Clone FI07204 Report

Search the DGRC for FI07204

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:72
Well:4
Vector:pFlc-1
Associated Gene/Transcriptmei-38-RA
Protein status:FI07204.pep: gold
Sequenced Size:1318

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
ssp1 2008-08-15 Release 5.9 accounting
ssp1 2008-12-18 5.12 accounting

Clone Sequence Records

FI07204.complete Sequence

1318 bp assembled on 2008-08-22

GenBank Submission: BT044309.1

> FI07204.complete
TTATCGAGTTTCTTGCGGGCTCGGGATTTGCTTTGTTTTTTTTTTTTGAA
TCGGTGCGGAAACTTCTCGGTTGAGGTTTTATTCTCTATTTACTGGCCAT
GGACAACGCAAGCTCAACTTTTGGCCAGTCGGACTTCGACTGGGACGCCA
TCAACGTGGGTGACTACCAGTTGGATCACTCCCAGAACTTTTTCGCACGG
GCCAACAAGGAGAACAACAGGAGCCTCAGCAATGTTAACCCCCTCCTGCT
GTGCACCACTCCGCAGAAGATCGGCCGGGAACAGCGCGATGGTGACTTCG
ATGGCAAGCTGATTAGTGCTGGGGATCTCAAGAAGGAGTCCCCCAAAGAC
ACGACAGAGGCGTCCAAGGATGCACTCACTATCAAGCCCAAAGTTGAGCC
CCACGATGTGCCAGAACTCAAGTTGAAAACAGAGCTCCAGGAGCTGGCTC
AAGTGTCCCCACTTGACAACGGCCCAGAGCCGCAGGACGACATCAAACAA
ATTGTTCCGCTCAACTGGGGCAAGGATGGGGACGATGATGAGAAGCACAT
GACGGAGGCCGATCAGCACTTGGTCCACCAGGAACGTCCTCCCGGCGTCG
GGGCCAAGCTCCGCCTGGAGTGGTCACCCCCACGCCACCGCGAGCACGAG
GGAGCCGGCGCCTCTGCCACATCCGCCGCCCCCAAGGCATACCAGTTCAA
GGACGTGTACGAGAGCAAGCGGCAGCAGGCGATGCGCAAGCGCTCCGAGG
AGGAAAGCAAGGCGCGCCAGTTCCACAGCCGACCCATGCCCAACTTTAAG
GCCATGCACAAGCGCATGAACGAGCTGGCAGTCATCCACAAAATCACCGT
CCCGCGCACGCCCGAGACGCTCAAGCACAGCCAGTCGAACGTGGAGCGGC
GTCGCGACGACGATCCGGCCGACCAGGCGCGACTGCATCCGGCTGGTACC
CGCTCCAGACCCTTCCACCTGCGCAGCGAGCAGCGCGTGCGCGACCGACG
CGAGTTCGACGCCGCCGTGCAGGTCAGCCTGGAGCAGAAGAAGAAGGAGG
TAAAGACTAAATCTAGTAGCCCTTAAGCATTGGTTCCGAACACAAGCAGA
TAATTTTCGAGCTCAGGGCCGGAATTTCATTTATGTGATTTATGTGATGT
GTGCTGCTGGTTTAGGTGGTTTCTTAGCAACTGACCGTGTGTTTAGTCAT
TAACTTGAAGAGGCTTAGTTGTTCCTACATTTTTTCAGAATATATTGTTT
AATCCAATGTAATAAACCATTTGCAAATGACCCCCCTTCGAGGGCTCAGT
GCAAAAAAAAAAAAAAAA

FI07204.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:32
Subject Length Description Subject Range Query Range Score Percent Strand
mei-38-RA 1302 mei-38-RA 1..1301 1..1301 6505 100 Plus
CG14782.a 1464 CG14782.a 1..1049 1..1049 5245 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:53:15
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1371277..1372376 195..1301 5190 98.5 Plus
chrX 22417052 chrX 1370996..1371190 1..195 960 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:17:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:53:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1477375..1478481 195..1301 5535 100 Plus
X 23542271 X 1477094..1477288 1..195 975 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1485473..1486579 195..1301 5535 100 Plus
X 23527363 X 1485192..1485386 1..195 975 100 Plus
Blast to na_te.dros performed on 2019-03-16 01:53:13 has no hits.

FI07204.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:54:21 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1370996..1371190 1..195 99 -> Plus
chrX 1371278..1372376 196..1302 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:54:53 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
ssp1-RA 1..978 99..1076 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:10:57 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
mei-38-RA 1..978 99..1076 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:44 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
mei-38-RA 1..978 99..1076 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:39 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
ssp1-RA 1..978 99..1076 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:49:24 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
mei-38-RA 1..978 99..1076 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:07:54 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
ssp1-RA 1..1301 1..1302 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:10:57 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
mei-38-RA 1..1301 1..1302 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:44 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
mei-38-RA 32..1332 1..1302 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-25 10:58:43 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
ssp1-RA 1..1301 1..1302 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:49:24 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
mei-38-RA 32..1332 1..1302 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:54:21 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
X 1477094..1477288 1..195 100 -> Plus
X 1477376..1478481 196..1302 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:54:21 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
X 1477094..1477288 1..195 100 -> Plus
X 1477376..1478481 196..1302 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:54:21 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
X 1477094..1477288 1..195 100 -> Plus
X 1477376..1478481 196..1302 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:44 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1371127..1371321 1..195 100 -> Plus
arm_X 1371409..1372514 196..1302 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:06 Download gff for FI07204.complete
Subject Subject Range Query Range Percent Splice Strand
X 1485474..1486579 196..1302 99   Plus
X 1485192..1485386 1..195 100 -> Plus

FI07204.hyp Sequence

Translation from 98 to 1075

> FI07204.hyp
MDNASSTFGQSDFDWDAINVGDYQLDHSQNFFARANKENNRSLSNVNPLL
LCTTPQKIGREQRDGDFDGKLISAGDLKKESPKDTTEASKDALTIKPKVE
PHDVPELKLKTELQELAQVSPLDNGPEPQDDIKQIVPLNWGKDGDDDEKH
MTEADQHLVHQERPPGVGAKLRLEWSPPRHREHEGAGASATSAAPKAYQF
KDVYESKRQQAMRKRSEEESKARQFHSRPMPNFKAMHKRMNELAVIHKIT
VPRTPETLKHSQSNVERRRDDDPADQARLHPAGTRSRPFHLRSEQRVRDR
REFDAAVQVSLEQKKKEVKTKSSSP*

FI07204.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:28:47
Subject Length Description Subject Range Query Range Score Percent Strand
mei-38-PA 325 CG14781-PA 1..325 1..325 1707 100 Plus
mei-38-PB 326 CG14781-PB 1..326 1..325 1695 99.7 Plus
CG15395-PB 275 CG15395-PB 82..243 193..319 240 33.3 Plus

FI07204.pep Sequence

Translation from 98 to 1075

> FI07204.pep
MDNASSTFGQSDFDWDAINVGDYQLDHSQNFFARANKENNRSLSNVNPLL
LCTTPQKIGREQRDGDFDGKLISAGDLKKESPKDTTEASKDALTIKPKVE
PHDVPELKLKTELQELAQVSPLDNGPEPQDDIKQIVPLNWGKDGDDDEKH
MTEADQHLVHQERPPGVGAKLRLEWSPPRHREHEGAGASATSAAPKAYQF
KDVYESKRQQAMRKRSEEESKARQFHSRPMPNFKAMHKRMNELAVIHKIT
VPRTPETLKHSQSNVERRRDDDPADQARLHPAGTRSRPFHLRSEQRVRDR
REFDAAVQVSLEQKKKEVKTKSSSP*

FI07204.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:17:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20913-PA 261 GF20913-PA 69..261 131..321 416 50.5 Plus
Dana\GF20913-PA 261 GF20913-PA 4..60 6..62 218 68.4 Plus
Dana\GF20593-PA 283 GF20593-PA 88..252 188..320 146 30.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:17:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12862-PA 315 GG12862-PA 1..313 1..323 1228 77.5 Plus
Dere\GG24867-PA 264 GG24867-PA 72..231 193..318 209 31.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17950-PA 311 GH17950-PA 12..298 11..308 382 35.7 Plus
Dgri\GH11157-PA 346 GH11157-PA 81..161 182..261 188 50.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
mei-38-PA 325 CG14781-PA 1..325 1..325 1707 100 Plus
mei-38-PB 326 CG14781-PB 1..326 1..325 1695 99.7 Plus
mei-38-PC 347 CG14781-PC 1..317 1..317 1669 100 Plus
CG15395-PB 275 CG15395-PB 82..243 193..319 240 33.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16488-PA 375 GI16488-PA 208..359 166..317 332 49.7 Plus
Dmoj\GI17863-PA 289 GI17863-PA 101..251 195..318 184 30.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14260-PA 364 GL14260-PA 157..317 165..320 429 51.4 Plus
Dper\GL26567-PA 212 GL26567-PA 35..164 188..305 224 39.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22721-PA 334 GA22721-PA 1..321 1..324 519 40.6 Plus
Dpse\GA13699-PA 210 GA13699-PA 30..164 181..305 224 40.1 Plus
Dpse\GA19123-PA 269 GA19123-PA 75..217 194..307 152 28.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19145-PA 325 GM19145-PA 1..325 1..325 1529 92.6 Plus
Dsec\GM18351-PA 258 GM18351-PA 77..225 204..318 156 29.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23164-PA 274 GD23164-PA 82..241 193..318 217 33.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:17:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16033-PA 326 GJ16033-PA 11..322 10..324 441 39.4 Plus
Dvir\GJ17363-PA 302 GJ17363-PA 107..262 194..317 202 34 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16093-PA 367 GK16093-PA 1..349 1..319 459 39.2 Plus
Dwil\GK19360-PA 180 GK19360-PA 3..143 203..314 146 28.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16693-PA 319 GE16693-PA 1..318 1..324 1249 76.8 Plus
Dyak\GE18165-PA 276 GE18165-PA 84..243 193..318 202 30.6 Plus