Clone FI06496 Report

Search the DGRC for FI06496

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:64
Well:96
Vector:pOT2
Associated Gene/TranscriptGlcAT-I-RA
Protein status:FI06496.pep: gold
Sequenced Size:1543

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
GlcAT-I 2008-08-15 Release 5.9 accounting
GlcAT-I 2008-12-18 5.12 accounting

Clone Sequence Records

FI06496.complete Sequence

1543 bp assembled on 2008-08-14

GenBank Submission: BT044296.1

> FI06496.complete
TTTGTTTTAACAAAATTCGGTTTTTACCAACTGCCGCAGGATGTCGGAGG
TCCGCATTCGCCCGCGCCAGGTCCTCATCCTGATCATTGTCTTCCTCGTG
GTGCTGATGATGGTGCACCGAAACGGGAAGCGCACATGCCAGGGTCCAGA
ATACCTCCAGGCCATGTTCGTCCAAGGCGACACGTTACCCACGATTTACG
CCGTAACGCCAACGTATCCACGGCCCGCCCAGAAAGCCGAGCTAACCAGA
CTATCTCACCTCTTTATGCTGCTGCCGCACCTGCACTGGATCATTGTGGA
GGACACGAACGCCACCACTCCGCTGGTCAGAAACCTTTTGGATAGAGCCG
GATTGGAGAAGCGTTCCACGTTGCTGAACATCAAGACGCCATCTGAGTTC
AAGCTGAAGGGCAAGGACCCCAACTGGATTAAGCCACGCGGCGTGGAGCA
AAGAAATCTGGCTTTGGCCTGGTTGAGGAACCATGTCGACGTCGATCGGC
ACTCTATAGTGTTCTTCATGGACGACGACAACTCCTACTCCACGGAACTG
TTCGCCGAGATGAGCAAAATCGAAAGGGGTCGCGTGGGCGTCTGGCCGGT
GGGTTTGGTCGGCGGTCTGATGGTGGAGCGACCCCTGCTTACGGAGGATG
GCACTAAGGTGACCGGATTCAATGCCGCTTGGCGACCGGAAAGACCATTC
CCCATCGACATGGCCGCCTTCGCCATCAGCATGGATCTCTTCATCAGGAA
TCCGCAGGCCACGTTCTCGTACGAGGTGCAAAGAGGCTATCAGGAGAGCG
AGATCCTGAGGCATCTGACCACCAGGGATCAGCTGCAGCCACTGGCCAAT
AGGTGCACGGATGTGCTCGTCTGGCACACGCGCACTGAGAAGACCAAGCT
AGCCGCCGAGGAGGCGCTCCTGAAGAAGGGCCAGCGATCCGATGGCGGCA
TGGAGGTCTAACCCGGGACCTAATTGTATATATAGCAAACTATCATCCTA
GTGAATTTACTTAATGTGTTCCGTCTCCTCATAGTTTAGCCCCAATTTAT
TTAATACTTTTTACTTCATATTTTCTATATATTTTATAAAAACATGGTGT
AGGCAAACATTTTGATGATTTAAGTTCAGACTAAGTCACTCTTTTTTTTT
TTAACCAGACATTTTCGGATTGAAATCAAATGAGATTTTTTCTAACTACA
CCGCGTACTTGCGCAAATTTTAAATATGAAAACACTACTAGTTGTATAAT
GCTCAAAGAAAAGTTGTATAATATCTTCGTAAGATAGTACCTAGTCTATC
TGCACGAAGGTTATTTATTTTACCTCGAAAGGTAAACCCAAATGAACTAA
TTCTCTGTCTTTGTTGTACCTAAGCTATAAGAACGCTTTAAGTTGCCCCA
TTGTATTATATATAGGCCTATAGGTTTTGCAAATTGTTGGAGATTAGTTA
CATTAGATATACATAAGCTTCCCCTGTGTGCCTCCCAATTGACGCAAATA
AAATTGGTAGTGTTATCGAAACCTAAAAAAAAAAAAAAAAAAA

FI06496.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:05:02
Subject Length Description Subject Range Query Range Score Percent Strand
GlcAT-I.a 2216 GlcAT-I.a 103..1641 1..1538 7610 99.7 Plus
GlcAT-I-RA 1668 GlcAT-I-RA 103..1641 1..1538 7610 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:39:48
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 4024778..4026056 247..1524 6345 99.9 Plus
chrX 22417052 chrX 4024469..4024717 1..249 1245 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:39:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4131555..4132847 247..1538 6370 99.7 Plus
X 23542271 X 4131246..4131494 1..249 1245 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 4139653..4140945 247..1538 6380 99.6 Plus
X 23527363 X 4139344..4139592 1..249 1245 100 Plus
Blast to na_te.dros performed on 2019-03-16 05:39:46 has no hits.

FI06496.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:40:49 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 4024469..4024717 1..249 100 -> Plus
chrX 4024781..4026056 250..1524 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:54:09 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 1..921 41..961 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:07:13 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 1..921 41..961 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:21:33 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 1..921 41..961 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:27 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 1..921 41..961 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:08:58 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 1..921 41..961 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:32:20 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 1..1525 1..1524 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:07:13 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 30..1554 1..1524 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:21:33 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 36..1560 1..1524 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:29:09 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 1..1525 1..1524 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:08:58 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
GlcAT-I-RA 36..1560 1..1524 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:40:49 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
X 4131246..4131494 1..249 100 -> Plus
X 4131558..4132833 250..1524 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:40:49 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
X 4131246..4131494 1..249 100 -> Plus
X 4131558..4132833 250..1524 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:40:49 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
X 4131246..4131494 1..249 100 -> Plus
X 4131558..4132833 250..1524 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:21:33 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4025279..4025527 1..249 100 -> Plus
arm_X 4025591..4026866 250..1524 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:36:27 Download gff for FI06496.complete
Subject Subject Range Query Range Percent Splice Strand
X 4139344..4139592 1..249 100 -> Plus
X 4139656..4140931 250..1524 99   Plus

FI06496.pep Sequence

Translation from 40 to 960

> FI06496.pep
MSEVRIRPRQVLILIIVFLVVLMMVHRNGKRTCQGPEYLQAMFVQGDTLP
TIYAVTPTYPRPAQKAELTRLSHLFMLLPHLHWIIVEDTNATTPLVRNLL
DRAGLEKRSTLLNIKTPSEFKLKGKDPNWIKPRGVEQRNLALAWLRNHVD
VDRHSIVFFMDDDNSYSTELFAEMSKIERGRVGVWPVGLVGGLMVERPLL
TEDGTKVTGFNAAWRPERPFPIDMAAFAISMDLFIRNPQATFSYEVQRGY
QESEILRHLTTRDQLQPLANRCTDVLVWHTRTEKTKLAAEEALLKKGQRS
DGGMEV*

FI06496.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:48:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20780-PA 308 GF20780-PA 1..308 1..306 1471 88.3 Plus
Dana\GF24562-PA 495 GF24562-PA 240..472 43..288 421 38.3 Plus
Dana\GF22782-PA 469 GF22782-PA 188..415 47..288 409 36.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18695-PA 306 GG18695-PA 1..306 1..306 1600 97.4 Plus
Dere\GG13931-PA 481 GG13931-PA 226..454 43..284 416 37.7 Plus
Dere\GG10044-PA 421 GG10044-PA 142..367 49..288 404 36.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24148-PA 307 GH24148-PA 1..307 1..306 1315 78.9 Plus
Dgri\GH16660-PA 472 GH16660-PA 213..459 39..298 405 35.5 Plus
Dgri\GH10677-PA 435 GH10677-PA 156..379 49..286 397 37.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:36
Subject Length Description Subject Range Query Range Score Percent Strand
GlcAT-I-PA 306 CG32775-PA 1..306 1..306 1595 100 Plus
GlcAT-P-PD 479 CG6207-PD 224..452 43..284 407 37.7 Plus
GlcAT-P-PA 479 CG6207-PA 224..452 43..284 407 37.7 Plus
GlcAT-P-PE 316 CG6207-PE 68..289 50..284 402 38 Plus
GlcAT-P-PB 316 CG6207-PB 68..289 50..284 402 38 Plus
GlcAT-P-PC 316 CG6207-PC 68..289 50..284 402 38 Plus
GlcAT-S-PA 327 CG3881-PA 42..272 40..287 398 36.9 Plus
GlcAT-S-PB 409 CG3881-PB 124..354 40..287 398 36.9 Plus
GlcAT-S-PC 486 CG3881-PC 201..431 40..287 398 36.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:48:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16402-PA 307 GI16402-PA 1..307 1..306 1350 81.5 Plus
Dmoj\GI11619-PA 462 GI11619-PA 203..439 39..288 402 36.5 Plus
Dmoj\GI11095-PA 440 GI11095-PA 161..386 49..288 391 37.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14437-PA 113 GL14437-PA 1..113 194..306 516 82.3 Plus
Dper\GL22838-PA 471 GL22838-PA 212..448 39..288 423 36.9 Plus
Dper\GL14436-PA 91 GL14436-PA 1..85 1..83 366 80 Plus
Dper\GL18922-PA 156 GL18922-PA 1..102 184..288 166 32.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19440-PA 475 GA19440-PA 216..452 39..288 423 36.9 Plus
Dpse\GA17748-PA 439 GA17748-PA 155..385 44..288 382 36.6 Plus
Dpse\GlcAT-I-PA 76 GA17129-PA 1..76 231..306 345 82.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12329-PA 133 GM12329-PA 1..133 174..306 708 100 Plus
Dsec\GM12328-PA 130 GM12328-PA 1..127 1..127 639 96.9 Plus
Dsec\GM24766-PA 477 GM24766-PA 222..454 43..288 418 37.5 Plus
Dsec\GM12490-PA 84 GM12490-PA 1..79 174..252 413 97.5 Plus
Dsec\GM17591-PA 417 GM17591-PA 138..363 49..288 396 36.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16673-PA 306 GD16673-PA 1..306 1..306 1623 99.3 Plus
Dsim\GD16798-PA 162 GD16798-PA 1..114 1..163 525 66.9 Plus
Dsim\GD12815-PA 477 GD12815-PA 222..454 43..288 418 37.5 Plus
Dsim\GD23619-PA 314 GD23619-PA 35..260 49..288 403 36.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17023-PA 307 GJ17023-PA 1..307 1..306 1343 81.5 Plus
Dvir\GJ11297-PA 430 GJ11297-PA 180..407 48..288 402 36.6 Plus
Dvir\GJ18316-PA 438 GJ18316-PA 159..384 49..288 372 37.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15595-PA 308 GK15595-PA 1..308 1..306 1386 82.8 Plus
Dwil\GK20549-PA 487 GK20549-PA 239..474 50..298 415 37.1 Plus
Dwil\GK23869-PA 428 GK23869-PA 149..372 49..286 403 36.8 Plus
Dwil\GK20550-PA 289 GK20550-PA 8..265 9..288 385 35.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GlcAT-I-PA 306 GE16334-PA 1..306 1..306 1601 98 Plus
Dyak\GlcAT-P-PA 486 GE20229-PA 231..459 43..284 423 38.1 Plus
Dyak\GlcAT-S-PA 421 GE18858-PA 142..367 49..288 405 37.3 Plus

FI06496.hyp Sequence

Translation from 40 to 960

> FI06496.hyp
MSEVRIRPRQVLILIIVFLVVLMMVHRNGKRTCQGPEYLQAMFVQGDTLP
TIYAVTPTYPRPAQKAELTRLSHLFMLLPHLHWIIVEDTNATTPLVRNLL
DRAGLEKRSTLLNIKTPSEFKLKGKDPNWIKPRGVEQRNLALAWLRNHVD
VDRHSIVFFMDDDNSYSTELFAEMSKIERGRVGVWPVGLVGGLMVERPLL
TEDGTKVTGFNAAWRPERPFPIDMAAFAISMDLFIRNPQATFSYEVQRGY
QESEILRHLTTRDQLQPLANRCTDVLVWHTRTEKTKLAAEEALLKKGQRS
DGGMEV*

FI06496.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
GlcAT-I-PA 306 CG32775-PA 1..306 1..306 1595 100 Plus
GlcAT-P-PD 479 CG6207-PD 224..452 43..284 407 37.7 Plus
GlcAT-P-PE 316 CG6207-PE 68..289 50..284 402 38 Plus
GlcAT-P-PB 316 CG6207-PB 68..289 50..284 402 38 Plus
GlcAT-P-PC 316 CG6207-PC 68..289 50..284 402 38 Plus