Clone FI06517 Report

Search the DGRC for FI06517

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:65
Well:17
Vector:pOT2
Associated Gene/TranscriptEfhc1.1-RA
Protein status:FI06517.pep: gold
Sequenced Size:2577

Clone Sequence Records

FI06517.complete Sequence

2577 bp assembled on 2009-04-06

GenBank Submission: BT081972.1

> FI06517.complete
CGTACACCAAATATACAAAATATTTCCAAAGAGAAAAGGTCGAAAACGGG
TCAATAATTCACATAAAATATATACAATGCTGCGCATTCCTGGAATGCCC
CTTCTTCCGGGGACTCTCTTTCGCGATGTATCCAAGGGACATTACCCCAA
ACCGCAATCGCTGGCCAATGTCCAAGGTCTGAGCATGCTGAGTGATCGCC
AGCAACCGGCTCCTGTGGAATCGGGCAGCGTTACGGTGGACATAAGCTGT
CCCCCAGTTGGGGCGTCCTCCATATATCCGCCACGTTCGGGTCCCCGTAT
GCCTCCATGGCTGGCGTATGACAAGAAGGTGCTGTGCTTCCATGCCTACT
TCAAGCAAACCCTTCAGGAGGTCTACCATGCGCCCTATCTGGTGCGCAAG
GTTAAGATCTACTACTATCTGGAAGATGGTACTTTAGAGATCTACGAGCC
CCGGGTGGACAACTCGGGAATTGTGCAGGGATGTGTAGTTCATAGGCAGC
GGGTCCAGAAGGCGCCGCCGTGCGATAATGAGTTCATGTCCCTCATCGAT
CTGAACGTGGATCAGACTGTTCAGATATTTGATCGTCAGTATCATATCAC
CGATTGCGATCCGTTCACAAGAACTTTCTTAAACAAACGCGGCATAACCG
TTCCCGATCCGGTCAAATCGCCATGCGATCCCACCGAGGAGCAACGAAAG
CGTGAAAACCAACCGCGATCTGGTAATTTAATCCCAAAGAATCATCCGTT
TGCCCAGTTCCTCAAGTACGATAGGCAAATACTCAAGTTCCAGGCGTACT
GGGACGATAGAACCGAGTTCGGAGACGTACGCAAGCTGGAGCTGTGCTAC
TATCTCTCCGACGATACCATCGAAATCAAGGAGCAGCACATTCGCAACTC
AGGTCGCGACGGCCCAACCGTTTTTCTTAAACGCGGGCGCTTAGCTCGAG
AGTTCGAAGGACTCCAGCTGCCAGGACAGATGACCCCGATGACGCTACTG
AACGTCCTGGGCACCAACATGCGCAACGTGCGCTACTGCGTGGATCCGCT
GAACACTGGAAACAAGGAGATTCATTACTATAGGGAAAAGGATCTCCAGA
TAGGCAGTGTGATAAACGTGTATGGCCGTGCGGTGGTGATAACCGAACTG
GATCCCTTCACCCAGAACTATTACCGCCAGCGATATGGCATACAGGATTT
TACCCCACTGCCGATCCCCGCCAGATCCGATGATTGTGCTGACCATAGAT
CGGAACGACAATTGCCACCGTACAATGGATGGGGTAGCTACGAGGATTCG
GTGGGCAATTGCATATCGGTCGAACCGAAGCCGCCAAAGTCCGATTTCAA
AAAGTTCATCAAATACGATCGTTATGTGCTCCGCTTTGGCGCCAAAATGC
TCTCGACCATCAAGGCGAATTGCGAGCGAATCTTTGTGATTAGCTACTAT
CTATGCGATGATACGCTGCAAATCCAGGAGATCGCCGTGCGGAACTCCGG
ATTCCTCGGTGGTGAGTTCATGAAGCGCACACGCTTGGAGTTGCCTGGCC
AGGAGAGGTTCTCATGCAAGCAGCCGCAGTACTATATGCCATGGAACTTC
TTTGTCGGATCGACTATGTCGCTGAAGGACTTCATTTTTCACATAGTCTC
GGCGGACGAGTACACGCTTATGTACATGGAGCACCATCCGGAGATCTTTC
CCCATGCGAATGTGGGTGTGATCATGGAGAAGGTGAAGAGTGCCCTGCAG
AATCGCATGGCGGAGTTTGTGGGATCGTGTGTTCCGGACTGTACGGATCT
TGAGAAGAAGCGTGATGTCTTTGTGTCCTTCGAGAGTTTCAAGGGCGCCC
TGATCAGCATTATGGGTAACCAGATCAGCGATCACGAGATCATCAGCCTC
TGCCGGCACTTTTCGGCGGAGAAGAGTCAACCAAATGCCTGCGATCGGTC
CACGGTGCGGGCGGCGGCTCATCTCGAGCTTAAGAGAACCCTGTGGAATG
CTCGGGATGATCTGATGGAGCACTTCCATCACATCAATCCGACCAACCAG
CCATTCCTGCCCGAAGTTAAGGTGAGATCGGCACTGCGGGGATGTCGCCT
GCCATTCTCCTTGGAACTGATCGACAATATACTCTCGATTCTGAATCGCA
ACGAGTGCGACGACATCGAGGTGTGCGACCTAATGAACTTCATCGACGTA
TCATGCGGCAAGGGCTGCGACATGCTGCCCGTGAACCACGCCTTCGAGCT
CTGCCCCAAGATCCCGTTCCTGAACAAGGGTCGTGTGGTGAACTTCACTT
GCTTCCTGAGGGAACTTAATCTGCCCCTCAACTTGCCAGCCGGCGGCGAG
AAGAACAACGATGCGATTGCAGAGGGTGGAAGGATAATGCCACCATCGGC
CATGCCCGATACCGATGCCCACAAGGCGAATGAGGACGACGCACAGCACA
TGGCTTGATTGAGACACGTATCTTGCAGTGCACACACATATTTCGTTCCA
AATTATTTGTTGTAATTCCTTCCATTATCTTGAATCGTCAAAAAAAAATA
TATATTTTTGAAAAAAAAAAAAAAAAA

FI06517.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG8959-RA 2661 CG8959-RA 88..2645 1..2558 12790 100 Plus
CG11048-RA 2572 CG11048-RA 392..521 300..429 260 80 Plus
CG11048-RA 2572 CG11048-RA 847..987 743..883 165 74.4 Plus
CG11048-RA 2572 CG11048-RA 2347..2414 2240..2307 160 82.3 Plus
CG11048-RA 2572 CG11048-RA 1746..1802 1633..1689 150 84.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15670248..15671856 2558..950 8030 99.9 Minus
chrX 22417052 chrX 15672838..15673385 675..128 2725 99.8 Minus
chrX 22417052 chrX 15672507..15672782 950..675 1335 98.9 Minus
chrX 22417052 chrX 15673441..15673570 130..1 650 100 Minus
chr2R 21145070 chr2R 16127448..16127747 300..599 285 73 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15780399..15782007 2558..950 8045 100 Minus
X 23542271 X 15782978..15783525 675..128 2740 100 Minus
X 23542271 X 15782647..15782922 950..675 1380 100 Minus
X 23542271 X 15783581..15783710 130..1 650 100 Minus
2R 25286936 2R 20240390..20240689 300..599 300 73.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:45:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15788497..15790105 2558..950 8045 100 Minus
X 23527363 X 15791076..15791623 675..128 2740 100 Minus
X 23527363 X 15790745..15791020 950..675 1380 100 Minus
X 23527363 X 15791679..15791808 130..1 650 100 Minus
2R 25260384 2R 20241589..20241718 300..429 260 80 Plus
2R 25260384 2R 20242165..20242305 743..883 165 74.4 Plus
2R 25260384 2R 20243856..20243923 2240..2307 160 82.3 Plus
2R 25260384 2R 20243131..20243187 1633..1689 150 84.2 Plus
Blast to na_te.dros performed on 2019-03-16 15:03:07 has no hits.

FI06517.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:03:44 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15670247..15671856 950..2560 99 <- Minus
chrX 15672508..15672781 676..949 98 <- Minus
chrX 15672838..15673385 128..675 99 <- Minus
chrX 15673444..15673570 1..127 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:08:47 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
CG8959-RA 1..2382 77..2458 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:43:55 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
CG8959-RA 1..2382 77..2458 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:40:38 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
Efhc1.1-RA 1..2382 77..2458 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:40:30 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
Efhc1.1-RA 1..2382 77..2458 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-06 17:54:15 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
CG8959-RA 1..2382 77..2458 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:43:55 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
CG8959-RA 1..2559 1..2560 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:40:38 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
Efhc1.1-RA 1..2559 1..2560 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:40:30 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
Efhc1.1-RA 1..2559 1..2560 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:44 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
X 15780398..15782007 950..2560 99 <- Minus
X 15782648..15782921 676..949 100 <- Minus
X 15782978..15783525 128..675 100 <- Minus
X 15783584..15783710 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:44 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
X 15780398..15782007 950..2560 99 <- Minus
X 15782648..15782921 676..949 100 <- Minus
X 15782978..15783525 128..675 100 <- Minus
X 15783584..15783710 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:44 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
X 15780398..15782007 950..2560 99 <- Minus
X 15782648..15782921 676..949 100 <- Minus
X 15782978..15783525 128..675 100 <- Minus
X 15783584..15783710 1..127 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:40:38 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15677617..15677743 1..127 100   Minus
arm_X 15674431..15676040 950..2560 99 <- Minus
arm_X 15676681..15676954 676..949 100 <- Minus
arm_X 15677011..15677558 128..675 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:18:59 Download gff for FI06517.complete
Subject Subject Range Query Range Percent Splice Strand
X 15788496..15790105 950..2560 99 <- Minus
X 15790746..15791019 676..949 100 <- Minus
X 15791076..15791623 128..675 100 <- Minus
X 15791682..15791808 1..127 100   Minus

FI06517.pep Sequence

Translation from 1 to 2457

> FI06517.pep
VHQIYKIFPKRKGRKRVNNSHKIYTMLRIPGMPLLPGTLFRDVSKGHYPK
PQSLANVQGLSMLSDRQQPAPVESGSVTVDISCPPVGASSIYPPRSGPRM
PPWLAYDKKVLCFHAYFKQTLQEVYHAPYLVRKVKIYYYLEDGTLEIYEP
RVDNSGIVQGCVVHRQRVQKAPPCDNEFMSLIDLNVDQTVQIFDRQYHIT
DCDPFTRTFLNKRGITVPDPVKSPCDPTEEQRKRENQPRSGNLIPKNHPF
AQFLKYDRQILKFQAYWDDRTEFGDVRKLELCYYLSDDTIEIKEQHIRNS
GRDGPTVFLKRGRLAREFEGLQLPGQMTPMTLLNVLGTNMRNVRYCVDPL
NTGNKEIHYYREKDLQIGSVINVYGRAVVITELDPFTQNYYRQRYGIQDF
TPLPIPARSDDCADHRSERQLPPYNGWGSYEDSVGNCISVEPKPPKSDFK
KFIKYDRYVLRFGAKMLSTIKANCERIFVISYYLCDDTLQIQEIAVRNSG
FLGGEFMKRTRLELPGQERFSCKQPQYYMPWNFFVGSTMSLKDFIFHIVS
ADEYTLMYMEHHPEIFPHANVGVIMEKVKSALQNRMAEFVGSCVPDCTDL
EKKRDVFVSFESFKGALISIMGNQISDHEIISLCRHFSAEKSQPNACDRS
TVRAAAHLELKRTLWNARDDLMEHFHHINPTNQPFLPEVKVRSALRGCRL
PFSLELIDNILSILNRNECDDIEVCDLMNFIDVSCGKGCDMLPVNHAFEL
CPKIPFLNKGRVVNFTCFLRELNLPLNLPAGGEKNNDAIAEGGRIMPPSA
MPDTDAHKANEDDAQHMA*

FI06517.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15903-PA 795 GF15903-PA 1..790 26..813 3547 81.6 Plus
Dana\GF11750-PA 765 GF11750-PA 1..756 26..774 2378 57.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19373-PA 791 GG19373-PA 1..791 26..818 4079 95.3 Plus
Dere\GG22018-PA 765 GG22018-PA 1..756 26..774 2364 57.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:17:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22339-PA 780 GH22339-PA 1..779 26..803 3052 71 Plus
Dgri\GH23034-PA 763 GH23034-PA 1..754 26..774 2387 57.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
Efhc1.1-PA 793 CG8959-PA 1..793 26..818 4269 100 Plus
Efhc1.2-PA 765 CG11048-PA 1..756 26..774 2385 58.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21716-PA 780 GI21716-PA 1..776 26..800 3115 71.8 Plus
Dmoj\GI21104-PA 763 GI21104-PA 1..754 26..774 2398 57.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13173-PA 796 GL13173-PA 1..790 26..816 3523 81.3 Plus
Dper\GL18445-PA 559 GL18445-PA 2..553 265..816 2468 80.5 Plus
Dper\GL10167-PA 764 GL10167-PA 1..755 26..774 2372 57.1 Plus
Dper\GL15286-PA 120 GL15286-PA 1..116 32..147 553 87.1 Plus
Dper\GL18445-PA 559 GL18445-PA 13..255 131..326 183 28.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21435-PA 796 GA21435-PA 1..790 26..816 3521 81.2 Plus
Dpse\GA10726-PA 764 GA10726-PA 1..755 26..774 2383 57.1 Plus
Dpse\GA22209-PA 283 GA22209-PA 1..277 539..816 1106 72.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22527-PA 793 GM22527-PA 1..793 26..818 4229 98.4 Plus
Dsec\GM21999-PA 765 GM21999-PA 1..756 26..774 2411 58.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15778-PA 793 GD15778-PA 1..793 26..818 4241 98.5 Plus
Dsim\GD11498-PA 765 GD11498-PA 1..756 26..774 2404 58.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:17:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15581-PA 780 GJ15581-PA 1..779 26..803 3175 73.8 Plus
Dvir\GJ20952-PA 763 GJ20952-PA 1..754 26..774 2365 57.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:17:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25821-PA 785 GK25821-PA 1..753 26..778 3313 79.4 Plus
Dwil\GK15906-PA 766 GK15906-PA 1..757 26..774 2410 58.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:17:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16021-PA 791 GE16021-PA 1..789 26..815 4107 95.8 Plus
Dyak\GE12095-PA 764 GE12095-PA 1..755 26..774 2386 58 Plus

FI06517.hyp Sequence

Translation from 1 to 2457

> FI06517.hyp
VHQIYKIFPKRKGRKRVNNSHKIYTMLRIPGMPLLPGTLFRDVSKGHYPK
PQSLANVQGLSMLSDRQQPAPVESGSVTVDISCPPVGASSIYPPRSGPRM
PPWLAYDKKVLCFHAYFKQTLQEVYHAPYLVRKVKIYYYLEDGTLEIYEP
RVDNSGIVQGCVVHRQRVQKAPPCDNEFMSLIDLNVDQTVQIFDRQYHIT
DCDPFTRTFLNKRGITVPDPVKSPCDPTEEQRKRENQPRSGNLIPKNHPF
AQFLKYDRQILKFQAYWDDRTEFGDVRKLELCYYLSDDTIEIKEQHIRNS
GRDGPTVFLKRGRLAREFEGLQLPGQMTPMTLLNVLGTNMRNVRYCVDPL
NTGNKEIHYYREKDLQIGSVINVYGRAVVITELDPFTQNYYRQRYGIQDF
TPLPIPARSDDCADHRSERQLPPYNGWGSYEDSVGNCISVEPKPPKSDFK
KFIKYDRYVLRFGAKMLSTIKANCERIFVISYYLCDDTLQIQEIAVRNSG
FLGGEFMKRTRLELPGQERFSCKQPQYYMPWNFFVGSTMSLKDFIFHIVS
ADEYTLMYMEHHPEIFPHANVGVIMEKVKSALQNRMAEFVGSCVPDCTDL
EKKRDVFVSFESFKGALISIMGNQISDHEIISLCRHFSAEKSQPNACDRS
TVRAAAHLELKRTLWNARDDLMEHFHHINPTNQPFLPEVKVRSALRGCRL
PFSLELIDNILSILNRNECDDIEVCDLMNFIDVSCGKGCDMLPVNHAFEL
CPKIPFLNKGRVVNFTCFLRELNLPLNLPAGGEKNNDAIAEGGRIMPPSA
MPDTDAHKANEDDAQHMA*

FI06517.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:26:30
Subject Length Description Subject Range Query Range Score Percent Strand
Efhc1.1-PA 793 CG8959-PA 1..793 26..818 4269 100 Plus
Efhc1.2-PA 765 CG11048-PA 1..756 26..774 2385 58.5 Plus