Clone FI06575 Report

Search the DGRC for FI06575

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:65
Well:75
Vector:pOT2
Associated Gene/TranscriptWRNexo-RA
Protein status:FI06575.pep: gold
Sequenced Size:1473

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7670 2008-12-18 5.12 accounting

Clone Sequence Records

FI06575.complete Sequence

1473 bp assembled on 2008-10-27

GenBank Submission: BT050502.1

> FI06575.complete
AAGAAAACGAACAAGCAACGCGGGTTATGGAAAAATATTTAACAAAAATG
CCCATCAAATCAAAAGCAAATGAAGTTCCCAAGGAAGAGGCGGGCGTCAA
AAAGGAGACTCCCAAAGTGGCAAGGAAAGCAACAAAAAAGGATACTCCAA
AAGAGTTGAAAGATAAAGAAAATGCTGGAGATGATAATACGCCAAAGCAA
ACGAAAGGAAGACCCGGTAGACCGGCTGCCAAGCGAAAAAATCTGGATAC
TCCAGATGTGACTGAGAAGTTAGCGATGGAGGAAGAAAATCCGCCCAAGC
GCCGGAGTTCCAGGCTGACCAGAAGCACTCGTTCAATGGCAGAGGATGGG
TCTCCATCACCGGAGAAGGAAAAGCCCGAAAAGCTTCCCTTTATTAAATA
CAAGGGTGCTATAAAGTATTTCACGGAGAGCCAGGATATTGCGGCATCTG
CTGACGATGTTTTGCAATGGGTGGAAAAACAAAAAGATGAGGTAGTGCCC
ATGGCCTTCGACATGGAGTGGCCCTTCTCTTTCCAAACAGGACCTGGCAA
GTCTGCCGTCATCCAGATATGCGTGGATGAAAAGTGCTGCTACATATACC
AGCTGACTAATGTGAAGAAACTGCCTGCGGCCCTGGTGGCCCTTATCAAT
CATCCCAAAGTGCGATTGCATGGCGTGAACATAAAGAACGATTTCCGAAA
GCTGGCACGTGATTTCCCCGAGGTTACAGCCGAACCACTGATAGAGAAAT
GTGTGGACTTGGGTCTTTGGTGCAATGAGGTCTGTGAGACCGGCGGGCGC
TGGAGCTTGGAGCGATTAACCAACTTTATAGCCAAAAAGGCCATGGACAA
AAGCAAGAAGGTGCGCATGAGCAAGTGGCATGTCATTCCGCTGGACGAGA
ATCAACTAATGTACGCCGCCATCGATGTCTATATTGGTCAGGTTATCTAT
CGTGAATTGGAACGCCGCGAGAAGGTCAAGATTAAAAATGAAGAAGAGTT
CAAGGAAAAGAACGGAGATGCTGCCTTTAAAGCAATGAAAGCATTGGGAG
AGACATTTCTGACCAAGATCAACGAGGTGACTCTGTAAGCTTTTCTTTGA
AGTTTCAGATATGCCATCTAATTCCTTTTACCTGTTTAAATATTTTCGCT
TTCTTTCATTTATTTTCGGGAGTTTTTCTTAGTTTAATTTGTTACCAACG
TGCTGCAAAATAATTGTTAAATTTAATATTGCTATCCAATTCGATTATTG
ATTACGATAACATTTATAGAATTGTTTATACCTAAATGTACAAATTATAA
ACACATTTTGATGCATTGACTTTGATCGGAACGAAATTTTACTAGTACTA
TACATTTTTGCATGAATTCTAGTTGGTTTATAAATTCCCTTAAAATTATA
TTAAGATTATTCCGTTTTCTACACTTTTCAACTTGCAATAAATTTTAATT
TTGTAAAAAAAAAAAAAAAAAAA

FI06575.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:11:46
Subject Length Description Subject Range Query Range Score Percent Strand
WRNexo-RA 1532 WRNexo-RA 75..1531 1..1457 7180 99.5 Plus
WRNexo-RB 1535 WRNexo-RB 75..1534 1..1457 7125 99.3 Plus
WRNexo.a 1513 WRNexo.a 60..1513 1..1454 7040 99.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:01:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14188452..14188974 1454..933 2520 99.2 Minus
chr3R 27901430 chr3R 14189031..14189274 932..689 1190 99.2 Minus
chr3R 27901430 chr3R 14189330..14189554 688..464 1125 100 Minus
chr3R 27901430 chr3R 14189616..14189818 464..262 985 99 Minus
chr3R 27901430 chr3R 14189881..14189987 260..154 505 98.1 Minus
chr3R 27901430 chr3R 14190243..14190329 87..1 435 100 Minus
chr3R 27901430 chr3R 14190119..14190187 155..87 345 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:01:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18364241..18364765 1457..933 2550 99 Minus
3R 32079331 3R 18364822..18365065 932..689 1190 99.2 Minus
3R 32079331 3R 18365121..18365345 688..464 1125 100 Minus
3R 32079331 3R 18365407..18365611 464..260 1025 100 Minus
3R 32079331 3R 18365672..18365778 260..154 535 100 Minus
3R 32079331 3R 18366035..18366121 87..1 435 100 Minus
3R 32079331 3R 18365911..18365979 155..87 345 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18105072..18105596 1457..933 2550 99 Minus
3R 31820162 3R 18105653..18105896 932..689 1190 99.1 Minus
3R 31820162 3R 18105952..18106176 688..464 1125 100 Minus
3R 31820162 3R 18106238..18106442 464..260 1025 100 Minus
3R 31820162 3R 18106503..18106609 260..154 535 100 Minus
3R 31820162 3R 18106866..18106952 87..1 435 100 Minus
3R 31820162 3R 18106742..18106810 155..87 345 100 Minus
Blast to na_te.dros performed 2019-03-15 15:01:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dm88 4558 Dm88 DM88 4558bp 4230..4415 1452..1258 124 57.6 Minus
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 345..400 1174..1227 113 69.6 Plus

FI06575.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:03:04 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14188452..14188974 933..1454 99 <- Minus
chr3R 14189031..14189274 689..932 99 <- Minus
chr3R 14189330..14189554 464..688 100 <- Minus
chr3R 14189617..14189819 261..463 98 <- Minus
chr3R 14189881..14189985 156..260 98 <- Minus
chr3R 14190119..14190187 87..155 100 <- Minus
chr3R 14190244..14190329 1..86 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:54:26 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
CG7670-RA 1..1062 27..1088 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:17:11 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
WRNexo-RA 1..1062 27..1088 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:59:04 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
WRNexo-RA 1..1062 27..1088 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:23:28 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
WRNexo-RA 1..1062 27..1088 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:57:00 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
CG7670-RA 17..1470 1..1454 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:17:11 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
WRNexo-RA 56..1509 1..1454 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:59:04 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
WRNexo-RA 42..1495 1..1454 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-27 13:48:34 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
CG7670-RA 17..1470 1..1454 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:23:28 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
WRNexo-RA 42..1495 1..1454 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:03:04 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18364244..18364765 933..1454 99 <- Minus
3R 18364822..18365065 689..932 99 <- Minus
3R 18365121..18365345 464..688 100 <- Minus
3R 18365408..18365610 261..463 100 <- Minus
3R 18365672..18365776 156..260 100 <- Minus
3R 18365911..18365979 87..155 100 <- Minus
3R 18366036..18366121 1..86 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:03:04 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18364244..18364765 933..1454 99 <- Minus
3R 18364822..18365065 689..932 99 <- Minus
3R 18365121..18365345 464..688 100 <- Minus
3R 18365408..18365610 261..463 100 <- Minus
3R 18365672..18365776 156..260 100 <- Minus
3R 18365911..18365979 87..155 100 <- Minus
3R 18366036..18366121 1..86 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:03:04 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18364244..18364765 933..1454 99 <- Minus
3R 18364822..18365065 689..932 99 <- Minus
3R 18365121..18365345 464..688 100 <- Minus
3R 18365408..18365610 261..463 100 <- Minus
3R 18365672..18365776 156..260 100 <- Minus
3R 18365911..18365979 87..155 100 <- Minus
3R 18366036..18366121 1..86 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:59:04 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14189966..14190487 933..1454 99 <- Minus
arm_3R 14190544..14190787 689..932 99 <- Minus
arm_3R 14190843..14191067 464..688 100 <- Minus
arm_3R 14191130..14191332 261..463 100 <- Minus
arm_3R 14191394..14191498 156..260 100 <- Minus
arm_3R 14191633..14191701 87..155 100 <- Minus
arm_3R 14191758..14191843 1..86 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:48:15 Download gff for FI06575.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18105075..18105596 933..1454 99 <- Minus
3R 18105653..18105896 689..932 99 <- Minus
3R 18105952..18106176 464..688 100 <- Minus
3R 18106239..18106441 261..463 100 <- Minus
3R 18106503..18106607 156..260 100 <- Minus
3R 18106742..18106810 87..155 100 <- Minus
3R 18106867..18106952 1..86 100   Minus

FI06575.pep Sequence

Translation from 2 to 1087

> FI06575.pep
ENEQATRVMEKYLTKMPIKSKANEVPKEEAGVKKETPKVARKATKKDTPK
ELKDKENAGDDNTPKQTKGRPGRPAAKRKNLDTPDVTEKLAMEEENPPKR
RSSRLTRSTRSMAEDGSPSPEKEKPEKLPFIKYKGAIKYFTESQDIAASA
DDVLQWVEKQKDEVVPMAFDMEWPFSFQTGPGKSAVIQICVDEKCCYIYQ
LTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVTAEPLIEKC
VDLGLWCNEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDEN
QLMYAAIDVYIGQVIYRELERREKVKIKNEEEFKEKNGDAAFKAMKALGE
TFLTKINEVTL*

FI06575.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:07:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18118-PA 340 GF18118-PA 9..340 32..361 1409 81.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:07:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16480-PA 354 GG16480-PA 1..354 9..361 1705 90.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19231-PA 331 GH19231-PA 1..331 9..361 1311 71 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:30
Subject Length Description Subject Range Query Range Score Percent Strand
WRNexo-PA 353 CG7670-PA 1..353 9..361 1843 100 Plus
WRNexo-PB 354 CG7670-PB 1..354 9..361 1831 99.7 Plus
WRNexo-PC 353 CG7670-PC 1..353 9..361 1814 99.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24264-PA 329 GI24264-PA 1..329 9..361 1356 73.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23198-PA 348 GL23198-PA 1..348 16..361 1481 80.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20513-PA 356 GA20513-PA 1..356 9..361 1506 79.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18710-PA 347 GM18710-PA 1..347 16..361 1779 97.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:07:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20178-PA 354 GD20178-PA 1..354 9..361 1815 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10837-PA 323 GJ10837-PA 19..323 61..361 1313 79 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11496-PA 349 GK11496-PA 1..349 16..361 1360 73.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:07:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25207-PA 354 GE25207-PA 1..354 9..361 1724 92.1 Plus

FI06575.hyp Sequence

Translation from 2 to 1087

> FI06575.hyp
ENEQATRVMEKYLTKMPIKSKANEVPKEEAGVKKETPKVARKATKKDTPK
ELKDKENAGDDNTPKQTKGRPGRPAAKRKNLDTPDVTEKLAMEEENPPKR
RSSRLTRSTRSMAEDGSPSPEKEKPEKLPFIKYKGAIKYFTESQDIAASA
DDVLQWVEKQKDEVVPMAFDMEWPFSFQTGPGKSAVIQICVDEKCCYIYQ
LTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVTAEPLIEKC
VDLGLWCNEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDEN
QLMYAAIDVYIGQVIYRELERREKVKIKNEEEFKEKNGDAAFKAMKALGE
TFLTKINEVTL*

FI06575.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:27:04
Subject Length Description Subject Range Query Range Score Percent Strand
WRNexo-PA 353 CG7670-PA 1..353 9..361 1843 100 Plus
WRNexo-PB 354 CG7670-PB 1..354 9..361 1831 99.7 Plus
WRNexo-PC 353 CG7670-PC 1..353 9..361 1814 99.4 Plus