Clone FI07211 Report

Search the DGRC for FI07211

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:72
Well:11
Vector:pFlc-1
Associated Gene/Transcriptvir-1-RA
Protein status:FI07211.pep: gold
Sequenced Size:1861

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
vir-1 2008-08-15 Release 5.9 accounting
vir-1 2008-12-18 5.12 accounting

Clone Sequence Records

FI07211.complete Sequence

1861 bp assembled on 2008-08-22

GenBank Submission: BT044312.1

> FI07211.complete
GGTTTTCCGAAACGTTTCATTAAAGCCAACGCACGTTGAAGATCGCGCGT
TCTTCTCCGATCTTTCGAAATCGAGTGATTCAAGCGATCCACAGAAATAA
CTGTATGACACCGAACAAAACTGAACAGAATCGAATCCGGTTGCCGGTCC
ACATCAACGCATCAAAGCTTTCAGCCCTAAATAAACTATACAAATTAAAC
AAATTATAAGCTTGTGAAAAAAAAAAAACCAAACAAAAATGAAGCTCTTG
TTCGGTTTGCTGATGACCGTGCTAGCCCTTAGCGGCGTTTTCACATTGCC
AGCGCGCAACGATCCACAGGACGATGCGGAAGTGATTAAAGTACCATCAC
GCCCTCAGCCCGAATCGGATTTCCATAACTTCCGCGGCGTCATCGATACC
GGCTCTGGTTATCCCTTCCTTCAGCCGAATCCTTCGAGCTTCAATGTGGG
CATCTTCGACTCCTTCGATGATCTCTTCCGCCGTCTGCGCACCCGTTTGT
GGCCTGTAATTGGCAGGGATTCCGGTGAGGAGGGCGCTTCTCCGACTGGC
GACTCTGATGATTCTAGTGATGGCAGCGGAGCAGGCTTTCCATTTGGAGT
GCGTCCTCTGATTCCGCTGGACTCGAAGAACGCCAACACCACTTCCACCA
TTAAGGTTGTCAATGGCCATAAGGTTGAGATCAACGAGACTGTGTATGGT
GATAGCAACAGCGTCTTTAAGGTCCGCTTGGTGAATGTGCGTCCTTTGGA
GAGCGGCGAGGAGGTGGCCCAGGGAGTGCACACCAGTGGAGGTGACTTCC
AGCCGGCGTTGGAGCCCAGCACCTCCGCCCCGCCCAAGAAGTTCGAGGAG
TTCGACGAGGAGGACGACGATGATCGCCGCGAGCCGCTGGAGAAGCAGCC
ACAGGATAACGAGGTGCGCGACATTGATGAGCCCAAGTCCACAACACCAA
CAAACACAAGTTATACAACAAATCTTCACACCAGCGCACCCATAGACTCC
GAATTCGAAGCTTCCGATATCAGTGAGGATATAGTGGAAACTCAACCGGA
AGAGCAAAAGAACACCATGGATCAGCTGCAGCAAATGATGGAACCCCTGC
GAGAGGAGATCAGACATGAGGAAGATTTGGAGCAGGAACACGAGGACAAG
GAGTACTTGGAGAGGAAAGAGAAGAAGGAGCGTGAAGAATTCGATTCCTC
AGACGATGAAGACGGCGAGGCTACAACTCCTGTTGTGATGAGCGAAACCT
TCAATGATGAGTGGGCCGAATTCGATCAGGATCAGGATCGAGAGCACGAT
CGGAATGAGGATCAGGATCATGATTTGGACTTTGAAAACGATCTAAACAA
CGAAATCGATATCGAGGAGAACTTTGTGCCCATTGACCTATCCAACGATA
TAGCCGTCAACGATTTGGCTGCCGCAGATCCCAATTTTCCCATCAATGAA
GATGCCGAGTTCATTGTGCACCCAGCTGTAATCAGAACTATGCCTATGTT
CGAGAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTC
CCACTAGTCTAGGCATTTTCTTTTAGTCTTAACTCAATAGCTTGTAAACA
TAAAACGAGGATATCTCTGAGAGATCCAAAGAAATCGGCGCTCATTTCAT
CCGTAATTTATCCTATTTATTTTCACAGACAACGAGTATTATGTATGCAA
GGTGACATTGAAAATTATTTATTGTTAAAATAAAAGAAATCAAAAATAAG
TGTATTAATATAAATAAGTCTTCGATAATTGGCTTAATTTATAATGAAGT
GCAATAAAATATATGCGATGTCTTTGATAAAACTGACTATTATAGAAAAA
AAAAAAAAAAA

FI07211.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:33
Subject Length Description Subject Range Query Range Score Percent Strand
vir-1-RB 1839 vir-1-RB 1..1839 7..1845 9195 100 Plus
vir-1-RA 1866 vir-1-RA 130..1866 109..1845 8670 99.9 Plus
vir-1.d 1626 vir-1.d 529..1352 114..937 4120 100 Plus
vir-1.d 1626 vir-1.d 432..528 6..102 485 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:05:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12401872..12402781 1845..936 4535 99.9 Minus
chr2L 23010047 chr2L 12405786..12406069 937..654 1420 100 Minus
chr2L 23010047 chr2L 12406149..12406336 657..470 940 100 Minus
chr2L 23010047 chr2L 12420246..12420442 302..109 890 98 Minus
chr2L 23010047 chr2L 12408061..12408231 470..300 855 100 Minus
chr2L 23010047 chr2L 12421935..12422042 113..6 540 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:18:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12403267..12404179 1848..936 4565 100 Minus
2L 23513712 2L 12407185..12407468 937..654 1420 100 Minus
2L 23513712 2L 12421641..12421834 302..109 955 99.5 Minus
2L 23513712 2L 12407548..12407735 657..470 940 100 Minus
2L 23513712 2L 12409456..12409626 470..300 855 100 Minus
2L 23513712 2L 12423323..12423430 113..6 540 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12403267..12404179 1848..936 4565 100 Minus
2L 23513712 2L 12407185..12407468 937..654 1420 100 Minus
2L 23513712 2L 12421641..12421834 302..109 955 99.4 Minus
2L 23513712 2L 12407548..12407735 657..470 940 100 Minus
2L 23513712 2L 12409456..12409626 470..300 855 100 Minus
2L 23513712 2L 12423323..12423430 113..6 540 100 Minus
Blast to na_te.dros performed 2019-03-16 12:05:31
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 1..55 178..232 113 67.3 Plus

FI07211.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:06:31 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12406151..12406335 471..655 100 <- Minus
chr2L 12408061..12408228 303..470 100 <- Minus
chr2L 12401872..12401949 1768..1845 100 == Minus
chr2L 12402007..12402779 938..1710 99 <- Minus
chr2L 12405786..12406067 656..937 100 <- Minus
chr2L 12420246..12420437 114..302 98 <- Minus
chr2L 12421935..12422048 1..113 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:53:55 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RB 1..1296 239..1534 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:10:59 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RB 1..1296 239..1534 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:02:28 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RA 1..1296 239..1534 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:39 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RB 1..1296 239..1534 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:36:08 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RA 1..1296 239..1534 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:53:55 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RB 1..1831 15..1845 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:10:58 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RB 1..1831 15..1845 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:02:28 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RB 3..1849 1..1845 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-25 10:58:45 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RB 1..1831 15..1845 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:36:08 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
vir-1-RB 3..1849 1..1845 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:31 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12403270..12404177 938..1845 100 <- Minus
2L 12407185..12407466 656..937 100 <- Minus
2L 12407550..12407734 471..655 100 <- Minus
2L 12409456..12409623 303..470 100 <- Minus
2L 12421641..12421829 114..302 100 <- Minus
2L 12423323..12423436 1..113 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:31 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12403270..12404177 938..1845 100 <- Minus
2L 12407185..12407466 656..937 100 <- Minus
2L 12407550..12407734 471..655 100 <- Minus
2L 12409456..12409623 303..470 100 <- Minus
2L 12421641..12421829 114..302 100 <- Minus
2L 12423323..12423436 1..113 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:31 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12403270..12404177 938..1845 100 <- Minus
2L 12407185..12407466 656..937 100 <- Minus
2L 12407550..12407734 471..655 100 <- Minus
2L 12409456..12409623 303..470 100 <- Minus
2L 12421641..12421829 114..302 100 <- Minus
2L 12423323..12423436 1..113 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:02:28 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12409456..12409623 303..470 100 <- Minus
arm_2L 12403270..12404177 938..1845 100 <- Minus
arm_2L 12407185..12407466 656..937 100 <- Minus
arm_2L 12407550..12407734 471..655 100 <- Minus
arm_2L 12421641..12421829 114..302 100 <- Minus
arm_2L 12423323..12423436 1..113 97   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:07 Download gff for FI07211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12403270..12404177 938..1845 100 <- Minus
2L 12407185..12407466 656..937 100 <- Minus
2L 12407550..12407734 471..655 100 <- Minus
2L 12409456..12409623 303..470 100 <- Minus
2L 12421641..12421829 114..302 100 <- Minus
2L 12423323..12423436 1..113 97   Minus

FI07211.hyp Sequence

Translation from 238 to 1533

> FI07211.hyp
MKLLFGLLMTVLALSGVFTLPARNDPQDDAEVIKVPSRPQPESDFHNFRG
VIDTGSGYPFLQPNPSSFNVGIFDSFDDLFRRLRTRLWPVIGRDSGEEGA
SPTGDSDDSSDGSGAGFPFGVRPLIPLDSKNANTTSTIKVVNGHKVEINE
TVYGDSNSVFKVRLVNVRPLESGEEVAQGVHTSGGDFQPALEPSTSAPPK
KFEEFDEEDDDDRREPLEKQPQDNEVRDIDEPKSTTPTNTSYTTNLHTSA
PIDSEFEASDISEDIVETQPEEQKNTMDQLQQMMEPLREEIRHEEDLEQE
HEDKEYLERKEKKEREEFDSSDDEDGEATTPVVMSETFNDEWAEFDQDQD
REHDRNEDQDHDLDFENDLNNEIDIEENFVPIDLSNDIAVNDLAAADPNF
PINEDAEFIVHPAVIRTMPMFEKLSLGEPAK*

FI07211.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:29:08
Subject Length Description Subject Range Query Range Score Percent Strand
vir-1-PB 431 CG31764-PB 1..431 1..431 2261 100 Plus
vir-1-PA 431 CG31764-PA 1..431 1..431 2261 100 Plus
vir-1-PG 423 CG31764-PG 1..423 1..431 2200 98.1 Plus
vir-1-PH 234 CG31764-PH 1..233 1..233 1222 100 Plus
vir-1-PC 234 CG31764-PC 1..233 1..233 1222 100 Plus

FI07211.pep Sequence

Translation from 238 to 1533

> FI07211.pep
MKLLFGLLMTVLALSGVFTLPARNDPQDDAEVIKVPSRPQPESDFHNFRG
VIDTGSGYPFLQPNPSSFNVGIFDSFDDLFRRLRTRLWPVIGRDSGEEGA
SPTGDSDDSSDGSGAGFPFGVRPLIPLDSKNANTTSTIKVVNGHKVEINE
TVYGDSNSVFKVRLVNVRPLESGEEVAQGVHTSGGDFQPALEPSTSAPPK
KFEEFDEEDDDDRREPLEKQPQDNEVRDIDEPKSTTPTNTSYTTNLHTSA
PIDSEFEASDISEDIVETQPEEQKNTMDQLQQMMEPLREEIRHEEDLEQE
HEDKEYLERKEKKEREEFDSSDDEDGEATTPVVMSETFNDEWAEFDQDQD
REHDRNEDQDHDLDFENDLNNEIDIEENFVPIDLSNDIAVNDLAAADPNF
PINEDAEFIVHPAVIRTMPMFEKLSLGEPAK*

FI07211.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15675-PA 239 GF15675-PA 1..238 1..233 861 71 Plus
Dana\GF15676-PA 207 GF15676-PA 22..207 245..431 512 63.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10265-PA 227 GG10265-PA 1..226 1..230 895 83.9 Plus
Dere\GG10266-PA 155 GG10266-PA 1..155 277..431 566 83.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:13:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10136-PA 228 GH10136-PA 1..227 1..233 684 62.6 Plus
Dgri\GH10137-PA 221 GH10137-PA 98..216 298..429 259 47.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
vir-1-PB 431 CG31764-PB 1..431 1..431 2261 100 Plus
vir-1-PA 431 CG31764-PA 1..431 1..431 2261 100 Plus
vir-1-PG 423 CG31764-PG 1..423 1..431 2200 98.1 Plus
vir-1-PH 234 CG31764-PH 1..233 1..233 1222 100 Plus
vir-1-PC 234 CG31764-PC 1..233 1..233 1222 100 Plus
vir-1-PE 155 CG31764-PE 1..155 277..431 819 100 Plus
vir-1-PD 155 CG31764-PD 1..155 277..431 819 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22225-PA 411 GI22225-PA 1..403 1..429 997 54.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19505-PA 463 GL19505-PA 16..463 16..431 1107 59.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16459-PA 463 GA16459-PA 16..463 16..431 1148 60.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:13:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26251-PA 431 GM26251-PA 1..431 1..431 1992 96.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:13:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22123-PA 440 GD22123-PA 1..429 1..429 2149 96 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20102-PA 231 GJ20102-PA 16..230 17..233 651 63.5 Plus
Dvir\GJ20113-PA 208 GJ20113-PA 106..202 329..429 260 58.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:13:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14629-PA 419 GK14629-PA 1..400 1..398 923 55.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12315-PA 430 GE12315-PA 1..430 1..431 1620 87.9 Plus