Clone FI06476 Report

Search the DGRC for FI06476

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:64
Well:76
Vector:pOT2
Associated Gene/TranscriptCG4603-RA
Protein status:FI06476.pep: gold
Sequenced Size:1470

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4603 2008-12-18 5.12 accounting

Clone Sequence Records

FI06476.complete Sequence

1470 bp assembled on 2008-10-24

GenBank Submission: BT050495.1

> FI06476.complete
CAGATATCGAAATTCGATAGCATCGATACGCTGTAACAAACAAATAAAAA
AAAAGAAACAAATTAGTCAAATTACAAAATTTATCAGTTATCCAATTGCA
CACAAAAACCAACTCAAAATTAGCCCAATTTCCATCGCAGGCCCACACGA
AGAGAACAAACGGATACAATGACGGGTTCGTTCAGTGTGAAGCTCAAGTC
CAAAAAAGGTCAATTCATTGTCAACGACCTGAACGAGCATACGACGCTGG
GGGAGCTGAAAACGAAAATAGTCCAGGCCACCGACATCGAAGCGACGCAA
TTGCACGTCCTAGTAGGCTATCCGCCCAAGCCATTGGATCTCTCGCAGCA
GCAGGAGCAGCGCGCCCTCAAGGCGGTCGGAATCAACAGCGGAGAGACGT
TGATTGTGGAGGAGAAGGCTGCCCCTGCTCCTGCTGCCCCTGTGCCTGGC
GGCACCACCGTGGAGGATGACGAGGCGCTGGCGCGTCGTCTGCAGGCCGA
GGAGGAGGCACAGCTGCTGCAGGAAACCGCTGGCGGTCCAGTCGCCCAGG
CAGCAGACTACCAGCTGCCAGTGGCGCCGACGGAAAGCGGACCGAATGGC
GACTTTAATGGCATACTGCTGAAGAAGGTGGTGCCGGCGGACAATTCGTG
CCTCTTCACCAGCATACGATTCGTGCTCAACGGGAAGGTGGACAACGAGG
GCAGCGAAATGATGCGTCACATCATTGCGCAGGAGGTGGCCGCCGATCCG
CAGAGCTACAACGACGCCGTGCTGGGCAAATCGAATGCCGAGTACTGCGC
CTGGATACAGAAGGCGGATTCGTGGGGCGGCGCCATCGAAGTGTCCATAC
TGTCCAACTACTATGGCATTGAGATCGATGTGGTGGACATACAAAACGCC
ATTATCAATCGCTTTGGCGAGGACAAGAACTTTGGACTGCGTGTCTTCCT
GCTCTTCGATGGCATCCACTACGATCCGCTGTACATGGAGACATCGCCGA
GTGCTGCGCCGGCCACCATCTTCCCGGTGGAAGAGCTGGGCGTCTATCAG
CAGGCCGAGCAGTTGGCCAACGAGGCGCAGTCCTCCCGCCAATACACCAA
TGTGGATAAATTCACGCTGCGCTGCATGCAGTGCGATGTCAGGCTGGTCG
GCCAGGTGCAGGCCCAGGAGCATGCCAAGCAAACCGGACACAAGAACTTT
GGAGAGATTTAATACGTCCTGATCTTCGGCACCGTCTACATTGTGGCATT
CATGCTGTTCGCCTACTACCTGCTCACCACCTAGCCACAATCGCCGTGCG
AGGAGTCATCTCATTAGCAGTACTACCTCCACATCACCATCGCCTACCTA
AGTTATTGATTATTGAATTGAGCCCAGCCGCCTGTATTCATGTTAGTCCC
CTTTTAATCCCTTTCGGAATGCAATAAAATATACCTTCATCTACACTAGG
CAAAAAAAAAAAAAAAAAAA

FI06476.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:11:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG4603-RA 1450 CG4603-RA 3..1450 1..1451 7155 99.6 Plus
CG4603.b 1394 CG4603.b 70..1394 124..1451 6540 99.6 Plus
CG4603.a 1377 CG4603.a 70..1377 141..1451 6455 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 5126776..5128226 1..1451 7135 99.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5134223..5135672 1..1453 7155 99.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:29:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 5127323..5128772 1..1453 7165 99.6 Plus
Blast to na_te.dros performed 2019-03-16 05:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
accord2 7650 accord2 QBERT 7650bp 5737..5917 213..35 125 58.3 Minus
BS3 1790 BS3 BS3 1790bp 1636..1682 77..30 111 72.9 Minus

FI06476.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:04:29 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 5126776..5128226 1..1451 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:53:56 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RA 1..1044 169..1212 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:16:27 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RA 1..1044 169..1212 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:13:56 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RB 1..1116 169..1284 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:55:13 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RB 1..1116 169..1284 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:55:59 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RA 13..1460 1..1451 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:16:27 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RA 3..1450 1..1451 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:13:56 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RA 4..1451 1..1451 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-24 12:44:36 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RA 13..1460 1..1451 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:55:13 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
CG4603-RA 4..1451 1..1451 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:04:29 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5134223..5135670 1..1451 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:04:29 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5134223..5135670 1..1451 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:04:29 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5134223..5135670 1..1451 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:13:56 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5127323..5128770 1..1451 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:47:25 Download gff for FI06476.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5127323..5128770 1..1451 99   Plus

FI06476.pep Sequence

Translation from 168 to 1211

> FI06476.pep
MTGSFSVKLKSKKGQFIVNDLNEHTTLGELKTKIVQATDIEATQLHVLVG
YPPKPLDLSQQQEQRALKAVGINSGETLIVEEKAAPAPAAPVPGGTTVED
DEALARRLQAEEEAQLLQETAGGPVAQAADYQLPVAPTESGPNGDFNGIL
LKKVVPADNSCLFTSIRFVLNGKVDNEGSEMMRHIIAQEVAADPQSYNDA
VLGKSNAEYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFG
EDKNFGLRVFLLFDGIHYDPLYMETSPSAAPATIFPVEELGVYQQAEQLA
NEAQSSRQYTNVDKFTLRCMQCDVRLVGQVQAQEHAKQTGHKNFGEI*

FI06476.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23966-PA 354 GF23966-PA 1..354 1..347 1512 83.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15259-PA 346 GG15259-PA 1..346 1..347 1759 95.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16175-PA 362 GH16175-PA 1..362 1..347 1486 79.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG4603-PC 347 CG4603-PC 1..347 1..347 1779 100 Plus
CG4603-PB 371 CG4603-PB 1..347 1..347 1779 100 Plus
CG4603-PA 347 CG4603-PA 1..347 1..347 1779 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13328-PA 353 GI13328-PA 1..353 1..347 1458 77.7 Plus
Dmoj\GI14587-PA 166 GI14587-PA 1..166 1..160 492 61 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22615-PA 358 GL22615-PA 1..358 1..347 1481 78.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18292-PA 358 GA18292-PA 1..358 1..347 1482 78.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:08:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14693-PA 351 GM14693-PA 1..351 1..347 1801 97.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:08:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13876-PA 351 GD13876-PA 1..351 1..347 1794 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:08:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13154-PA 353 GJ13154-PA 1..353 1..347 1445 79.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:08:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20042-PA 361 GK20042-PA 1..361 1..347 1336 73.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:08:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21481-PA 352 GE21481-PA 1..352 1..347 1727 93.5 Plus

FI06476.hyp Sequence

Translation from 168 to 1211

> FI06476.hyp
MTGSFSVKLKSKKGQFIVNDLNEHTTLGELKTKIVQATDIEATQLHVLVG
YPPKPLDLSQQQEQRALKAVGINSGETLIVEEKAAPAPAAPVPGGTTVED
DEALARRLQAEEEAQLLQETAGGPVAQAADYQLPVAPTESGPNGDFNGIL
LKKVVPADNSCLFTSIRFVLNGKVDNEGSEMMRHIIAQEVAADPQSYNDA
VLGKSNAEYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFG
EDKNFGLRVFLLFDGIHYDPLYMETSPSAAPATIFPVEELGVYQQAEQLA
NEAQSSRQYTNVDKFTLRCMQCDVRLVGQVQAQEHAKQTGHKNFGEI*

FI06476.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:25:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG4603-PC 347 CG4603-PC 1..347 1..347 1779 100 Plus
CG4603-PA 347 CG4603-PA 1..347 1..347 1779 100 Plus
CG4603-PB 371 CG4603-PB 1..347 1..347 1779 100 Plus