Clone FI06768 Report

Search the DGRC for FI06768

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:67
Well:68
Vector:pOT2
Associated Gene/TranscriptRef2-RA
Protein status:FI06768.pep: gold
Sequenced Size:929

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
ref2 2008-12-18 5.12 accounting

Clone Sequence Records

FI06768.complete Sequence

929 bp assembled on 2008-08-25

GenBank Submission: BT044306.1

> FI06768.complete
TTTTGATCACTTAACCAAATACAGGATTTCTGCACTATCTCGCAACATGT
CAGATAAGATGAAAATGAGCCTTGACGACATTATCAAGATGAAATTTAAT
AAGAACAAGTTTGTTAATGCCAAAAATGAACGTGTTCAAGGAGGATCGAT
CAGAAAGCGAAATTCAGAAGGCGGACTTAGAGGAATTCAAAGGTCCCGCA
ACGGAACTGGATTCATTCGGAAGAGCAAATTCAAACAGGAAACCCTTTTG
AAGCCGCCAAAAAAACCGACTCTTGTCATGGTTTGCAATTTGGATTACGG
AGTGGATGATGACGACATCATGGAGCTTTTCAATCAAGACGGCGTGGTGG
AGAAAGGTTTTGTGCACTATGATCGCGATGGTAACTCATTGGGCACCGCT
CACTTGTCGTTCAAATATCGCGAAGAGGCCTTCCAGATCATCGAGCAGTT
CCACGGAGTCCGTTTGGATGGACGCCGATTGAAATTACATCTCGTACAAA
ACACAAGAAATTTTAAACGCACTGATGTCGATGATCTTTCCTTGCGGATG
GGTTCTTTCAAGACTCGTTTCTTGCAGAATGGTACTTTTAAGACTCGTTC
CTTGCAGAATGGTTTTCAGAAGTCTCGTCTTTTTCGCAATAGTTCCTTCA
AGCCTCGTCCTTTCAAGAAACATAACTTTAAGTCTCGAGCGTTCGATACT
GATTTCTAAGACCTTCTAGCGAAATGGATACTTTGTCCTGCTACAGCCTC
AAATTAGATCAGAATTTTATGCCGAAAACAATTGGGGGGACTTTTCGGAT
CGCAAATAAAGCATAATATACCCATAAATTAACATGAATACACATATGAA
TAATGAATCTTGGTACAAAGGAATTACACTGTTCAGATAATAATAAATGT
ACTTACATATGAAAAAAAAAAAAAAAAAA

FI06768.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
ref2-RA 959 ref2-RA 44..956 1..913 4565 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12609214..12610093 911..32 4400 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12610515..12611396 913..32 4410 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12610515..12611396 913..32 4410 100 Minus
2L 23513712 2L 12611445..12611476 32..1 160 100 Minus
Blast to na_te.dros performed on 2019-03-15 18:39:57 has no hits.

FI06768.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:40:37 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12609214..12610092 33..911 100 <- Minus
chr2L 12610142..12610173 1..32 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:54:39 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
ref2-RA 1..663 47..709 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:21 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
ref2-RA 1..663 47..709 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:26:57 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
Ref2-RA 1..663 47..709 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:46 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
ref2-RA 1..663 47..709 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:39 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
Ref2-RA 1..663 47..709 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:08:27 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
ref2-RA 1..886 26..911 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:21 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
ref2-RA 1..886 26..911 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:26:57 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
Ref2-RA 1..911 1..911 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:05:05 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
ref2-RA 1..886 26..911 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:39 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
Ref2-RA 1..911 1..911 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:37 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12610517..12611395 33..911 100 <- Minus
2L 12611445..12611476 1..32 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:37 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12610517..12611395 33..911 100 <- Minus
2L 12611445..12611476 1..32 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:37 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12610517..12611395 33..911 100 <- Minus
2L 12611445..12611476 1..32 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:26:57 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12610517..12611395 33..911 100 <- Minus
arm_2L 12611445..12611476 1..32 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:36 Download gff for FI06768.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12610517..12611395 33..911 100 <- Minus
2L 12611445..12611476 1..32 100   Minus

FI06768.pep Sequence

Translation from 1 to 708

> FI06768.pep
FDHLTKYRISALSRNMSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSI
RKRNSEGGLRGIQRSRNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLDYG
VDDDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQF
HGVRLDGRRLKLHLVQNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRS
LQNGFQKSRLFRNSSFKPRPFKKHNFKSRAFDTDF*

FI06768.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17326-PA 275 GF17326-PA 72..235 63..220 230 36 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10249-PA 222 GG10249-PA 1..187 16..227 572 54.2 Plus
Dere\GG10124-PA 266 GG10124-PA 1..200 16..176 269 37.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18594-PA 274 GH18594-PA 1..205 16..176 224 34 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
Ref2-PC 220 CG17031-PC 1..220 16..235 1148 100 Plus
Ref2-PB 220 CG17031-PB 1..220 16..235 1148 100 Plus
Ref2-PA 220 CG17031-PA 1..220 16..235 1148 100 Plus
Ref1-PA 266 CG1101-PA 1..229 16..207 253 34.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23076-PA 277 GI23076-PA 118..215 89..184 225 48 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12678-PA 284 GL12678-PA 121..202 89..170 225 51.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10707-PA 284 GA10707-PA 121..202 89..170 225 51.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26087-PA 207 GM26087-PA 1..204 16..231 809 74.1 Plus
Dsec\GM10513-PA 266 GM10513-PA 1..230 16..208 266 34.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22109-PA 210 GD22109-PA 1..204 16..231 803 72.7 Plus
Dsim\GD19510-PA 273 GD19510-PA 1..230 16..208 266 34.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22697-PA 274 GJ22697-PA 1..213 16..185 257 34.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12741-PA 280 GK12741-PA 120..212 89..176 220 48.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:24:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12174-PA 249 GE12174-PA 1..195 20..223 565 54.1 Plus
Dyak\GE25821-PA 266 GE25821-PA 1..200 16..176 259 37.4 Plus

FI06768.hyp Sequence

Translation from 1 to 708

> FI06768.hyp
FDHLTKYRISALSRNMSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSI
RKRNSEGGLRGIQRSRNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLDYG
VDDDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQF
HGVRLDGRRLKLHLVQNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRS
LQNGFQKSRLFRNSSFKPRPFKKHNFKSRAFDTDF*

FI06768.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:27:53
Subject Length Description Subject Range Query Range Score Percent Strand
Ref2-PC 220 CG17031-PC 1..220 16..235 1148 100 Plus
Ref2-PB 220 CG17031-PB 1..220 16..235 1148 100 Plus
Ref2-PA 220 CG17031-PA 1..220 16..235 1148 100 Plus
Ref1-PA 266 CG1101-PA 1..229 16..207 253 34.8 Plus