Clone FI06419 Report

Search the DGRC for FI06419

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:64
Well:19
Vector:pOT2
Associated Gene/TranscriptGr98a-RA
Protein status:FI06419.pep: gold
Sequenced Size:1765

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Gr98a 2008-12-18 5.12 accounting

Clone Sequence Records

FI06419.complete Sequence

1765 bp assembled on 2008-11-04

GenBank Submission: BT050571.1

> FI06419.complete
TTCCCTCTAACATATTCATTGGATGAGTTCCCTGCACGATAACAGCAATT
AGCCAATTACAAAACAGAAACCGCTGAAAGGACCTTAGGGGTAATTTTCA
GTAATGGAACAAATGTCGGGAGAACTGCACGCTGCCTCGTTGCTTTACAT
GCGGCGACTGATGAAGTGTTTGGGAATGCTGCCTTTCGGTCAGAATCTGT
TCTCGAAAGGGTTTTGCTATGTGCTACTCTTTGTGTCACTGGGATTTTCG
AGCTACTGGCGCTTCAGCTTCGATTATGAATTTGACTATGATTTCCTAAA
CGATCGATTCTCCAGCACCATCGACCTGAGCAACTTTGTTGCCCTAGTTT
TGGGTCATGCTATTATCGTATTGGAGCTATTGTGGGGAAATTGCAGCAAG
GATGTGGATAGGCAACTGCAGGCGATCCATTCCCAAATAAAACTGCAACT
GGGTACTTCGAATAGCACGGATCGTGTGCGGAGATACTGCAATTGGATCT
ATGGATCCCTAATCATACGATGGCTAATATTTATCGTGGTGACTATATAT
AGTAATCGTGCTCTTACCATTAACGCCACCTACTCGGAATTGGTTTTCCT
GGCTCGTTTTTCCGAGTTCACACTGTACTGTGCTGTGATTTTGTTTATTT
ATCAAGAACTTATCGTTGGAGGCTCCAATGTTCTGGATGAATTGTACAGA
ACCCGATATGAGATGTGGTCCATACGCCGTTTATCCCTGCAGAAATTGGC
CAAGTTACAGGCAATCCATAACTCTTTGTGGCAGGCTATCCGTTGTCTGG
AGTGCTACTTTCAACTGAGCCTGATCACACTGCTCATGAAGTTCTTCATC
GATACTTCTGCTTTGCCATACTGGCTCTACCTCAGCAGAGTTGAGCACAC
AAGGGTGGCTGTGCAGCACTACGTCGCTACGGTTGAGTGCATCAAACTCT
TAGAGATTGTAGTGCCCTGCTATCTCTGCACGCGATGTGATGCAATGCAG
CGAAAGTTCCTATCGATGTTCTACACAGTCACTACCGATCGACGTAGTAG
TCAACTAAATGCAGCTCTAAGAAGTCTAAACCTTCAGTTGAGTCAGGAGA
AATATAAATTTAGTGCCGGAGGAATGGTGGACATAAACACAGAAATGCTG
GGAAAGTTCTTTTTTGGAATGATCAGCTATATTGTAATCTGCATTCAGTT
CAGCATCAACTTCAGGGCCAAAAAAATGAGCAATGAGCAAATGAGTCAAA
ACATCACATCCACAAGTGCCCCCATTTAAATGACCTCTTCGAATCGATTA
TTGTTGAGCAGTCTAGTCGCGTGCTTATTAAATTAAAGTCAATTAACCTA
ATTAGCAAAATTGATGTCTGCCCGTGCATAATCAAAAAAGGACAAGGGGC
AATCAGAGCAGCAGCAAGCAACAGCAGCTGGCCGAAAGTCTACTTCACAT
AATTATTCATGCTTAAAAATTCTATTATAAACTTTTGCCAACGGCCACTG
ACCGTTCGTGTAGGATTCAGGATTCTGGACTAAGGACGCGGGGAGGTCCT
GGGGATACTTATGCTCATGGCTTGGGCTTGTTGGCAACGCATGGCCAATC
TGTCAGGGGTTCATACGTAAACTAATGTTTTTGAAAGATACACTTTTACA
GTGACTTGTTTCCATTATATCTCATTTAATAGAAAAACATTTAATAGAAT
AAACATTTTAATAAATGAATGTATATTCTGTCAGCTTTCTGAGAAAAAAA
AAAAAAAAAAAAAAA

FI06419.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:12:36
Subject Length Description Subject Range Query Range Score Percent Strand
Gr98a.b 1844 Gr98a.b 164..1844 1..1681 8405 100 Plus
Gr98a.a 1728 Gr98a.a 48..1728 1..1681 8405 100 Plus
Gr98a.c 2797 Gr98a.c 1117..2797 1..1681 8405 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:55:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 23311014..23311933 1..920 4600 100 Plus
chr3R 27901430 chr3R 23312291..23312879 1155..1743 2945 100 Plus
chr3R 27901430 chr3R 23312001..23312236 921..1156 1180 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:16:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27488103..27489022 1..920 4600 100 Plus
3R 32079331 3R 27489380..27489970 1155..1745 2955 100 Plus
3R 32079331 3R 27489090..27489325 921..1156 1180 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:30:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 27228934..27229853 1..920 4600 100 Plus
3R 31820162 3R 27230211..27230801 1155..1745 2955 100 Plus
3R 31820162 3R 27229921..27230156 921..1156 1180 100 Plus
Blast to na_te.dros performed on 2019-03-15 16:55:04 has no hits.

FI06419.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:55:44 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 23311014..23311933 1..920 100 -> Plus
chr3R 23312001..23312236 921..1156 100 -> Plus
chr3R 23312293..23312879 1157..1743 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:52:49 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 1..1176 104..1279 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:18:23 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 1..1176 104..1279 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:24:40 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 1..1176 104..1279 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:21:26 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 1..1176 104..1279 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:58:48 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 1..1176 104..1279 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:18:23 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 177..1919 1..1743 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:24:40 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 177..1919 1..1743 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-11-04 16:31:08 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 1..1176 104..1279 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:21:26 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
Gr98a-RA 177..1919 1..1743 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:44 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27488103..27489022 1..920 100 -> Plus
3R 27489090..27489325 921..1156 100 -> Plus
3R 27489382..27489968 1157..1743 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:44 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27488103..27489022 1..920 100 -> Plus
3R 27489090..27489325 921..1156 100 -> Plus
3R 27489382..27489968 1157..1743 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:44 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27488103..27489022 1..920 100 -> Plus
3R 27489090..27489325 921..1156 100 -> Plus
3R 27489382..27489968 1157..1743 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:24:40 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23314812..23315047 921..1156 100 -> Plus
arm_3R 23313825..23314744 1..920 100 -> Plus
arm_3R 23315104..23315690 1157..1743 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:49:35 Download gff for FI06419.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27228934..27229853 1..920 100 -> Plus
3R 27229921..27230156 921..1156 100 -> Plus
3R 27230213..27230799 1157..1743 100   Plus

FI06419.pep Sequence

Translation from 103 to 1278

> FI06419.pep
MEQMSGELHAASLLYMRRLMKCLGMLPFGQNLFSKGFCYVLLFVSLGFSS
YWRFSFDYEFDYDFLNDRFSSTIDLSNFVALVLGHAIIVLELLWGNCSKD
VDRQLQAIHSQIKLQLGTSNSTDRVRRYCNWIYGSLIIRWLIFIVVTIYS
NRALTINATYSELVFLARFSEFTLYCAVILFIYQELIVGGSNVLDELYRT
RYEMWSIRRLSLQKLAKLQAIHNSLWQAIRCLECYFQLSLITLLMKFFID
TSALPYWLYLSRVEHTRVAVQHYVATVECIKLLEIVVPCYLCTRCDAMQR
KFLSMFYTVTTDRRSSQLNAALRSLNLQLSQEKYKFSAGGMVDINTEMLG
KFFFGMISYIVICIQFSINFRAKKMSNEQMSQNITSTSAPI*

FI06419.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:41:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16289-PA 388 GF16289-PA 1..384 1..386 1158 57 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11555-PA 386 GG11555-PA 1..386 4..391 1796 86.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23777-PA 310 GH23777-PA 1..285 90..369 598 42.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
Gr98a-PA 391 CG13976-PA 1..391 1..391 2020 100 Plus
Gr98d-PA 412 CG31061-PA 176..405 157..387 176 25.6 Plus
Gr98b-PA 403 CG31059-PA 148..403 129..377 159 22.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24562-PA 393 GI24562-PA 1..372 1..368 712 43.2 Plus
Dmoj\GI24561-PA 399 GI24561-PA 4..378 4..373 675 40.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23924-PA 389 GL23924-PA 1..389 1..391 1107 53.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\Gr98a-PA 377 GA12669-PA 1..377 1..391 1018 50.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10394-PA 105 GM10394-PA 1..102 204..305 491 90.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21337-PA 389 GD21337-PA 1..389 1..391 1905 92.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22630-PA 305 GJ22630-PA 1..305 90..390 649 42.5 Plus
Dvir\GJ22629-PA 254 GJ22629-PA 1..238 146..378 577 47.5 Plus
Dvir\GJ22628-PA 310 GJ22628-PA 1..303 90..388 532 39.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12227-PA 397 GK12227-PA 16..362 16..356 663 42.9 Plus
Dwil\GK11756-PA 400 GK11756-PA 155..391 159..377 152 25.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23740-PA 387 GE23740-PA 1..387 4..391 1781 85.3 Plus

FI06419.hyp Sequence

Translation from 103 to 1278

> FI06419.hyp
MEQMSGELHAASLLYMRRLMKCLGMLPFGQNLFSKGFCYVLLFVSLGFSS
YWRFSFDYEFDYDFLNDRFSSTIDLSNFVALVLGHAIIVLELLWGNCSKD
VDRQLQAIHSQIKLQLGTSNSTDRVRRYCNWIYGSLIIRWLIFIVVTIYS
NRALTINATYSELVFLARFSEFTLYCAVILFIYQELIVGGSNVLDELYRT
RYEMWSIRRLSLQKLAKLQAIHNSLWQAIRCLECYFQLSLITLLMKFFID
TSALPYWLYLSRVEHTRVAVQHYVATVECIKLLEIVVPCYLCTRCDAMQR
KFLSMFYTVTTDRRSSQLNAALRSLNLQLSQEKYKFSAGGMVDINTEMLG
KFFFGMISYIVICIQFSINFRAKKMSNEQMSQNITSTSAPI*

FI06419.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
Gr98a-PA 391 CG13976-PA 1..391 1..391 2020 100 Plus
Gr98d-PA 412 CG31061-PA 176..405 157..387 176 25.6 Plus
Gr98b-PA 403 CG31059-PA 148..403 129..377 159 22.4 Plus