Clone FI06474 Report

Search the DGRC for FI06474

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:64
Well:74
Vector:pOT2
Associated Gene/Transcriptbeg-RA
Protein status:FI06474.pep: gold
Sequenced Size:1211

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7842 2008-12-18 5.12 accounting

Clone Sequence Records

FI06474.complete Sequence

1211 bp assembled on 2008-10-23

GenBank Submission: BT050494.1

> FI06474.complete
ACTCCTTCAACAAAAATGTTGGCCGCCCGCAGATTACTACGATCACCGCG
GATTACCGGTGCCCTAAGCTGGTCCCGCTGGAGCAGCGATGCCGCGAAGG
CCACAACAGAAACCTCCGCCCTTTTGCAGAACGCGGAGAAGCGGCAGCAA
CTGCTCAACGAGCTTTCTGAGCCGCTGGAACAGAAAGGCCGGCCCGCCAT
CGATCCCAAGGAAACAAGTGTGATGCTCTTTCCCGGTCAGGGCACCCAGT
ACGTGGGCATGGCCAAAGACCTGCTCCGGTTCCCGGGCGCCCGTCGCATC
TTCGAGCTGGCCAACGAGGTGCTGAAATACGATCTGCTCAAGATCTGCCT
GGAGGGACCACGTGAGAAACTGAATCGCACGGAGCACGCTCAGCTGGCTG
TGATGGTATCCTCGCTGGCAGCACTGGAGCAGTTGCGTGAGGAGCGACCC
AAGGCCATTGAAACGTGTGTAGCTGCCGCAGGCTTTAGTTTGGGCGAGAT
TACCGCATTGGTGTACGCGGATGCCCTGCCTTTCGACAAGGCATTGCGAT
TGGTGCAGGTGCGGGCCACCGCCATGCAGGCGGCATGTGACCAGGCAGCC
GGAGCCATGGCGATGACTCTCTACGGACCGGATACCAATCTGGGAGAGGC
CTGCGCTCGCGCGCAGCAATGGTGTCTGGACAAAGGAGTGGAGTCGCCCT
ACTGTGGCATCGCCAACTACATGTATCCGCACTGCAAGGTAGTGGCCGGC
AACGTAGAGGCCCTGGAGTTCCTGGAACAAAATGCCAAGTCCTTCAAAAT
CCGGCGGATGAAGAGATTGGCTGTCAGTGGCGCCTTTCACACTCCTCTAA
TGCAAAGCGCCGTGGAGCCATTTACCAAAGCCCTGAAAACGGTGCGACTT
CAGGACCCCGTCATTAGAGTGTACTCCAATGTGGATGGCAAACCCTATCG
CCATGCCAAGCACATCCTAACGCAGCTGCCCAAGCAAATCGTGAGGCCCG
TCAAGTGGGAGCAGACTCTCCACGAGATGTACGAGCGCAAGCAGGGCGTC
GACTTTCCACGCACCTTCGAATGCGGTCCTGGCAAAGGCCTGGTCCAGGT
CCTGGAAAAAGTAAATGCCAAGGCCGCTCAATCCAGCTTTAATGTTATAG
CCTAATCTTGTATAAAAATTCAGTTTGCTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

FI06474.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
beg-RA 1192 beg-RA 11..1192 1..1182 5865 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17025127..17026308 1..1182 5895 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17035684..17036872 1..1189 5885 99.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:28:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17028784..17029972 1..1189 5885 99.6 Plus
Blast to na_te.dros performed on 2019-03-15 15:01:43 has no hits.

FI06474.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:02:56 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17025127..17026308 1..1182 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:53:55 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
CG7842-RA 1..1140 16..1155 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:15:56 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 1..1140 16..1155 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:58:49 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 1..1140 16..1155 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:23:14 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 1..1140 16..1155 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:55:21 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
CG7842-RA 1..1177 1..1177 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:15:56 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 11..1192 1..1182 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:58:49 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 17..1198 1..1182 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-23 18:44:16 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
CG7842-RA 1..1177 1..1177 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:23:14 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 17..1198 1..1182 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:02:56 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17035684..17036865 1..1182 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:02:56 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17035684..17036865 1..1182 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:02:56 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17035684..17036865 1..1182 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:58:49 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17028784..17029965 1..1182 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:46:50 Download gff for FI06474.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17028784..17029965 1..1182 99   Plus

FI06474.pep Sequence

Translation from 0 to 1154

> FI06474.pep
TPSTKMLAARRLLRSPRITGALSWSRWSSDAAKATTETSALLQNAEKRQQ
LLNELSEPLEQKGRPAIDPKETSVMLFPGQGTQYVGMAKDLLRFPGARRI
FELANEVLKYDLLKICLEGPREKLNRTEHAQLAVMVSSLAALEQLREERP
KAIETCVAAAGFSLGEITALVYADALPFDKALRLVQVRATAMQAACDQAA
GAMAMTLYGPDTNLGEACARAQQWCLDKGVESPYCGIANYMYPHCKVVAG
NVEALEFLEQNAKSFKIRRMKRLAVSGAFHTPLMQSAVEPFTKALKTVRL
QDPVIRVYSNVDGKPYRHAKHILTQLPKQIVRPVKWEQTLHEMYERKQGV
DFPRTFECGPGKGLVQVLEKVNAKAAQSSFNVIA*

FI06474.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:10:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10101-PA 377 GF10101-PA 4..377 11..384 1830 88.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:10:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13602-PA 378 GG13602-PA 1..378 6..384 1955 96.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:10:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15526-PA 380 GH15526-PA 7..380 10..384 1689 83.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:56
Subject Length Description Subject Range Query Range Score Percent Strand
beg-PA 379 CG7842-PA 1..379 6..384 1939 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16803-PA 380 GI16803-PA 43..380 47..384 1636 87.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16194-PA 375 GL16194-PA 4..375 13..384 1764 86.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:10:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20625-PA 375 GA20625-PA 4..375 13..384 1769 86.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:10:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25683-PA 365 GM25683-PA 1..334 6..339 1732 96.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:10:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14688-PA 379 GD14688-PA 1..379 6..384 1997 98.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12549-PA 381 GJ12549-PA 1..381 6..384 1713 83.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20461-PA 384 GK20461-PA 9..384 13..384 1669 81.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:10:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19897-PA 379 GE19897-PA 1..379 6..384 1971 96.8 Plus

FI06474.hyp Sequence

Translation from 0 to 1154

> FI06474.hyp
TPSTKMLAARRLLRSPRITGALSWSRWSSDAAKATTETSALLQNAEKRQQ
LLNELSEPLEQKGRPAIDPKETSVMLFPGQGTQYVGMAKDLLRFPGARRI
FELANEVLKYDLLKICLEGPREKLNRTEHAQLAVMVSSLAALEQLREERP
KAIETCVAAAGFSLGEITALVYADALPFDKALRLVQVRATAMQAACDQAA
GAMAMTLYGPDTNLGEACARAQQWCLDKGVESPYCGIANYMYPHCKVVAG
NVEALEFLEQNAKSFKIRRMKRLAVSGAFHTPLMQSAVEPFTKALKTVRL
QDPVIRVYSNVDGKPYRHAKHILTQLPKQIVRPVKWEQTLHEMYERKQGV
DFPRTFECGPGKGLVQVLEKVNAKAAQSSFNVIA*

FI06474.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
beg-PA 379 CG7842-PA 1..379 6..384 1939 100 Plus