Clone FI06462 Report

Search the DGRC for FI06462

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:64
Well:62
Vector:pOT2
Associated Gene/TranscriptCG8481-RB
Protein status:FI06462.pep: gold
Sequenced Size:1488

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8481 2008-12-18 5.12 accounting

Clone Sequence Records

FI06462.complete Sequence

1488 bp assembled on 2008-08-28

GenBank Submission: BT044285.1

> FI06462.complete
AAGCAGCAGGGGAGCGTCTGCGAAAAAGTTTAAAAATAAACAAATTCCGT
TTTAAATCAAACTGATATTCAATTTTCCGGGCGCGCAGTAAAATCGTAGC
AGTCCACACACATACACCAAAGAGAGTCCGTTTCTGAGGCGAAATTTGTG
CTCTCACACGGAACTTGGCCCATTTCTTCGGGACGCAATATCATAATTGG
GAATCATATCAGTTCGTTCTGTTCACTTCGTCGTGGCGCACGGGAATCAG
ACGCCCAGCAGCGCAGAGCTCTCGTAATGATTGTCGCACACTTTATAGGC
GGATCCCTTCCAGATCTGAGGCACAGTCTGTTTCAGCAATATGCGATACA
TAAAGTCGGAGCCGTACTATGAAGGGCTTCCTCCATTCAATGTCAGCGGC
AGCCCGTTCAATGTGGTTCCCATTCACAACTACCCGGAGCTTATGAAAGA
CACTTGCGCCCTAATCAACGCAGAGTGGCCACGATCGGAAACGGCGCGCA
TGCGCTCCCTGGAGGCCTCCTGTGACAGCCTACCCTGCAGCCTGGTGCTG
ACCACCGAGGGAATGTGCCGCGTGATCGCTCACCTCAAGCTCAGCCCGAT
CAATTCCAAGAAGAAGGCCTGCTTCGTCGAGTCCGTGGTGGTGGACAAGC
GGCACCGTGGCCAGGGATTCGGCAAGCTGATCATGAAGTTCGCCGAGGAC
TATTGCCGCGTCGTGCTGGACCTCAAGACCATATATCTGTCCACCATCGA
CCAGGATGGATTCTACGAACGCATTGGCTACGAGTACTGCGCTCCCATTA
CAATGTATGGGCCGCGCCACTGTGAGCTGCCCAGCTTGCAAAATGCCAAA
AAGAAATACATGAAGAAGGTCTTATAGACGTCAACGCCAGTAGTAGTGGG
CTTGGCTAAATTGGGCCATACCCAGCCCGATCAGAGAGTGGCAGTGAACT
AGTCAAATTGGCAAATGCTTGAAATTCTTTACGGGTTTTACCTGCCAGCA
GCTGCTTCGAGCCATAACCTGTGGATGCCAGGCAGTCTGCCAAGTGCATG
TGTGATTGCCTCGTTGCTCTGGCAATTTGCAAAGCAGCTAAAGCTTTTGA
TTCCATTACACCGATAAGCAACCATTCATTCACCAAGCGCTTGTGTTGAT
TTTTAAATATTACTTTCCGCATGTATTTTTTAAACTTTTTGGTTCTTTTT
GTATGACAAAAGTGATCCGGGCTGTTCGGTACATCTATAAGGCTAATGTT
AACCTAATCCTAACTGTTTAGCAATTATGATTTGTTATAGTTTTGCTCAA
GTGTGTGCATAATTGCTCCTAGACAAAAATCTACCTGCAATGGTGATGAT
TATGATAATAAGAAGCTCAAGTATCTTCCAACGAAACATAGCAAATAGAC
ATATCGAGCCTTAGCATTAAGCACTCAACGAAGGGCAATAACTTCAAATA
AAACGTGTAGAAACTAAAAAAAAAAAAAAAAAAAAAAA

FI06462.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:08:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG8481-RB 1494 CG8481-RB 17..1359 1..1341 6660 99.8 Plus
CG8481.a 1268 CG8481.a 70..1133 280..1341 5265 99.8 Plus
CG8481-RA 1441 CG8481-RA 337..1306 374..1341 4795 99.7 Plus
CG8481-RA 1441 CG8481-RA 58..336 1..279 1395 100 Plus
CG8481-RB 1494 CG8481-RB 1357..1494 1328..1465 690 100 Plus
CG8481-RA 1441 CG8481-RA 1304..1441 1328..1465 690 100 Plus
CG8481.a 1268 CG8481.a 1131..1268 1328..1465 690 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5594759..5595861 374..1465 5315 99 Plus
chr3R 27901430 chr3R 5593706..5593976 9..279 1355 100 Plus
chr3R 27901430 chr3R 5594580..5594675 279..374 480 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:16:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9768923..9770030 374..1468 5275 98.8 Plus
3R 32079331 3R 9767862..9768140 1..279 1395 100 Plus
3R 32079331 3R 9768744..9768839 279..374 480 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9509754..9510723 374..1341 4795 99.7 Plus
3R 31820162 3R 9508693..9508971 1..279 1395 100 Plus
3R 31820162 3R 9510721..9510861 1328..1468 705 100 Plus
3R 31820162 3R 9509575..9509670 279..374 480 100 Plus
Blast to na_te.dros performed on 2019-03-16 17:54:48 has no hits.

FI06462.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:55:43 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5593697..5593976 1..279 99 -> Plus
chr3R 5594581..5594674 280..373 100 -> Plus
chr3R 5594759..5595861 374..1465 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:53:42 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 1..537 341..877 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:12:22 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 1..537 341..877 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:41:28 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 1..537 341..877 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:20:10 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 1..537 341..877 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:22:28 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 1..537 341..877 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:09:58 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 12..1489 1..1465 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:12:22 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 12..1489 1..1465 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:41:28 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 29..1506 1..1465 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:07:44 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 12..1489 1..1465 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:22:28 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
CG8481-RB 29..1506 1..1465 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:43 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9767862..9768140 1..279 100 -> Plus
3R 9768745..9768838 280..373 100 -> Plus
3R 9768923..9770027 374..1465 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:43 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9767862..9768140 1..279 100 -> Plus
3R 9768745..9768838 280..373 100 -> Plus
3R 9768923..9770027 374..1465 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:43 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9767862..9768140 1..279 100 -> Plus
3R 9768745..9768838 280..373 100 -> Plus
3R 9768923..9770027 374..1465 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:28 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5594467..5594560 280..373 100 -> Plus
arm_3R 5593584..5593862 1..279 100 -> Plus
arm_3R 5594645..5595749 374..1465 98   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:42:48 Download gff for FI06462.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9508693..9508971 1..279 100 -> Plus
3R 9509576..9509669 280..373 100 -> Plus
3R 9509754..9510858 374..1465 98   Plus

FI06462.pep Sequence

Translation from 340 to 876

> FI06462.pep
MRYIKSEPYYEGLPPFNVSGSPFNVVPIHNYPELMKDTCALINAEWPRSE
TARMRSLEASCDSLPCSLVLTTEGMCRVIAHLKLSPINSKKKACFVESVV
VDKRHRGQGFGKLIMKFAEDYCRVVLDLKTIYLSTIDQDGFYERIGYEYC
APITMYGPRHCELPSLQNAKKKYMKKVL*

FI06462.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23039-PA 178 GF23039-PA 1..178 1..178 923 96.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17125-PA 178 GG17125-PA 1..178 1..178 949 99.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17409-PA 178 GH17409-PA 1..178 1..178 877 91 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG8481-PB 178 CG8481-PB 1..178 1..178 954 100 Plus
CG8481-PA 168 CG8481-PA 2..168 12..178 893 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22739-PA 178 GI22739-PA 1..178 1..178 896 92.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24304-PA 168 GL24304-PA 2..168 12..178 868 95.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21106-PA 178 GA21106-PA 1..178 1..178 919 94.9 Plus
Dpse\GA21106-PB 168 GA21106-PB 2..168 12..178 868 95.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23837-PA 178 GM23837-PA 1..178 1..178 955 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18647-PA 125 GD18647-PA 1..125 54..178 664 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22741-PA 178 GJ22741-PA 1..178 1..178 896 92.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11964-PA 178 GK11964-PA 1..178 1..178 931 97.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:06:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25985-PA 178 GE25985-PA 1..178 1..178 949 99.4 Plus

FI06462.hyp Sequence

Translation from 340 to 876

> FI06462.hyp
MRYIKSEPYYEGLPPFNVSGSPFNVVPIHNYPELMKDTCALINAEWPRSE
TARMRSLEASCDSLPCSLVLTTEGMCRVIAHLKLSPINSKKKACFVESVV
VDKRHRGQGFGKLIMKFAEDYCRVVLDLKTIYLSTIDQDGFYERIGYEYC
APITMYGPRHCELPSLQNAKKKYMKKVL*

FI06462.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:24:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG8481-PB 178 CG8481-PB 1..178 1..178 954 100 Plus
CG8481-PA 168 CG8481-PA 2..168 12..178 893 100 Plus