030 75..1727 99 <- Minus
2R 24269090..24269163 1..74 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:38:43 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24267377..24269030 75..1727 99 <- Minus
2R 24269090..24269163 1..74 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:38:43 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24267377..24269030 75..1727 99 <- Minus
2R 24269090..24269163 1..74 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:49:58 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20154900..20156553 75..1727 99 <- Minus
arm_2R 20156613..20156686 1..74 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:48:58 Download gff for FI06410.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24268594..24270247 75..1727 99 <- Minus
2R 24270307..24270380 1..74 100   Minus

FI06410.pep Sequence

Translation from 71 to 1384

> FI06410.pep
MSKRCWNRNQRSVSLPRSEFVEINPMMPGRSTAAEGARGRASSGPRMTVE
TLFHTSHSAKKERPQQGAKPMENRVLKESSTSKNSREMPSLLLSTKGRPD
GTWNNMRAKENKQHRKEGSRHLAATSTMPKMDELGPDWRKPWPIGGFSRN
NRSSPQMFSTVPSKSSVNISRDNNNYPDLKIEDTGKKSHTVTGKAPNTRA
EDQRSGMVAHLSGLNSKTKHTRLMSTSKRCKAGSEDSVYHQTLNDVISQW
DCQPSTSKSNPCQIPKIPNLPSGWTASPSKDADFPFMADLENRMGVESLM
PELLTPSRTSQPLTKNSPPWDLYALMGNDDKFPLSICTDERSKNDPLWGS
TCINWEESSGRNLDLNHVCERALGKFPGPSATPGNVEDWQAIETICMRLR
GFDMPGDLGVLMEPPSLDDVLEVIGDLEAENKKDLKN*

FI06410.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19942-PA 492 GG19942-PA 33..492 2..437 1079 54.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG13577-PB 437 CG13577-PB 1..437 1..437 2341 100 Plus
CG13577-PC 231 CG13577-PC 1..231 207..437 1252 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11844-PA 436 GM11844-PA 1..436 1..437 1617 72.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:43:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11471-PA 478 GE11471-PA 29..478 1..437 1012 50.2 Plus

FI06410.hyp Sequence

Translation from 71 to 1384

> FI06410.hyp
MSKRCWNRNQRSVSLPRSEFVEINPMMPGRSTAAEGARGRASSGPRMTVE
TLFHTSHSAKKERPQQGAKPMENRVLKESSTSKNSREMPSLLLSTKGRPD
GTWNNMRAKENKQHRKEGSRHLAATSTMPKMDELGPDWRKPWPIGGFSRN
NRSSPQMFSTVPSKSSVNISRDNNNYPDLKIEDTGKKSHTVTGKAPNTRA
EDQRSGMVAHLSGLNSKTKHTRLMSTSKRCKAGSEDSVYHQTLNDVISQW
DCQPSTSKSNPCQIPKIPNLPSGWTASPSKDADFPFMADLENRMGVESLM
PELLTPSRTSQPLTKNSPPWDLYALMGNDDKFPLSICTDERSKNDPLWGS
TCINWEESSGRNLDLNHVCERALGKFPGPSATPGNVEDWQAIETICMRLR
GFDMPGDLGVLMEPPSLDDVLEVIGDLEAENKKDLKN*

FI06410.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG13577-PB 437 CG13577-PB 1..437 1..437 2341 100 Plus
CG13577-PC 231 CG13577-PC 1..231 207..437 1252 100 Plus