Clone FI06810 Report

Search the DGRC for FI06810

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:68
Well:10
Vector:pBS SK-
Associated Gene/TranscriptCG5335-RA
Protein status:FI06810.pep: gold
Sequenced Size:1295

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5335 2008-12-18 5.12 accounting

Clone Sequence Records

FI06810.complete Sequence

1295 bp assembled on 2008-11-04

GenBank Submission: BT050574.1

> FI06810.complete
CTTCGGGCGAGAACAAAACAAATAACAGCGCTTAAAAACCAAAAACACAA
GATATAGAAAACTTCGGCGTTTGTATCGGTTACTTGAGCAACCCGCCGCT
CCGCCCATCACTGATTAGATAAAGTTTTAACATTTGGGAGAGCCGGAGAA
CTCCGGACTCTCCCACGGAACTATAAAACACATTTTGCGCTTGATTGTTC
AGTACAAAGGCGATAGTTAGTTGAATTGGTAATTGCAGGAAGGAATCATG
TTGACCGAATTCGCTGGCAATCTATCGCATCCGCTGGAGTTTGGTCATGT
TCTGGAGGTCGTGGCCAAGACCATCGATGGAGCAGCCAGGTTCCACATTA
ACCTCTGCACGGCCAAGAGCACGGTCGATCCGAACGCAGATATTGGGCTA
CGCTTCTCATGCTATTTTCGGAACGATGTGATCGTTCGAAATTCCCGGAT
AAACGGCGCCTGGGGCGAGGAGGAGTCCCATGTCATGGACCCCAACACCC
TGCCCAATCCCATCGTCAGTGGCGAGTTCTTTTTGGTCTACATTCTTTGT
TGCGAGGACAGCTTTGCCATCTCGATAAATAGCCGAGAGTTCTGCAGATT
CCGCTACCGCATGCCGTTGGGAACGATTCGTGCTCTGGAGATCCGTGATC
AGATCCAAGTCATTAAACAGGTGGATCATCGTACTGTGTTTCCAAATCCG
TGGCCAGCCGTTCACGCCTCGGACTACTTTAAGGCGTTCAGTAACGATCA
GCCAATTTTGTTTAGTCCGGGCCATGTGATTGTCCTTACAGCTCGGTGTT
TCGAGAATAAAAAGGGACAGTTCATAATCAAGTTCATGGACTCGGATACC
AAGCGCGAGGAGCTACACTTCAGTGTGCGTTTCGATGAGAAGGCAGTAGT
GCGCAATTCCATGAACAAAAATTTTGAATTCGGAAGCGAGGAGCGCCATG
GAGGTTTCCCCTTCGTCTTTAACCAGCAATTCAAGCTGGCGCTTGCGTTT
ACGGAACGCGAGGTTTTGACTGCCGTGGACGGTTATAACTTCTTTAGCTA
CACCTGGCGCACACCCAATGCCATGATGAATCTAGTGGGTTTCAAGGTGA
CAAGCATAAATGGCCTGGTAGTGCAGATAACTGGTGTGGATCACCTGCAG
ACGGGGGATCCTACGTGCGCTGGCTTCGAAAAATATTCCCGCCATGATTA
CGAATGTGTTTAGTAACCATATTAACCCAACTAATGAAGTCTGAAAATAC
AATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI06810.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG5335-RA 1385 CG5335-RA 104..1355 1..1252 6125 99.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:44:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14509123..14509712 338..927 2875 99.2 Plus
chr2R 21145070 chr2R 14508669..14509009 1..341 1645 98.8 Plus
chr2R 21145070 chr2R 14509769..14510093 928..1252 1520 97.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18621999..18622588 338..927 2935 99.8 Plus
2R 25286936 2R 18621545..18621885 1..341 1690 99.7 Plus
2R 25286936 2R 18622645..18622969 928..1252 1520 97.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18623198..18623787 338..927 2935 99.8 Plus
2R 25260384 2R 18622744..18623084 1..341 1690 99.7 Plus
2R 25260384 2R 18623844..18624168 928..1252 1520 97.8 Plus
Blast to na_te.dros performed on 2019-03-16 21:44:30 has no hits.

FI06810.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:45:24 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14508669..14509007 1..339 98 -> Plus
chr2R 14509125..14509712 340..927 99 -> Plus
chr2R 14509769..14510094 928..1255 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:54:49 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 1..966 248..1213 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:19:08 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 1..966 248..1213 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:01:38 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 1..966 248..1213 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:30:34 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 1..966 248..1213 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:59:50 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 1..1253 1..1254 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:19:07 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 1..1253 1..1254 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:01:38 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 5..1257 1..1255 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-11-04 17:43:53 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 1..1253 1..1254 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:30:34 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
CG5335-RA 5..1257 1..1255 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:45:24 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18621545..18621883 1..339 99 -> Plus
2R 18622001..18622588 340..927 99 -> Plus
2R 18622645..18622970 928..1255 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:45:24 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18621545..18621883 1..339 99 -> Plus
2R 18622001..18622588 340..927 99 -> Plus
2R 18622645..18622970 928..1255 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:45:24 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18621545..18621883 1..339 99 -> Plus
2R 18622001..18622588 340..927 99 -> Plus
2R 18622645..18622970 928..1255 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:01:38 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14509050..14509388 1..339 99 -> Plus
arm_2R 14509506..14510093 340..927 99 -> Plus
arm_2R 14510150..14510475 928..1255 97   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:50:25 Download gff for FI06810.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18622744..18623082 1..339 99 -> Plus
2R 18623200..18623787 340..927 99 -> Plus
2R 18623844..18624169 928..1255 97   Plus

FI06810.hyp Sequence

Translation from 247 to 1212

> FI06810.hyp
MLTEFAGNLSHPLEFGHVLEVVAKTIDGAARFHINLCTAKSTVDPNADIG
LRFSCYFRNDVIVRNSRINGAWGEEESHVMDPNTLPNPIVSGEFFLVYIL
CCEDSFAISINSREFCRFRYRMPLGTIRALEIRDQIQVIKQVDHRTVFPN
PWPAVHASDYFKAFSNDQPILFSPGHVIVLTARCFENKKGQFIIKFMDSD
TKREELHFSVRFDEKAVVRNSMNKNFEFGSEERHGGFPFVFNQQFKLALA
FTEREVLTAVDGYNFFSYTWRTPNAMMNLVGFKVTSINGLVVQITGVDHL
QTGDPTCAGFEKYSRHDYECV*

FI06810.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:28:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5335-PA 321 CG5335-PA 1..321 1..321 1714 100 Plus
CG13950-PA 316 CG13950-PA 14..273 15..270 221 26.9 Plus

FI06810.pep Sequence

Translation from 247 to 1212

> FI06810.pep
MLTEFAGNLSHPLEFGHVLEVVAKTIDGAARFHINLCTAKSTVDPNADIG
LRFSCYFRNDVIVRNSRINGAWGEEESHVMDPNTLPNPIVSGEFFLVYIL
CCEDSFAISINSREFCRFRYRMPLGTIRALEIRDQIQVIKQVDHRTVFPN
PWPAVHASDYFKAFSNDQPILFSPGHVIVLTARCFENKKGQFIIKFMDSD
TKREELHFSVRFDEKAVVRNSMNKNFEFGSEERHGGFPFVFNQQFKLALA
FTEREVLTAVDGYNFFSYTWRTPNAMMNLVGFKVTSINGLVVQITGVDHL
QTGDPTCAGFEKYSRHDYECV*

FI06810.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11976-PA 321 GF11976-PA 1..321 1..321 1586 89.1 Plus
Dana\GF15081-PA 316 GF15081-PA 12..273 13..270 214 26.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21911-PA 321 GG21911-PA 1..321 1..321 1697 97.5 Plus
Dere\GG24753-PA 316 GG24753-PA 12..273 13..270 216 26.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20302-PA 321 GH20302-PA 1..320 1..320 1509 84.4 Plus
Dgri\GH11249-PA 316 GH11249-PA 14..273 15..270 223 28.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG5335-PA 321 CG5335-PA 1..321 1..321 1714 100 Plus
CG13950-PB 316 CG13950-PB 14..273 15..270 221 26.9 Plus
CG13950-PA 316 CG13950-PA 14..273 15..270 221 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19972-PA 321 GI19972-PA 1..320 1..320 1548 87.5 Plus
Dmoj\GI21857-PA 316 GI21857-PA 14..273 15..270 211 26.9 Plus
Dmoj\GI23146-PA 672 GI23146-PA 386..636 21..273 150 23.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17029-PA 321 GL17029-PA 1..321 1..321 1546 87.5 Plus
Dper\GL19503-PA 316 GL19503-PA 12..273 13..270 225 27.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18810-PA 321 GA18810-PA 1..321 1..321 1547 87.9 Plus
Dpse\GA24336-PA 321 GA24336-PA 1..321 1..321 1440 82.2 Plus
Dpse\GA12649-PA 316 GA12649-PA 14..273 15..270 228 27.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21902-PA 321 GM21902-PA 1..321 1..321 1700 97.5 Plus
Dsec\GM16774-PA 316 GM16774-PA 12..273 13..270 216 26.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11398-PA 321 GD11398-PA 1..321 1..321 1706 98.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21223-PA 321 GJ21223-PA 1..320 1..320 1586 89.7 Plus
Dvir\GJ17801-PA 316 GJ17801-PA 12..273 13..270 220 27.5 Plus
Dvir\GJ10448-PA 665 GJ10448-PA 364..629 14..273 189 24.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21966-PA 321 GK21966-PA 1..321 1..321 1547 86.6 Plus
Dwil\GK24442-PA 318 GK24442-PA 14..275 15..270 213 27.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11985-PA 321 GE11985-PA 1..321 1..321 1695 97.2 Plus
Dyak\GE17166-PA 316 GE17166-PA 14..273 15..270 220 26.9 Plus