Clone FI06804 Report

Search the DGRC for FI06804

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:68
Well:4
Vector:pBS SK-
Associated Gene/TranscriptmRpL15-RA
Protein status:FI06804.pep: gold
Sequenced Size:950

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
mRpL15 2008-12-18 5.12 accounting

Clone Sequence Records

FI06804.complete Sequence

950 bp assembled on 2008-11-04

GenBank Submission: BT050572.1

> FI06804.complete
AATAAATTAAGTTAACTTCGGTATGGCACACCTGCGGGAGACCTCGGACA
AGGCGCTGAAGCTGTTGCGTACTTTACCGCGCGTTCAAATCGGCAATCTG
CGACCAAATCCAAACTCAAAACAGAATGACAAGCGCGGCAGGGCACAACA
CGGAGGAGATAAGCACGGAGCGGGCAACAAGGGATCCGGTCAGCGGCAGA
ACTTCATGCGATTGGGCTATGAAACGGGCAATCAGCCCTTCTACTTGAGA
TTTCCCTACGAGCCCTACTACAAGGGACACCACCTAAAGCGCCAGTATCC
GCCCATTTCGCTGCTCCAACTGCAAGTGCTCATCGACACGAACCGCATAG
ACATCAGCCAGCCCATCGACATCAGCACGCTGTGTAACTCTGGCCTCCTG
AAACTGAAACCCGCTGAAATGGAGTACGGTTTCCAGCTGACGGACGATGG
GCTGGACAATTTCCAGGCTAAGATCAACATTGAGGTGCAGCACGCCAGCG
AGGCGGTCATAGCGGCCATAGAGAAGAACGGCGGTGTAATCCGTACGGCC
TATTACGATCCACGCAGCCTTCACATGCTGGCCAATCCGAAGAAGTGGTT
CGAAAAGGGAGTACCTATTCCTAGCCGCATGCTGCCGCCCCAGGATGCAG
TGGACTACTATACGGATCCCAAGAATCGCGGCTACCTGGCCAATCCCGAG
GCGATCAGCCAGGACCGCCTAGTTCTGGCCCAGAAGTACGGCTATCAGCT
GCCCAAAATTGAGGAAGATTCCGCGTACGAGATGCTCACCACAGCGAAGG
ATCCAAGGCAAGTATTCTACGGCCTGGAACCCGGCTGGCTGATCAACATA
GTGGACAAAACGATCATTAAGCGCAAGCAATAATTAGTCGAGGTTGTTAC
TATGCATTTTGTTAAATAAAGAATTGGATTACAAAAAAAAAAAAAAAAAA

FI06804.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:12:37
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL15-RA 1040 mRpL15-RA 94..1030 1..937 4685 100 Plus
Psn-RB 2037 Psn-RB 1955..2037 937..855 415 100 Minus
Psn-RA 2079 Psn-RA 1997..2079 937..855 415 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:46:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20424119..20424923 932..128 4010 99.9 Minus
chr3L 24539361 chr3L 20424994..20425121 128..1 640 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:46:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20435105..20435914 937..128 4050 100 Minus
3L 28110227 3L 20435985..20436112 128..1 640 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:30:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20428205..20429014 937..128 4050 100 Minus
3L 28103327 3L 20429085..20429212 128..1 640 100 Minus
Blast to na_te.dros performed on 2019-03-15 18:46:18 has no hits.

FI06804.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:47:14 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20424119..20424923 128..932 99 <- Minus
chr3L 20424995..20425111 11..127 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:54:43 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:18:24 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:30:27 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:00:05 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:58:49 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 60..991 1..932 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:18:24 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 60..991 1..932 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:30:27 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 98..1029 1..932 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-11-04 16:37:01 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 60..991 1..932 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:00:05 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL15-RA 98..1029 1..932 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:47:14 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20435110..20435914 128..932 100 <- Minus
3L 20435986..20436112 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:47:14 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20435110..20435914 128..932 100 <- Minus
3L 20435986..20436112 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:47:14 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20435110..20435914 128..932 100 <- Minus
3L 20435986..20436112 1..127 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:30:27 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20428210..20429014 128..932 100 <- Minus
arm_3L 20429086..20429212 1..127 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:49:37 Download gff for FI06804.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20428210..20429014 128..932 100 <- Minus
3L 20429086..20429212 1..127 100   Minus

FI06804.pep Sequence

Translation from 22 to 882

> FI06804.pep
MAHLRETSDKALKLLRTLPRVQIGNLRPNPNSKQNDKRGRAQHGGDKHGA
GNKGSGQRQNFMRLGYETGNQPFYLRFPYEPYYKGHHLKRQYPPISLLQL
QVLIDTNRIDISQPIDISTLCNSGLLKLKPAEMEYGFQLTDDGLDNFQAK
INIEVQHASEAVIAAIEKNGGVIRTAYYDPRSLHMLANPKKWFEKGVPIP
SRMLPPQDAVDYYTDPKNRGYLANPEAISQDRLVLAQKYGYQLPKIEEDS
AYEMLTTAKDPRQVFYGLEPGWLINIVDKTIIKRKQ*

FI06804.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24133-PA 286 GF24133-PA 1..285 1..285 1475 95.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:41:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13310-PA 286 GG13310-PA 1..286 1..286 1512 99 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:41:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17019-PA 287 GH17019-PA 1..285 1..285 1380 87.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL15-PA 286 CG5219-PA 1..286 1..286 1514 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:41:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11913-PA 287 GI11913-PA 1..285 1..285 1388 87.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12778-PA 286 GL12778-PA 1..286 1..286 1447 92.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18745-PA 286 GA18745-PA 1..286 1..286 1444 92.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22214-PA 286 GM22214-PA 1..286 1..286 1519 99.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12186-PA 286 GD12186-PA 1..286 1..286 1519 99.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:41:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13787-PA 287 GJ13787-PA 1..285 1..285 1396 88.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12288-PA 286 GK12288-PA 1..285 1..285 1386 89.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22744-PA 286 GE22744-PA 1..286 1..286 1512 99 Plus

FI06804.hyp Sequence

Translation from 22 to 882

> FI06804.hyp
MAHLRETSDKALKLLRTLPRVQIGNLRPNPNSKQNDKRGRAQHGGDKHGA
GNKGSGQRQNFMRLGYETGNQPFYLRFPYEPYYKGHHLKRQYPPISLLQL
QVLIDTNRIDISQPIDISTLCNSGLLKLKPAEMEYGFQLTDDGLDNFQAK
INIEVQHASEAVIAAIEKNGGVIRTAYYDPRSLHMLANPKKWFEKGVPIP
SRMLPPQDAVDYYTDPKNRGYLANPEAISQDRLVLAQKYGYQLPKIEEDS
AYEMLTTAKDPRQVFYGLEPGWLINIVDKTIIKRKQ*

FI06804.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL15-PA 286 CG5219-PA 1..286 1..286 1514 100 Plus