BDGP Sequence Production Resources |
Search the DGRC for FI06493
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 64 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | holn1-RA |
Protein status: | FI06493.pep: gold |
Sequenced Size: | 1212 |
1212 bp assembled on 2009-06-09
GenBank Submission: BT088782.1
> FI06493.complete CTTAAAAATATTGACATTGCATTTAGTTTTGTCTTGAGTTCTTGATAAAA TGGCGAGCAAAAGAAAGCACCAAGCATCCCAGAAAGTGAAAGAGGAATCC TTCAAGAAACACACGCTTGACTCCGATGAAGAGGATTCTGACGACTACGA AAGGGAATACCTCAATGATAGCGACATTGAGGGCGGCGAGGAGGGCGTGG CAAAAGTGGAAGACGATGTGAAGGTAACACCCTTCAATATGAAGGAAGAA CTGGAGGAGGGACACTTCGACAAAGATGGTCACTACCATTGGAACAAGGA GACGGAAGCAAAGGACAATTGGTTGGACAACATAGACTGGGTTAAAATTG GCACACAGAAGAACGCCTTCGACCCGGCAAAAGATGAAGAAAACTCTTCC GATGAGGAGAAGAACGAACCCGTGGGCAAGGCCTTTAACTTGTCCATGAA CCTCATGAAAATGGTCGAGTTTATGAAACCGGGAGAGACTGTCAAGATGA CCCTGCAGCGTCTGGGTAAGCAGCGCCCCGTCCTAACAACCCTTCAGAGG ATTAAGCAGAAAAAGGCCGGCATCGTTGACCCAAAGACACAGGAAATCTC TCAGCTCACCGAGCTGGCCAACGAGATTCTCTCGAAGACGGGCAATATGG ATATATATCAGGATACGTACGAAAGCATCAAGGCCAAGATCGCCGATTTG CCAGGAACGAGCAAACCTAAAGTAGCCGATGATATTGATATGTATGCAGA TGATTTCGAAACGAAAGAATTGGAGCGCTCTAAGACATCGTCGAGTGATA GCTCCAAACCAACGACGACTACCTCAGAGGTGACCTGGGAGTTTAAATGG TCGCAGGATGAGACTGATATCCAGGGACCCTTTTCCACGGAGAAAATGTT GAAATGGTCCCAGGAGAACTACTTTAAAAACGGAGTCTATGTGCGAAAGT GCGGCGAAAACACAAATTTCTATACAAGCAACCGCATAGATTTCGATTTG TACTTGTAGGCCTTAGTTAACAAATGTTAAATTCTTTGGGTTTTAACATG TTTTCTGCAAATACTTTGTTCTATAATTGTATACTGTATACTTTACAAGA GGTTTCAATTAGTTTGCACTTGGTTTGGACTTAAAATAAAATTCATATTC ATATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10435342..10436151 | 347..1156 | 4050 | 100 | Plus |
chr2L | 23010047 | chr2L | 10435082..10435276 | 152..346 | 975 | 100 | Plus |
chr2L | 23010047 | chr2L | 10434872..10435029 | 1..158 | 760 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10436507..10437317 | 347..1157 | 4055 | 100 | Plus |
2L | 23513712 | 2L | 10436247..10436441 | 152..346 | 975 | 100 | Plus |
2L | 23513712 | 2L | 10436037..10436194 | 1..158 | 775 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10436507..10437317 | 347..1157 | 4055 | 100 | Plus |
2L | 23513712 | 2L | 10436247..10436441 | 152..346 | 975 | 100 | Plus |
2L | 23513712 | 2L | 10436037..10436194 | 1..158 | 775 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 6024..6133 | 1156..1050 | 120 | 58.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10434872..10435024 | 1..153 | 99 | -> | Plus |
chr2L | 10435084..10435276 | 154..346 | 100 | -> | Plus |
chr2L | 10435342..10436151 | 347..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5198-RA | 1..960 | 50..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5198-RA | 1..960 | 50..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
holn1-RA | 1..960 | 50..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
holn1-RA | 1..960 | 50..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5198-RA | 47..1202 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5198-RA | 47..1202 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
holn1-RA | 43..1198 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
holn1-RA | 43..1198 | 1..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10436037..10436189 | 1..153 | 100 | -> | Plus |
2L | 10436249..10436441 | 154..346 | 100 | -> | Plus |
2L | 10436507..10437316 | 347..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10436037..10436189 | 1..153 | 100 | -> | Plus |
2L | 10436249..10436441 | 154..346 | 100 | -> | Plus |
2L | 10436507..10437316 | 347..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10436037..10436189 | 1..153 | 100 | -> | Plus |
2L | 10436249..10436441 | 154..346 | 100 | -> | Plus |
2L | 10436507..10437316 | 347..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10436037..10436189 | 1..153 | 100 | -> | Plus |
arm_2L | 10436249..10436441 | 154..346 | 100 | -> | Plus |
arm_2L | 10436507..10437316 | 347..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10436507..10437316 | 347..1156 | 100 | Plus | |
2L | 10436037..10436189 | 1..153 | 100 | -> | Plus |
2L | 10436249..10436441 | 154..346 | 100 | -> | Plus |
Translation from 49 to 1008
> FI06493.pep MASKRKHQASQKVKEESFKKHTLDSDEEDSDDYEREYLNDSDIEGGEEGV AKVEDDVKVTPFNMKEELEEGHFDKDGHYHWNKETEAKDNWLDNIDWVKI GTQKNAFDPAKDEENSSDEEKNEPVGKAFNLSMNLMKMVEFMKPGETVKM TLQRLGKQRPVLTTLQRIKQKKAGIVDPKTQEISQLTELANEILSKTGNM DIYQDTYESIKAKIADLPGTSKPKVADDIDMYADDFETKELERSKTSSSD SSKPTTTTSEVTWEFKWSQDETDIQGPFSTEKMLKWSQENYFKNGVYVRK CGENTNFYTSNRIDFDLYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15791-PA | 320 | GF15791-PA | 1..320 | 1..319 | 1341 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10134-PA | 320 | GG10134-PA | 1..320 | 1..319 | 1526 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13298-PA | 311 | GH13298-PA | 1..311 | 1..319 | 1049 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
holn1-PA | 319 | CG5198-PA | 1..319 | 1..319 | 1682 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18162-PA | 312 | GI18162-PA | 1..312 | 1..319 | 1059 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19140-PA | 316 | GL19140-PA | 1..316 | 1..319 | 1091 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18730-PA | 314 | GA18730-PA | 1..314 | 1..319 | 1096 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18415-PA | 318 | GM18415-PA | 1..318 | 1..319 | 1628 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23703-PA | 318 | GD23703-PA | 1..318 | 1..319 | 1628 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14592-PA | 312 | GJ14592-PA | 1..312 | 1..319 | 1047 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15260-PA | 326 | GK15260-PA | 1..326 | 1..319 | 1053 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18946-PA | 320 | GE18946-PA | 1..320 | 1..319 | 1538 | 93.8 | Plus |
Translation from 49 to 1008
> FI06493.hyp MASKRKHQASQKVKEESFKKHTLDSDEEDSDDYEREYLNDSDIEGGEEGV AKVEDDVKVTPFNMKEELEEGHFDKDGHYHWNKETEAKDNWLDNIDWVKI GTQKNAFDPAKDEENSSDEEKNEPVGKAFNLSMNLMKMVEFMKPGETVKM TLQRLGKQRPVLTTLQRIKQKKAGIVDPKTQEISQLTELANEILSKTGNM DIYQDTYESIKAKIADLPGTSKPKVADDIDMYADDFETKELERSKTSSSD SSKPTTTTSEVTWEFKWSQDETDIQGPFSTEKMLKWSQENYFKNGVYVRK CGENTNFYTSNRIDFDLYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
holn1-PA | 319 | CG5198-PA | 1..319 | 1..319 | 1682 | 100 | Plus |