Clone FI06908 Report

Search the DGRC for FI06908

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:69
Well:8
Vector:pBS SK-
Associated Gene/TranscriptHP1b-RA
Protein status:FI06908.pep: gold
Sequenced Size:1227

Clone Sequence Records

FI06908.complete Sequence

1227 bp assembled on 2009-10-23

GenBank Submission: BT100169.1

> FI06908.complete
CTGACAGGGATGGTAGAAAGGTTTCAGCTTTTTATTTAAAATGCGTTTAC
TGGCCAAGAGAGCGATAGTTGCCGATGGCGAGACCATGGAGTTGCCATCT
TGATTTCTTCTTCTTCTTCAATCTTTTTAATCGCACGTATAAATAAGTTT
TGGACGCCAAGAAAATAACAAAATTCGCAGTTGGAATAACACAATTAGCG
TAAAAGCACAATGGCCGAATTCTCAGTGGAACGCGTCGAGGACAAGCGAA
CGGTGAACGGACGAACGGAATACTATCTAAAGTGGAAGGGCTATCCGCGC
AGCGAAAACACCTGGGAGCCGGTGGAGAATCTCGACTGTCCAGACCTGAT
AGCCAACTTCGAGGAGTCGCTGAAGAACAACAAGAAGGAGACAAAGAAAC
GCCTGTCCACCTCCTCCACACCCGAATCCATACGCAGCAAACGCAAGAGC
TTCCTGGAGGACGATACCGAGGAGCAGAAGAAGCTGATCGGCTTCGAGCG
CGGTCTGGAGGCATCAAAAATACTGGGCGCCACCGACTCATCCGGGCACC
TAATGTTCCTCATGAAGTGGAAGGGCAGCGATCACGCCGACCTTGTGCCC
GCCAAGCTGGCCAACACTCGATGCCCCCAGGTGGTCATACAGTTCTATGA
GGAGCGCCTCACCTGGCACACGGGCAGCGGCAATGGTAATGGGAATACGA
ATTCCGTCAATTTGGGATCATCCGGTGGCCTGGGCTCCGTCGGCGGCAGT
GGGGCTGGCGATGATACTGCTCCCGGCAGCGTTGGCACCACCGGTGGCGG
CAGCAATATAGATGGCGGTGACGAGGAGGATCCCGAACCGGCTAGCCCCA
TTGGCAGCATCAATCAAGACGAGAATATCAAGCCGGACGAGAGTAGTGAG
CTGGACAACGGACAGCCGGATGCGGATGACTAGTTGAGTGGCAGATACAG
ATGACTGTTTCGGATTCACTCGCTTATGTGGATACATACACACCGGCTTT
ATACGATATATGTACATACATATTTCGTAGCGTAGCCCTTAAGATAAAAA
AATTGGACAAACTGAAGTTCTGGCGTCAGTCAGCGGTAGTATATACATAT
ACATATATACATATACATATATATACATACTTAATCTATAAGTTCAATTG
TAAAATTGTTTTTAACATCTACCTTTATTTTTGACCCACATAAATGTTTT
ATAAGCATATAAAAAAAAAAAAAAAAA

FI06908.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
HP1b-RA 1311 HP1b-RA 49..1260 1..1212 5970 99.5 Plus
HP1b-RB 1114 HP1b-RB 1..1114 97..1210 5495 99.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 8972972..8974161 21..1210 5935 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9081169..9082360 21..1212 5870 99.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 9089267..9090458 21..1212 5870 99.4 Plus
Blast to na_te.dros performed 2019-03-16 13:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Paris 1730 Dvir\Paris TV1 1730bp Derived from Z49253. 81..195 103..211 111 58.3 Plus
Dvir\Paris 1730 Dvir\Paris TV1 1730bp Derived from Z49253. 1536..1650 211..103 111 58.3 Minus

FI06908.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:11:25 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 8972866..8972886 1..21 100 -> Plus
chrX 8972973..8974161 22..1210 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-23 16:39:31 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
HP1b-RA 1..723 211..933 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:46:57 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
HP1b-RB 1..723 211..933 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:26:18 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
HP1b-RA 1..723 211..933 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:10:06 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
HP1b-RA 1..723 211..933 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-23 16:39:30 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
HP1b-RA 1..1210 1..1210 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:46:57 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
HP1b-RA 1..1210 1..1210 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:26:18 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
HP1b-RA 1..1210 1..1210 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:10:06 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
HP1b-RA 1..1210 1..1210 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:25 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
X 9081063..9081083 1..21 100 -> Plus
X 9081170..9082358 22..1210 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:25 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
X 9081063..9081083 1..21 100 -> Plus
X 9081170..9082358 22..1210 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:25 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
X 9081063..9081083 1..21 100 -> Plus
X 9081170..9082358 22..1210 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:26:18 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8975096..8975116 1..21 100 -> Plus
arm_X 8975203..8976391 22..1210 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:26:47 Download gff for FI06908.complete
Subject Subject Range Query Range Percent Splice Strand
X 9089161..9089181 1..21 100 -> Plus
X 9089268..9090456 22..1210 99   Plus

FI06908.hyp Sequence

Translation from 210 to 932

> FI06908.hyp
MAEFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANF
EESLKNNKKETKKRLSTSSTPESIRSKRKSFLEDDTEEQKKLIGFERGLE
ASKILGATDSSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVIQFYEERL
TWHTGSGNGNGNTNSVNLGSSGGLGSVGGSGAGDDTAPGSVGTTGGGSNI
DGGDEEDPEPASPIGSINQDENIKPDESSELDNGQPDADD*

FI06908.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:28:34
Subject Length Description Subject Range Query Range Score Percent Strand
HP1b-PB 240 CG7041-PB 1..240 1..240 1270 100 Plus
HP1b-PC 240 CG7041-PC 1..240 1..240 1270 100 Plus
HP1b-PA 240 CG7041-PA 1..240 1..240 1270 100 Plus
Su(var)205-PB 206 CG8409-PB 23..202 3..154 395 44.4 Plus
Su(var)205-PA 206 CG8409-PA 23..202 3..154 395 44.4 Plus

FI06908.pep Sequence

Translation from 210 to 932

> FI06908.pep
MAEFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANF
EESLKNNKKETKKRLSTSSTPESIRSKRKSFLEDDTEEQKKLIGFERGLE
ASKILGATDSSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVIQFYEERL
TWHTGSGNGNGNTNSVNLGSSGGLGSVGGSGAGDDTAPGSVGTTGGGSNI
DGGDEEDPEPASPIGSINQDENIKPDESSELDNGQPDADD*

FI06908.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19189-PA 227 GF19189-PA 1..226 1..237 905 81.9 Plus
Dana\GF15276-PA 210 GF15276-PA 23..206 4..154 357 41.8 Plus
Dana\GF16710-PA 231 GF16710-PA 8..134 4..148 303 41.8 Plus
Dana\GF17204-PA 197 GF17204-PA 49..189 3..152 183 30.2 Plus
Dana\GF13301-PA 132 GF13301-PA 55..110 95..150 151 51.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:47:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18283-PA 238 GG18283-PA 1..238 1..240 1006 94.6 Plus
Dere\GG23468-PA 205 GG23468-PA 23..201 4..154 389 44.1 Plus
Dere\GG11164-PA 237 GG11164-PA 8..158 4..171 309 38 Plus
Dere\GG24367-PA 106 GG24367-PA 4..91 76..173 215 42.9 Plus
Dere\GG16196-PA 170 GG16196-PA 22..167 3..158 192 29.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17802-PA 215 GH17802-PA 1..209 1..231 799 73.6 Plus
Dgri\GH10251-PA 203 GH10251-PA 24..199 4..154 362 41.5 Plus
Dgri\GH18923-PA 238 GH18923-PA 8..133 4..147 299 41.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:49
Subject Length Description Subject Range Query Range Score Percent Strand
HP1b-PB 240 CG7041-PB 1..240 1..240 1270 100 Plus
HP1b-PC 240 CG7041-PC 1..240 1..240 1270 100 Plus
HP1b-PA 240 CG7041-PA 1..240 1..240 1270 100 Plus
Su(var)205-PB 206 CG8409-PB 23..202 3..154 395 44.4 Plus
Su(var)205-PA 206 CG8409-PA 23..202 3..154 395 44.4 Plus
HP1c-PA 237 CG6990-PA 8..134 4..148 302 41.8 Plus
HP1e-PA 174 CG8120-PA 26..166 3..153 198 32.9 Plus
HP6-PA 106 CG15636-PA 15..77 90..152 192 58.7 Plus
rhi-PA 418 CG10683-PA 23..126 3..106 151 33 Plus
Oxp-PA 84 CG18186-PA 20..81 2..62 141 45.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15142-PA 211 GI15142-PA 1..209 1..235 840 75.3 Plus
Dmoj\GI20276-PA 180 GI20276-PA 1..170 1..168 497 58.1 Plus
Dmoj\GI15430-PA 226 GI15430-PA 25..222 4..154 353 38.4 Plus
Dmoj\GI23231-PA 234 GI23231-PA 8..176 4..191 310 35.4 Plus
Dmoj\GI24000-PA 171 GI24000-PA 19..162 2..150 230 33.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12976-PA 266 GL12976-PA 1..193 1..197 718 74.6 Plus
Dper\GL19396-PA 205 GL19396-PA 27..201 8..154 343 41.7 Plus
Dper\GL23765-PA 229 GL23765-PA 8..134 4..148 297 40.4 Plus
Dper\GL15653-PA 133 GL15653-PA 2..86 63..153 224 50 Plus
Dper\GL13026-PA 310 GL13026-PA 212..271 94..153 200 55 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\HP1B-PA 234 GA20053-PA 1..233 1..237 721 68 Plus
Dpse\HP1A-PA 205 GA21056-PA 27..201 8..154 343 41.7 Plus
Dpse\HP1C-PA 229 GA20011-PA 8..134 4..148 299 40.4 Plus
Dpse\GA26074-PA 140 GA26074-PA 2..94 63..158 221 51 Plus
Dpse\GA29223-PA 140 GA29223-PA 2..86 63..153 213 50 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13712-PA 240 GM13712-PA 1..240 1..240 1255 99.2 Plus
Dsec\GM13138-PA 206 GM13138-PA 24..202 4..154 399 44.7 Plus
Dsec\GM26466-PA 237 GM26466-PA 8..138 4..152 300 39.3 Plus
Dsec\GM23793-PA 176 GM23793-PA 26..173 3..160 219 32.7 Plus
Dsec\GM18083-PA 99 GM18083-PA 5..83 75..152 216 55.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16926-PA 240 GD16926-PA 1..240 1..240 1258 99.6 Plus
Dsim\GD22433-PA 206 GD22433-PA 24..202 4..154 387 43.6 Plus
Dsim\GD20982-PA 237 GD20982-PA 8..134 4..148 300 40.4 Plus
Dsim\GD18604-PA 176 GD18604-PA 26..173 3..160 213 32.1 Plus
Dsim\HP6-PA 112 GD22699-PA 5..84 75..153 209 53.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22004-PA 183 GJ22004-PA 1..157 1..160 511 61.3 Plus
Dvir\GJ19002-PA 128 GJ19002-PA 1..125 82..234 403 62.1 Plus
Dvir\Su(var)205-PA 213 GJ17281-PA 24..209 4..154 355 41.5 Plus
Dvir\GJ22891-PA 235 GJ22891-PA 8..140 4..155 319 41.2 Plus
Dvir\GJ23632-PA 174 GJ23632-PA 18..160 3..150 242 35.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16242-PA 277 GK16242-PA 1..232 1..228 771 72.2 Plus
Dwil\GK14980-PA 205 GK14980-PA 21..201 4..154 344 42 Plus
Dwil\GK11473-PA 239 GK11473-PA 8..134 4..148 310 42.5 Plus
Dwil\GK13747-PA 176 GK13747-PA 24..176 3..151 247 36.8 Plus
Dwil\GK15187-PA 369 GK15187-PA 16..165 3..160 225 35.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15815-PA 240 GE15815-PA 1..240 1..240 1017 95.8 Plus
Dyak\Su(var)205-PA 205 GE11133-PA 23..201 4..154 403 45.8 Plus
Dyak\GE10331-PA 238 GE10331-PA 8..158 4..171 311 38.2 Plus
Dyak\GE14704-PA 108 GE14704-PA 11..74 87..152 229 60.6 Plus
Dyak\GE25940-PA 173 GE25940-PA 26..170 3..158 212 32.1 Plus