Clone FI06483 Report

Search the DGRC for FI06483

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:64
Well:83
Vector:pOT2
Associated Gene/TranscriptCG10725-RB
Protein status:FI06483.pep: gold
Sequenced Size:873

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10725 2008-12-18 5.12 accounting

Clone Sequence Records

FI06483.complete Sequence

873 bp assembled on 2008-10-24

GenBank Submission: BT050498.1

> FI06483.complete
CAACCTTGAATATGATAAGTCGCCTGACCCTTTTGGCACTGGTTGCCCTG
CTTGGAAGCTGTAGCGCTGCTGATGGCGATGTCAATGTCTGCTCCAATGT
GGTCAACAATCTCTTTGTTCCCCAGGTGGGCAACTGTAGCAAGTACTTCC
TGTGCATGAATGAGATAGCTGTACCCCGTGAATGCCCCACGGACTACTAC
TTCGATGCGAGGGATCAGGAGTGTGTTCCCCTGATGGAGGTCGAGTGTAT
TGGATCCTGTAAGAACCGTGGTTTGTCATCGTTCTGTTACGATCGCACGT
GCACCAAGTACGTTCTCTGCTTCGACGGCACTCCGGTGATCCGTCAGTGC
TCCGATGGACTGCAGTACAACGCCCTGACCGATCGCTGTGACTATCCGCA
GTATGTCGACTGCGTGGACAATCTGTGCAGCCGGAATAATAATCCGGATG
ACATCGTTTTCATACCCAGCAAGGCTCGCTGTGACAAGTACTACATTTGC
ATGGATGGTCTTCCTCAAGTCCAGAACTGCACAAGTGGCCTGCAGTACAA
TCCAAGCACTCAGAGCTGCGATTTCCCCTCGAAAGTCAACTGCACGGTGG
AGAGCCTTCAACGGAATATCCTGCCCTTTGCCCGAGCTCCGCCACGTCTC
GCCGACATTGAGTGTCCATCGGAGGGCGCCCACTTTATTGCCCACCAGAA
GCGTCAGGATGCGTACTACTACTGCCTGAATGGACGTGGAGTCACCTTGG
ACTGCACACCCGGCCTGGTGTTCGATGCCAAGCGCGAGGAGTGCCGTGAA
CCACACCTCGTGGGCTTCTAGTTACTCGAAATAAAGATCCAATACGATTT
CAAACAAAAAAAAAAAAAAAAAA

FI06483.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:11:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10725-RB 1106 CG10725-RB 216..1073 1..858 4290 100 Plus
CG10154-RA 1193 CG10154-RA 480..619 282..421 190 75.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 13428482..13428921 160..599 2155 99.3 Plus
chr3L 24539361 chr3L 13428981..13429240 596..855 1270 99.2 Plus
chr3L 24539361 chr3L 13428277..13428423 13..159 735 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13438250..13438689 160..599 2200 100 Plus
3L 28110227 3L 13438750..13439012 596..858 1315 100 Plus
3L 28110227 3L 13438045..13438191 13..159 735 100 Plus
3L 28110227 3L 13436396..13436535 421..282 190 75.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:29:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 13431350..13431789 160..599 2200 100 Plus
3L 28103327 3L 13431850..13432112 596..858 1315 100 Plus
3L 28103327 3L 13431145..13431291 13..159 735 100 Plus
3L 28103327 3L 13429496..13429635 421..282 190 75.7 Minus
Blast to na_te.dros performed on 2019-03-16 05:03:25 has no hits.

FI06483.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:04:28 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 13428277..13428423 13..159 100 -> Plus
chr3L 13428482..13428918 160..596 99 -> Plus
chr3L 13428982..13429240 597..855 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:54:02 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 1..810 12..821 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:16:30 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 1..810 12..821 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:13:54 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 1..810 12..821 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:55:11 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 1..810 12..821 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:56:03 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 17..871 1..855 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:16:30 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 20..874 1..855 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:13:54 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 22..876 1..855 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-24 12:45:05 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 17..871 1..855 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:55:11 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
CG10725-RB 22..876 1..855 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:04:28 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13438045..13438191 13..159 100 -> Plus
3L 13438250..13438686 160..596 100 -> Plus
3L 13438751..13439009 597..855 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:04:28 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13438045..13438191 13..159 100 -> Plus
3L 13438250..13438686 160..596 100 -> Plus
3L 13438751..13439009 597..855 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:04:28 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13438045..13438191 13..159 100 -> Plus
3L 13438250..13438686 160..596 100 -> Plus
3L 13438751..13439009 597..855 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:13:54 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13431145..13431291 13..159 100 -> Plus
arm_3L 13431350..13431786 160..596 100 -> Plus
arm_3L 13431851..13432109 597..855 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:47:28 Download gff for FI06483.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13431350..13431786 160..596 100 -> Plus
3L 13431851..13432109 597..855 100   Plus
3L 13431145..13431291 13..159 100 -> Plus

FI06483.pep Sequence

Translation from 2 to 820

> FI06483.pep
TLNMISRLTLLALVALLGSCSAADGDVNVCSNVVNNLFVPQVGNCSKYFL
CMNEIAVPRECPTDYYFDARDQECVPLMEVECIGSCKNRGLSSFCYDRTC
TKYVLCFDGTPVIRQCSDGLQYNALTDRCDYPQYVDCVDNLCSRNNNPDD
IVFIPSKARCDKYYICMDGLPQVQNCTSGLQYNPSTQSCDFPSKVNCTVE
SLQRNILPFARAPPRLADIECPSEGAHFIAHQKRQDAYYYCLNGRGVTLD
CTPGLVFDAKREECREPHLVGF*

FI06483.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:08:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23484-PA 275 GF23484-PA 15..275 5..267 1021 72.6 Plus
Dana\GF10952-PA 308 GF10952-PA 46..308 27..272 680 49.4 Plus
Dana\GF10951-PA 316 GF10951-PA 72..313 25..271 618 46.2 Plus
Dana\GF24516-PA 965 GF24516-PA 763..960 86..270 207 28.4 Plus
Dana\GF24468-PA 266 GF24468-PA 6..248 4..265 199 25.4 Plus
Dana\GF24516-PA 965 GF24516-PA 757..954 24..189 181 22.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:08:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15643-PA 270 GG15643-PA 1..270 2..272 1307 90.4 Plus
Dere\GG13767-PA 301 GG13767-PA 36..300 23..271 707 51.5 Plus
Dere\GG13766-PA 296 GG13766-PA 49..296 25..272 644 45.6 Plus
Dere\GG15548-PA 1274 GG15548-PA 80..335 8..265 209 25.7 Plus
Dere\GG13542-PA 290 GG13542-PA 54..272 30..265 206 26.3 Plus
Dere\GG15548-PA 1274 GG15548-PA 208..461 27..266 167 25.5 Plus
Dere\GG15548-PA 1274 GG15548-PA 489..653 32..200 147 29.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:08:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16897-PA 268 GH16897-PA 1..266 2..270 986 66.5 Plus
Dgri\GH14674-PA 299 GH14674-PA 54..299 25..270 744 53.7 Plus
Dgri\GH14675-PA 331 GH14675-PA 66..329 26..271 653 48.9 Plus
Dgri\GH16336-PA 324 GH16336-PA 7..199 45..244 180 26.4 Plus
Dgri\GH11070-PA 313 GH11070-PA 69..187 148..271 170 32.6 Plus
Dgri\GH11070-PA 313 GH11070-PA 79..257 98..270 167 29.7 Plus
Dgri\GH16336-PA 324 GH16336-PA 5..160 98..270 151 27.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG10725-PB 269 CG10725-PB 1..269 4..272 1489 100 Plus
CG10154-PB 316 CG10154-PB 55..315 27..271 774 52.9 Plus
CG10154-PA 316 CG10154-PA 55..315 27..271 774 52.9 Plus
CG10140-PA 297 CG10140-PA 50..296 25..271 682 45.3 Plus
CG43896-PB 1324 CG43896-PB 94..334 28..264 235 26.1 Plus
CG43896-PD 2113 CG43896-PD 94..334 28..264 235 26.1 Plus
CG43896-PC 2113 CG43896-PC 94..334 28..264 235 26.1 Plus
CG7290-PB 419 CG7290-PB 5..271 7..264 233 26.3 Plus
CG7290-PA 419 CG7290-PA 5..271 7..264 233 26.3 Plus
CG33986-PB 277 CG33986-PB 40..259 29..265 227 27.5 Plus
CG6996-PC 364 CG6996-PC 28..231 29..241 226 27.7 Plus
CG6996-PB 364 CG6996-PB 28..231 29..241 226 27.7 Plus
obst-B-PA 337 CG4778-PA 97..269 98..264 216 29.6 Plus
CG17826-PA 751 CG17826-PA 573..751 44..197 202 26.8 Plus
Muc68D-PB 1514 CG6004-PB 1314..1510 86..269 201 25.1 Plus
Muc68D-PB 1514 CG6004-PB 1302..1505 18..189 196 24.4 Plus
CG7252-PA 474 CG7252-PA 175..464 30..264 194 21.6 Plus
CG43896-PB 1324 CG43896-PB 194..463 17..266 189 24.1 Plus
CG43896-PD 2113 CG43896-PD 194..463 17..266 189 24.1 Plus
CG43896-PC 2113 CG43896-PC 194..463 17..266 189 24.1 Plus
obst-B-PA 337 CG4778-PA 87..205 148..271 189 31.8 Plus
CG17826-PA 751 CG17826-PA 467..670 44..270 179 24.9 Plus
obst-E-PB 249 CG11142-PB 38..216 100..264 178 28.5 Plus
CG17826-PA 751 CG17826-PA 67..285 17..264 177 23.8 Plus
CG43896-PB 1324 CG43896-PB 543..808 29..264 176 22.3 Plus
CG43896-PD 2113 CG43896-PD 543..808 29..264 176 22.3 Plus
CG43896-PC 2113 CG43896-PC 543..808 29..264 176 22.3 Plus
CG17145-PB 334 CG17145-PB 10..271 11..270 174 23.1 Plus
CG17145-PA 334 CG17145-PA 10..271 11..270 174 23.1 Plus
CG17826-PA 751 CG17826-PA 174..391 15..264 173 23.3 Plus
CG17826-PA 751 CG17826-PA 289..497 26..264 173 23.5 Plus
Muc68D-PB 1514 CG6004-PB 1315..1438 146..270 173 28.8 Plus
CG7248-PA 796 CG7248-PA 62..263 86..262 171 24 Plus
Gasp-PB 235 CG10287-PB 32..198 96..257 168 27.6 Plus
Gasp-PA 258 CG10287-PA 32..198 96..257 168 27.6 Plus
CG43896-PD 2113 CG43896-PD 1625..1864 28..264 167 23.6 Plus
CG43896-PC 2113 CG43896-PC 1625..1864 28..264 167 23.6 Plus
CG17826-PA 751 CG17826-PA 386..603 15..264 166 23.6 Plus
obst-E-PA 242 CG11142-PA 6..222 8..198 166 25.8 Plus
obst-H-PA 269 CG33983-PA 1..239 4..264 164 23.8 Plus
Muc68E-PA 1799 CG33265-PA 1632..1799 38..198 163 28.1 Plus
CG43896-PB 1324 CG43896-PB 6..255 8..264 158 21.3 Plus
CG43896-PD 2113 CG43896-PD 6..255 8..264 158 21.3 Plus
CG43896-PC 2113 CG43896-PC 6..255 8..264 158 21.3 Plus
CG43896-PB 1324 CG43896-PB 503..650 44..201 157 27 Plus
CG43896-PD 2113 CG43896-PD 503..650 44..201 157 27 Plus
CG43896-PD 2113 CG43896-PD 1766..2032 45..266 157 23 Plus
CG43896-PC 2113 CG43896-PC 503..650 44..201 157 27 Plus
CG43896-PC 2113 CG43896-PC 1766..2032 45..266 157 23 Plus
CG5883-PA 339 CG5883-PA 79..333 18..270 157 23.7 Plus
Cht10-PA 2286 CG18140-PA 809..944 98..223 156 26.5 Plus
Cht10-PC 2286 CG18140-PC 809..944 98..223 156 26.5 Plus
Cht10-PB 2286 CG18140-PB 809..944 98..223 156 26.5 Plus
CG43896-PB 1324 CG43896-PB 290..533 30..264 154 23.5 Plus
CG43896-PD 2113 CG43896-PD 290..533 30..264 154 23.5 Plus
CG43896-PC 2113 CG43896-PC 290..533 30..264 154 23.5 Plus
obst-E-PA 242 CG11142-PA 18..212 78..264 152 25.1 Plus
obst-H-PA 269 CG33983-PA 146..263 97..215 150 30.8 Plus
obst-E-PB 249 CG11142-PB 38..248 45..220 147 24.7 Plus
obst-A-PB 237 CG17052-PB 32..222 94..270 146 27.1 Plus
obst-A-PA 237 CG17052-PA 32..222 94..270 146 27.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:08:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11514-PA 274 GI11514-PA 5..272 3..270 949 63.8 Plus
Dmoj\GI13784-PA 302 GI13784-PA 43..299 14..270 747 51 Plus
Dmoj\GI13785-PA 334 GI13785-PA 70..332 26..270 645 46.8 Plus
Dmoj\GI11528-PA 316 GI11528-PA 7..219 45..260 178 26.8 Plus
Dmoj\GI16850-PA 2671 GI16850-PA 32..210 89..264 176 26.7 Plus
Dmoj\GI11528-PA 316 GI11528-PA 5..159 98..270 170 30.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25445-PA 268 GL25445-PA 13..266 17..270 1036 73.2 Plus
Dper\GL25431-PA 299 GL25431-PA 49..298 26..271 693 53.2 Plus
Dper\GL25430-PA 292 GL25430-PA 45..290 25..270 672 48.4 Plus
Dper\GL25584-PA 267 GL25584-PA 25..247 28..265 188 25.8 Plus
Dper\GL25119-PA 336 GL25119-PA 17..275 12..270 178 26.2 Plus
Dper\GL25119-PA 336 GL25119-PA 54..326 8..264 153 24.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10525-PA 268 GA10525-PA 13..266 17..270 1036 73.2 Plus
Dpse\GA28614-PA 299 GA28614-PA 49..298 26..271 694 53.6 Plus
Dpse\GA28613-PA 292 GA28613-PA 45..290 25..270 672 48.4 Plus
Dpse\GA23638-PA 267 GA23638-PA 25..247 28..265 189 25.8 Plus
Dpse\GA14346-PA 336 GA14346-PA 17..275 12..270 179 26.2 Plus
Dpse\GA14346-PA 336 GA14346-PA 54..326 8..264 153 24.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:08:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25419-PA 271 GM25419-PA 1..271 2..272 1418 98.9 Plus
Dsec\GM24591-PA 301 GM24591-PA 40..300 27..271 712 51.9 Plus
Dsec\GM24590-PA 293 GM24590-PA 46..293 25..272 643 45.6 Plus
Dsec\GM24485-PA 274 GM24485-PA 40..256 29..265 208 27.6 Plus
Dsec\GM22259-PA 360 GM22259-PA 28..231 29..241 202 28.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:08:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14449-PA 271 GD14449-PA 1..271 2..272 1418 98.9 Plus
Dsim\GD12659-PA 301 GD12659-PA 40..300 27..271 711 51.9 Plus
Dsim\GD12658-PA 297 GD12658-PA 50..297 25..272 647 46 Plus
Dsim\GD12557-PA 279 GD12557-PA 42..261 29..265 207 28.3 Plus
Dsim\GD12212-PA 419 GD12212-PA 5..271 7..264 186 27 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:08:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11769-PA 280 GJ11769-PA 19..278 8..270 1002 69.6 Plus
Dvir\GJ13586-PA 283 GJ13586-PA 25..282 14..271 728 50.8 Plus
Dvir\GJ13587-PA 257 GJ13587-PA 5..257 38..272 657 51 Plus
Dvir\GJ11451-PA 268 GJ11451-PA 42..252 83..265 193 27 Plus
Dvir\GJ11547-PA 349 GJ11547-PA 32..260 29..260 180 25.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17084-PA 260 GK17084-PA 1..258 11..270 923 63.5 Plus
Dwil\GK17094-PA 344 GK17094-PA 84..342 27..270 721 52.9 Plus
Dwil\GK17093-PA 255 GK17093-PA 4..252 25..272 630 46.4 Plus
Dwil\GK10520-PA 286 GK10520-PA 49..266 28..265 200 27.8 Plus
Dwil\GK14769-PA 2431 GK14769-PA 866..978 98..200 175 32.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21970-PA 268 GE21970-PA 1..268 5..272 1344 94 Plus
Dyak\GE20062-PA 301 GE20062-PA 40..300 27..271 708 52.7 Plus
Dyak\GE20061-PA 301 GE20061-PA 54..301 25..272 663 47.6 Plus
Dyak\GE21870-PA 1314 GE21870-PA 79..324 7..265 201 26.3 Plus
Dyak\GE20182-PA 1247 GE20182-PA 1050..1241 30..189 201 28.5 Plus
Dyak\GE20182-PA 1247 GE20182-PA 1050..1246 86..269 192 26.6 Plus
Dyak\GE21870-PA 1314 GE21870-PA 534..745 29..265 155 23.2 Plus
Dyak\GE20182-PA 1247 GE20182-PA 1058..1174 153..270 152 28.8 Plus

FI06483.hyp Sequence

Translation from 2 to 820

> FI06483.hyp
TLNMISRLTLLALVALLGSCSAADGDVNVCSNVVNNLFVPQVGNCSKYFL
CMNEIAVPRECPTDYYFDARDQECVPLMEVECIGSCKNRGLSSFCYDRTC
TKYVLCFDGTPVIRQCSDGLQYNALTDRCDYPQYVDCVDNLCSRNNNPDD
IVFIPSKARCDKYYICMDGLPQVQNCTSGLQYNPSTQSCDFPSKVNCTVE
SLQRNILPFARAPPRLADIECPSEGAHFIAHQKRQDAYYYCLNGRGVTLD
CTPGLVFDAKREECREPHLVGF*

FI06483.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:25:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG10725-PB 269 CG10725-PB 1..269 4..272 1489 100 Plus
CG10154-PB 316 CG10154-PB 55..315 27..271 774 52.9 Plus
CG10154-PA 316 CG10154-PA 55..315 27..271 774 52.9 Plus
CG10140-PA 297 CG10140-PA 50..296 25..271 682 45.3 Plus
CG7290-PB 419 CG7290-PB 5..271 7..264 233 26.3 Plus